Dgri005989.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- grn
- Assembly
- GCA_018153295.1
- Location
- JAECXY010000311.1:5689303-5711454[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 3.6e-16 58.2 4.7 1 35 298 331 298 332 0.98 2 2 5.1e-19 1.3e-15 56.4 6.3 1 35 358 391 358 392 0.97
Sequence Information
- Coding Sequence
- ATGGATATTATCGCAGGCAGCGATCGATCGCAAGCTGGCAGCAGCCAACCGGGCAACACATCCCGCATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGTCCGCACTTTCATACGCCGCTCAGTCCCTGGCTGACCAGTGAACACAAATCGTTTGCACCCGCCAGTGCCTGGGGCATGGGTCAGTTCGCCTGCCCCCAGGAACCGCAAGTGGAGCACAAACTGGGCCAGGTGGGCCAAAGCCATCAGACGACGGCAGCCGGCCAGCACTCGTTCCCATTCCCACCAACACCGCCAAAGGACTCCACGCCCGACTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTGATGAACGCTTTTATGCACCAGCAGGCCACGGGCTCTACCTCACTGACGGACGCCAGTTGTGCGCTGGATATCAAGCCCTCCATACAGAATGGTGGCGCATCCGCGCACTATGCGGCGAACAATGCGAACAGCTACGACAGCAGCTATGCCTCGTATCACCATGCGGCGGCACAGCATCAAGCGGCTGTTGCTGCGGCCAATATGTTCCAAAGTTCCTCCGTGGCAGCAGCGGCTGTGCGGCATAGCATGGGTGCCGCAGCGGCGGCGGCAGCGCATCACCACCATCATCACAGTCATGGCCATCATCATAGTGCATCCGCCTCCGCCGGTCCGGGTGCGGGTTCCGGCTCAGGTCTGCATGGTGGCGGCGGTGGTGGTGGTGTTGGTGGTATGAGTGGCATGGGCGCTATGAGCAGCGGCGGTCATAGCAGCTCCAGTGGCACTGGCGGCGGCGGCGGCGGCGGTGGAGGTGTTGGTGGTGTTGGTCTCGATGTGAAACCCGTGCGCACAAAGCCCAGGACGAGTGCTGAGGGCCGCGAGTGCGTTAACTGTGGTGCGACCTCAACACCACTGTGGCGACGCGATGGAACTGGACATTATCTGTGCAATGCGTGCGGACTCTACTATAAAATGAATGGACAGAATCGGCCCTTGATCAAGCCAAAGCGAAGACTGACATTACAGTCGCTGCAGAGCGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGCGAACCTGTTTGCAATGCCTGCGGATTGTACTACAAGCTGCACAACGTCAATCGTCCACTTACCATGAAAAAGGAGGGCATACAGACGCGTAATCGCAAGCTCAGCTCCAAGTCGAAGAAGAAAAAGGGCTTGGGCGGCGGCTGTCTACCAATGGGCGGCCATTTGGGCATGGGCGATTTCAAGCCGCTCGATCCATCGAAAGGTTTTGGCGGCGGCTTCTCCGCATCCATGGCGCAACATGGACACCTTTCCAGCGGACTGCATCCGGCACATGCGCATATGCATGGCAGCTGGTATACCGGCGGCATGGGCGCATTGGGTGCCTCCAGTGGACTGCAGGGTGGCTTCTCCACGGCAGGCTCCCTTGGGGGCGGTGTTGTGCCCCACTCTCAGCCCTATCACTTGGGTCTCAGCTCGATGGGCACATGGCGCACAGACTATACGTGA
- Protein Sequence
- MDIIAGSDRSQAGSSQPGNTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGASAHYAANNANSYDSSYASYHHAAAQHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHSHGHHHSASASAGPGAGSGSGLHGGGGGGGVGGMSGMGAMSSGGHSSSSGTGGGGGGGGGVGGVGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565029;
- 90% Identity
- iTF_00599240;
- 80% Identity
- -