Dero011599.1
Basic Information
- Insect
- Deinopsis erosa
- Gene Symbol
- bab1
- Assembly
- GCA_027574845.2
- Location
- JAODFZ020024508.1:3558-5054[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-18 1.4e-14 53.8 0.0 1 43 28 71 28 73 0.95 2 2 1.6 2.5e+03 -1.4 1.2 6 15 157 166 155 180 0.82
Sequence Information
- Coding Sequence
- ATGTGGCAGAAATGTTGGAATACAAATCAGAGTCTCGTCCATAATTTGCGCTTCCGTGAGAGGGGACCTTTGAAATCTTGGCGACCGGAGACAATGGCTGAAGCAATTTTCTCCGTATTAAAAGAAGGTCTATCACTATCCCAAGCAGCTAGAAAATATGATATTCCTTATCCGACGTTTGTACTCTACGCAAATCGTGTTCATAATATGTTGGGTCCTTCAGCTGACGGAGGTTCGGATTTACGGCCGAAAGGTCGGGGGAGACCTCAGAGGATATTATTAGGTGTTTGGCCTGATGAACATATAAGAGGCGTTATACGTGCAGTAGTATTTAGAGATTCGCATCAAATTAAAGAAGAGTCGCACATTGCTTACCCTAGAATGCATgaTGGAGTGAGTGTGCAAAGTTATCCGAATAATTCCTGTAGTAACGGCTCCGATCCGAATGTGTCACCTGGAGCAGCAGCAGCTGCCGCAGTCGCTGCAGTTGCTCATGGACTGCGACAACAAATGTGTAGTATGGTTGCAGCCGCTCAACATGCCAGTACTGCACATGACACAAATCCTGTGGCGAGTTTAGTAAATTCATTAGCTTTGGCTGGTCATTGCGGATCAGTATCATTGCCAAGTAATGGAGTTCCTCCTATGGGCATAAACCAAATGACTTCAATGAGCCATATGACGTCAATGAGAATGGCTAGTCCTGCAGGTAGCATACAAGATTTACGGATAAGTCCTGCTGGATCGGGCTTAGAAAGTCCAATCTCATCACCATTGGGACTGACAGTGTCAAGTACGATGGACAGTGCGTTAAATCTTGGCATGTCGAATAATATGGACGTGGGCAGTATTGGAGTGTCCGGAATGACTTACAAACCTGCTAGATCATTTACATCTCCACGACCTGAGAATCTCTTCCAAGAGGATATTGATGAATTAGTCAAACCGATTCATTCTTCAAATCCTCGCTCCAAAGACACTATGGCTTCCATTAAAATGGAGCCAATGACAGAATGTCGAGGCGAATGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEESHIAYPRMHDGVSVQSYPNNSCSNGSDPNVSPGAAAAAAVAAVAHGLRQQMCSMVAAAQHASTAHDTNPVASLVNSLALAGHCGSVSLPSNGVPPMGINQMTSMSHMTSMRMASPAGSIQDLRISPAGSGLESPISSPLGLTVSSTMDSALNLGMSNNMDVGSIGVSGMTYKPARSFTSPRPENLFQEDIDELVKPIHSSNPRSKDTMASIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_00920588; iTF_01096541; iTF_00049191; iTF_00048560; iTF_00083827; iTF_00902156; iTF_00369489; iTF_01126274; iTF_01058340; iTF_01371035; iTF_01196608; iTF_01400280; iTF_00629718; iTF_00631421;
- 80% Identity
- -