Abil006555.1
Basic Information
- Insect
- Aleochara bilineata
- Gene Symbol
- bab1
- Assembly
- GCA_003054995.1
- Location
- NBZA01005575.1:51253-58866[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-18 1.2e-14 53.6 0.0 1 43 65 108 65 110 0.95 2 2 1.1 2.4e+03 -1.7 1.3 6 15 195 204 193 217 0.86
Sequence Information
- Coding Sequence
- ATGTTGtattgtttcttcttgcagGCTAAGCTCTTGGAATCGTCACACGCATGGCTTGGCGCCTCGACATCTTCGATCGCCGCAGACAGCTATCAGTACCAGCTGCAGTCGATGTGGCAAAAATGTTGGAACACAAACCAGAGTCTCGTCCACAATCTGCGCTTCCGCGAGCGAGGCCCGCTGAAGTCTTGGCGGCCGGAAACGATGGCGGAAGCGATCTTCTCCGTACTTAAGGAAGGATTGTCCTTGTCGCAGGCTGCGCGCAAATACGACATACCGTATCCCACATTCGTGTTGTACGCCAACCGAGTGCACAACATGTTAGGTCCTTCGGCTGACGGAGGTTCGGACTTAAGACCCAAGGGAAGGGGCCGACCGCAGAGAATCCTGCTTGGCGTCTGGCCGGACGAACATATTCGCGGTGTGATTCGTGCAGTGGTATTCCGAGATTCACACCATATAAAAGAAGAACCTCATATTAGTTATCCGCGAATGCATGAAAATGTGAACAACGTACAGaattatcaaacaaacaattgtagTAATGGCTCTGATCCCAATGTGTCTCCTGGTGCAGCCGCCGCGGCGGCAGTTGCTGCAGTTGCCCATGGATTACGGCAGCAAATGTGCAGCATGGTTGCTGCTGCCCAGCATGCCAGCACTGCACATGATACGAACCCAGTGGCGAGTCTTGTGAATTCCCTGGCGCTCGCAGGACACTGCGGCTCCGTCTCGCTGCCTAGCAATGGCATTCCACCTATGAGTATAAACCCAATGACCTCGATGAGTCATATGACTTCGATGAGCCATATGACTTCCATGCGGATGGCAAGTCCGGCGGGCAGCATCCAGGACCTCCGGATAAGTCCTGCGGGCTCCGGCTTGGAGAGTCCGATCTCTTCACCGCTCGGCCTCACCGTATCAAGTACGATGGATAATGCTCTTAATTTGGGTATGAGCAACAACATGGATGTGGGCATTGGCTCCGGCATGACCTACAAGCCAAACCGCGCGAACTTCACCTCACCGCGACCAGAAAACCTCTTCCAGGAAGACATTGATGAGTTGGTGAAACCGATTCATTCAACCACTCCTCGTCCGAAAGACGCTATGGCTTCCATAAAAATGGAGCCTATGACGGAATGTCGAGGCGAATGA
- Protein Sequence
- MLYCFFLQAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHHIKEEPHISYPRMHENVNNVQNYQTNNCSNGSDPNVSPGAAAAAAVAAVAHGLRQQMCSMVAAAQHASTAHDTNPVASLVNSLALAGHCGSVSLPSNGIPPMSINPMTSMSHMTSMSHMTSMRMASPAGSIQDLRISPAGSGLESPISSPLGLTVSSTMDNALNLGMSNNMDVGIGSGMTYKPNRANFTSPRPENLFQEDIDELVKPIHSTTPRPKDAMASIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_00429795;
- 80% Identity
- -