Anig001105.1
Basic Information
- Insect
- Anaulacaspis nigra
- Gene Symbol
- bab1
- Assembly
- GCA_030264675.1
- Location
- JARJDV010000916.1:7338-8541[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-18 1e-14 53.8 0.0 1 43 28 71 28 73 0.95 2 2 1.4 1.9e+03 -1.5 1.2 6 15 158 167 156 181 0.82
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGTTGGAATACCAACCAAAGTCTTGTCCACAACTTGCGCTTCCGCGAACGAGGGCCGTTAAAATCGTGGCGGCCTGAGACCATGGCGGAAGCGATTTTCTCAGTACTTAAGGAGGGATTGTCCTTGTCACAGGCGGCACGAAAGTACGACATCCCCTACCCAACATTTGTATTGTACGCAAACCGAGTGCATAACATGTTAGGTCCTTCAGCCGATGGAGGTTCGGACTTAAGACCCAAGGGAAGGGGACGGCCGCAAAGAATTCTTCTCGGGGTCTGGCCAGATGAGCATATTCGAGGTGTGATTCGTGCGGTTGTCTTCAGAGATTCGCATCACATTAAGGAAGAACCACATGTCAGTTATCCTCGTATACATGAGAATGTGAACAATGTGCAGAATTATCAAGCAAATAATTGCAGTAATGGTTCAGATCCGAATGTATCTCCTggtgccgctgccgccgcagcTGTTGCCGCAGTCGCACACGGATTGCGGCAGCAAATGTGTAGCATGGTGGCGGCAGCCCAGCACGCCAGCACCGCACATGATACGAATCCGGTTGCTAGTTTGGTGAATTCGCTAGCACTTGCAGGACATTGCGGTTCTGTTTCGCTCCCGAGCAATGGCATTCCACCTATGAGTATAAACCAAATGACGTCGATGAGCCACATGACTTCAATGAGTCATATGACATCGATGCGGATGGCAAGTCCTGCCGGTAGCATTCAAGACTTGCGGATAAGTCCGGCCGGTTCCGGATTGGAGAGCCCAATTTCATCACCGTTAGGACTCACGGTGTCCAGTTCGATGGATAACGCTCTCAATTTAGGCATGAGTAATAATATGGATGTTGGTATCGGCTCTGGAATGACCTACAAACCAAATCGCGCTAATTTTACATCGCCGCGACCCGAAAATCTCTTCCAAGAAGACATTGATGAATTGGTCAAACCAATTCATTCATCAACTCCTCGTCCTAAAGACGCTATGGCTTCCATAAAAATGGAACCAATGACGGAATGTCGAGGCGAATGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHHIKEEPHVSYPRIHENVNNVQNYQANNCSNGSDPNVSPGAAAAAAVAAVAHGLRQQMCSMVAAAQHASTAHDTNPVASLVNSLALAGHCGSVSLPSNGIPPMSINQMTSMSHMTSMSHMTSMRMASPAGSIQDLRISPAGSGLESPISSPLGLTVSSSMDNALNLGMSNNMDVGIGSGMTYKPNRANFTSPRPENLFQEDIDELVKPIHSSTPRPKDAMASIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_00429795;
- 80% Identity
- iTF_00049191;