Eara024969.1
Basic Information
- Insect
- Ecitomorpha arachnoides
- Gene Symbol
- bab1
- Assembly
- GCA_027574945.2
- Location
- JAODGD020044524.1:1585979-1587203[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 6.5e-14 51.9 0.0 1 43 28 71 28 73 0.94 2 2 0.8 2.9e+03 -1.4 1.2 6 15 158 167 156 181 0.82
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACGAACCAGAGTCTCGTTCACAATCTACGCTTCCGAGAACGTGGTCCTTTGAAAAGCTGGCGGCCGGAAACGATGGCCGAAGCAATTTTCTCGGTGTTGAAGGAAGGTTTGTCTCTGTCGCAAGCCGCGCGCAAATATGATATCCCGTATCCGACCTTCGTTCTCTACGCAAACCGAATACACAACATGTTAGGTCCGTCTGCCGATGGAGGTTCGGATTTACGGCCCAAAGGGCGGGGGCGGCCTCAGAGAATTCTCTTGGGCGTCTGGCCTGACGAGCACATTCGAGGTGTGATCAGGGCAGTTGTCTTCAGGGATTCTCATCAAATCAAGGAAGAACCGCACGTTGCTTATCCACGCATTCACGAAAACGTCAATACCGTACAAAACTATCCCAGTAACAACTGTAGTAATGGTTCCGACCCGAACGTATCACCAGGAGCAGCGGCTGCCGCAGCAGTAGCCGCCGTCGCGCATGGTCTTCGGCAACAAATGTGCAGCATGGTGGCTGCGGCGCAGCACGCCAGCACGGCGCACGACACGAACCCGGTGGCTAGCCTGGTGAATTCCTTGGCGCTTGCGGGCCACTGCGGTTCGGTGTCCCTGCCCAGTAATGGCATCCCCCCGATGAACATCAGCCAGGTGACGTCGATGAGCCACTTGACCTCGATGCGCATGGCATCGCCTGCCGGGAGCATCCAGGATCTGCGGATCAGTCCTGCCGGTTCCGGTCTTGAGAGCCCAATTGCGTCTCCACTGGGACTCACGGTTTCCAGCAGTATGGACGGAGCGTTGAACCTCGGCATGCCTAATAACATGGACGTTGGCATTGGTTCCGGCATGACGTACAAGCCGAACCGTTCGAATTTCACGTCGCCGCGGCCTGAAAATCTCTTCCAGGAGGACATTGACGAGTTGGTGAAACCGATTCACGCAAGTACACCGTCGCGCCCCAAAGACGCTATGGCTTCCATAAAGATGGAACCGATGACGGAATGTCGAGGCGAATGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRIHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEEPHVAYPRIHENVNTVQNYPSNNCSNGSDPNVSPGAAAAAAVAAVAHGLRQQMCSMVAAAQHASTAHDTNPVASLVNSLALAGHCGSVSLPSNGIPPMNISQVTSMSHLTSMRMASPAGSIQDLRISPAGSGLESPIASPLGLTVSSSMDGALNLGMPNNMDVGIGSGMTYKPNRSNFTSPRPENLFQEDIDELVKPIHASTPSRPKDAMASIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_00429795;
- 80% Identity
- -