Acur005225.1
Basic Information
- Insect
- Aleochara curtula
- Gene Symbol
- bab1
- Assembly
- GCA_963978815.1
- Location
- OZ022217.1:7274234-7284684[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-18 1.2e-14 53.5 0.0 1 43 83 126 83 128 0.95 2 2 1.3 2.4e+03 -1.8 1.3 6 15 213 222 211 235 0.86
Sequence Information
- Coding Sequence
- ATGTCCAAACGGGAACAACAAAACCGCTGTCGGGTATCATCACAGTTGCAGCGGAATACAAAAATAGTCGGTCGGTCGGCTAAGCTATTGGAATCATCGCATGCATGGCTTGGCGCCTCAACATCTTCGATCGCCGCAGACAGCTATCAGTACCAGCTGCAGTCGATGTGGCAAAAGTGTTGGAATACCAACCAAAGTCTTGTCCACAACTTGCGGTTCCGCGAGCGGGGGCCGTTGAAGTCCTGGCGGCCTGAGACCATGGCGGAAGCGATTTTCTCAGTACTTAAGGAAGGATTGTCCTTGTCACAGGCGGCTCGAAAGTACGACATTCCCTACCCGACGTTTGTATTGTACGCAAACCGAGTGCATAACATGCTAGGTCCTTCGGCCGATGGAGGTTCGGACTTAAGACCCAAGGGAAGGGGACGGCCGCAAAGAATTCTTCTTGGAGTCTGGCCTGATGAGCATATTCGGGGTGTGATTCGCGCTGTTGTCTTCAGAGATTCGCATCACATCAAGGAAGAGccacatgtcagttaccctcGTATACATGAGAACGTGAACAATGTGCAGAATTATCAGGCAAACAATTGCAGTAACGGTTCCGACCCGAATGTGTCTCCCGGTGCCGCTGCAGCCGCAGCAGTAGCCGCCGTCGCACACGGATTGCGGCAGCAAATGTGCAGCATGGTAGCGGCAGCCCAGCACGCCAGCACCGCACATGATACGAATCCGGTTGCTAGTTTGGTGAATTCGCTAGCACTTGCAGGACATTGCGGTTCTGTTTCGCTGCCCAGCAATGGCATTCCACCTATGAGTATAAACCAAATGACGTCGATGAGCCACATGACTTCAATGAGTCATATGACATCGATGCGGATGGCAAGTCCTGCCGGCAGCATTCAAGACTTGCGGATAAGTCCGGCTGGTTCCGGACTGGAGAGCCCAATTTCATCGCCATTAGGACTCACCGTGTCCAGTTCGATGGACAATGCACTCAATTTGGGCATGAGTAATAATATGGATGTAGGTATCGGTTCCGGAATGACCTACAAACCAAATCGCGCCAATTTCACATCGCCGCGACCCGAAAATCTCTTCCAAGAAGATATTGATGAATTGGTCAAACCGATTCATTCATCAACTCCTCGTCCTAAAGACGCTATGGCTTCCATAAAAATGGAACCAATGACGGAATGTCGAGGCGAATGA
- Protein Sequence
- MSKREQQNRCRVSSQLQRNTKIVGRSAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHHIKEEPHVSYPRIHENVNNVQNYQANNCSNGSDPNVSPGAAAAAAVAAVAHGLRQQMCSMVAAAQHASTAHDTNPVASLVNSLALAGHCGSVSLPSNGIPPMSINQMTSMSHMTSMSHMTSMRMASPAGSIQDLRISPAGSGLESPISSPLGLTVSSSMDNALNLGMSNNMDVGIGSGMTYKPNRANFTSPRPENLFQEDIDELVKPIHSSTPRPKDAMASIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- iTF_00429795;
- 80% Identity
- iTF_00083827;