Basic Information

Insect: Deilephila porcellus
Gene Symbol: -
Assembly: GCA_905220455.1
Location: LR999980.1:5073593-5089937[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.8e-05 0.0058 17.4 2.2 1 23 443 465 443 465 0.97

2 20 0.0041 0.3 12.0 0.6 1 20 471 490 471 493 0.94

3 20 7.7e-05 0.0057 17.4 4.4 1 23 512 534 512 534 0.97

4 20 9.5e-05 0.007 17.1 4.1 1 23 540 562 540 562 0.99

5 20 3.6e-05 0.0027 18.5 5.3 1 23 568 590 568 590 0.97

6 20 9.2e-06 0.00068 20.3 7.9 1 23 596 618 596 618 0.97

7 20 7e-07 5.2e-05 23.9 2.9 1 23 624 646 624 646 0.97

8 20 9.9e-05 0.0073 17.1 6.7 1 23 652 674 652 674 0.97

9 20 9.8e-05 0.0073 17.1 6.5 1 23 680 702 680 702 0.97

10 20 4.7e-07 3.5e-05 24.4 1.9 1 23 708 730 708 730 0.98

11 20 4.8e-05 0.0036 18.1 7.9 1 23 736 758 736 758 0.98

12 20 2.5e-05 0.0018 19.0 6.6 1 23 764 786 764 786 0.98

13 20 1.6e-06 0.00012 22.8 5.4 1 23 792 814 792 814 0.98

14 20 2.5e-05 0.0019 19.0 5.4 1 23 820 842 820 842 0.96

15 20 3.2e-06 0.00024 21.8 6.9 1 23 848 870 848 870 0.98

16 20 3e-06 0.00022 21.9 6.0 1 23 876 898 876 898 0.98

17 20 1.7e-05 0.0013 19.5 8.1 1 23 904 926 904 926 0.97

18 20 1.3e-05 0.00095 19.9 3.2 1 23 932 954 932 954 0.96

19 20 0.00037 0.027 15.3 0.4 1 23 961 983 961 983 0.96

20 20 0.24 18 6.4 5.6 1 23 990 1012 990 1012 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.8e-05	0.0058	17.4	2.2	1	23	443	465	443	465	0.97
2	20	0.0041	0.3	12.0	0.6	1	20	471	490	471	493	0.94
3	20	7.7e-05	0.0057	17.4	4.4	1	23	512	534	512	534	0.97
4	20	9.5e-05	0.007	17.1	4.1	1	23	540	562	540	562	0.99
5	20	3.6e-05	0.0027	18.5	5.3	1	23	568	590	568	590	0.97
6	20	9.2e-06	0.00068	20.3	7.9	1	23	596	618	596	618	0.97
7	20	7e-07	5.2e-05	23.9	2.9	1	23	624	646	624	646	0.97
8	20	9.9e-05	0.0073	17.1	6.7	1	23	652	674	652	674	0.97
9	20	9.8e-05	0.0073	17.1	6.5	1	23	680	702	680	702	0.97
10	20	4.7e-07	3.5e-05	24.4	1.9	1	23	708	730	708	730	0.98
11	20	4.8e-05	0.0036	18.1	7.9	1	23	736	758	736	758	0.98
12	20	2.5e-05	0.0018	19.0	6.6	1	23	764	786	764	786	0.98
13	20	1.6e-06	0.00012	22.8	5.4	1	23	792	814	792	814	0.98
14	20	2.5e-05	0.0019	19.0	5.4	1	23	820	842	820	842	0.96
15	20	3.2e-06	0.00024	21.8	6.9	1	23	848	870	848	870	0.98
16	20	3e-06	0.00022	21.9	6.0	1	23	876	898	876	898	0.98
17	20	1.7e-05	0.0013	19.5	8.1	1	23	904	926	904	926	0.97
18	20	1.3e-05	0.00095	19.9	3.2	1	23	932	954	932	954	0.96
19	20	0.00037	0.027	15.3	0.4	1	23	961	983	961	983	0.96
20	20	0.24	18	6.4	5.6	1	23	990	1012	990	1012	0.99

Sequence Information

Coding Sequence: ATGAATCCGGAACATCATAATATAAATACGGGTGGGGGCCAGCCTCCTGGATCCACAGAGTCTCAGAATCAAAGAGTGCAATCTGCACAACAACAGCAACAGAGTAATTTGACGCCCACCACGTCTGCAACGGACCTGCGAGTGAACTCTGCTGCAGTAAACGTTGCTTTGTCTAGCGTCGCAAAATACTGGGTGTTTACAAATTTATTCCCCGGCCCCATCCCGCAAGTCTCCGTCTACGGACTACCCACTGGCACTAGGATTGAAAATGGAAAACCAGTTCAGGATCTTGGACAAGCACATGCGAGTATACTCAATGGAGACCCAAATATACTGCTTGGACATCATGGAGCTCAGCCACAGGTCACTGTGTCTGCGTCGGGAGCCCAGCAGATACCGGTCTCTCAAATCATAGCTACACAGTCTGGACAATCACATGACGCGCTGGTGGGGCACGCGGCGCAGGAGCTGGGCGGCGCGGCGGGCGGCGCGGCGGGCGTGAGCGCGGCGCCCTCGCACCACCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGACACCATTCCCAACAACATTTAATGCAGCAGCAATTAATGGCGACGACGCGACAAGATCATCCCAACCAACAAATTCAATTAACGGTCAGTGAGGACGGCATAGTGACGGTTGTGGAACCTGGCGGCGGCAAAATGGTCGATAAAGAAGAACTACATGAAGCCATCAAATTGCCCAACGATCACACGCTCACTGTCCATCAGCTGCAACAAATTGTGGGGCAGCAGGTGATAGACAGCGTGGTGCGCATCGAGCAAGCTACAGGCGAGCCCGCCAACATCCTCGTCACGCACAACGCGGACGGCACCACCTCCATCGAGGCCAGCGCCGCCGACCACGCCACGCACGCCGCGCACGCCACGCACGCCGACCACGCCGCGCACAACGCACACGCCGCGCACGCAGACCACGCGCCCCTCGTCAAGGACGAGAAGGCGCAGCCCAAGATCGACGCGCAGTTCGCCATTCCCGCTGAGATCAAGGACATCAAGGGCATCGACCTAAAGACTGTGGGGGCAATGGGCATGGAAGGTGCTGTCGTGAAGATATCTGCCGGTGCGTCGGACCATGACATGCACGCCATGTACAAAGTTAACGTCGAAGATCTCTCACAATTATTAGCATATCATGAAGTCTTCGGAAAATTAAATTCCGAAGGACAGCCACAGCAACAAGCAAAGGTAATAAGTGAGGTGGAAGTCGAAGCGGGAACAAGTGCAGCCATGTCAGAAACAGAATCGTCGCCGGGACACCACTCATGTGATATTTGCGGCAAAATATTCCAGTTCCGATATCAACTGATTGTTCACAGGCGATATCATGGTGAAAGCAAGCCTTTTACATGCCAAGTATGTGGCTCAGCTTTCGCCAACCCTGTGGAGTTATCAAGACATGGAAAATGCCATCTTGCCGGTGATCCCTCAGAACGACATGCCAAGAGATTGACGCAGGATAAGCCATATGCGTGTACTGCTTGCCATAAAACATTTTCAAGAAAAGAGCATCTTGACAATCATGTCAGAAGTCACACAGGAGAAACTCCATACAGATGTGAATTCTGCGCGAAGACGTTCACTCGGAAGGAGCACATGGTGAACCACGTACGGAAACACACCGGAGAGACTCCACATCGATGCGACATCTGCAAGAAGAGCTTCACCAGAAAAGAGCACTTCATGAATCACGTCATGTGGCACACGGGTGAAACGCCGCACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCATTTAATGAACCATATGAGATCTCACACGAACGATACACCATTCAGGTGTGAACTGTGCGGCAAGTCGTTTACGAGGAAGGAACACTTCACCAATCACATATTGTGGCATACGGGTGAAACCCCGCACCGGTGCGATTTCTGTTCGAAGACCTTCACTCGCAAGGAGCATTTGTTGAACCACGTGCGCCAACACACGGGCGAGTCGCCGCACCGATGCAACTTCTGCTCCAAGTCCTTCACGCGCCGCGAACACCTCGTCAACCACGTGCGACAACATACCGGAGAGACGCCCTTCCAGTGTGGCTACTGCCCTAAGGCGTTCACACGGAAGGACCATCTAGTGAACCACGTACGGCAACACACGGGCGAGTCGCCGCACAAGTGTTCGTTCTGCACGAAGTCGTTCACTCGCAAGGAGCACCTCACCAACCACGTGCGCCAACACACGGGCGAGTCGCCGCACCGCTGCACATACTGCGCCAAGTCCTTCACCAGGAAGGAACATCTCACCAACCATGTCAGACAGCACACGGGCGAAACTCCACACAAGTGCACCTACTGCCCGCGCGCCTTCACGCGCAAGGAACATCTCAACAACCACATCCGACAACACACCGGCGTCACGCCGCACGCCTGTACCTACTGCACCAAGACCTTCACCAGGAAGGAGCATCTCGTTAACCACGTCAGACAACACACGGGCGAGACTCCGTTCAAATGCACATACTGCTCAAAGTCATTCTCACGTAAAGAACACCTGACCAATCATATACACATCCACACCGGGGAGACCCCACACAAATGCCCCTTCTGTACTAAGACATTCTCAAGAAAGGAGCATCTTACCAACCACGTTAGAATCCACACGGGAGAGTCGCCGCATCGGTGCGATTTCTGCCAGAAAACGTTTACGAGGAAAGAGCACTTGACGAACCACATGAAGCAACACACGGGCGACACGGCGCACGCGTGCAAGATCTGCTCCAAACCCTTCGCGAAGAAAGAACACCTTGTTACGCATATGAGATCACACAGTTGTGGAGAAAGGCCGTTTAGCTGTGAAGAATGTGGGAAATCTTTCCCGCTGAAAGGAAACTTATTGTTCCATGAACGATCGCACAATAAAGGCGCTCGGCCATATCGGTGCGATATTTGTTCCAAGAATTTCTTATGTAAAGGGCATTTAGTGTCACACCGGCGCACGCACGCGGAGGCGGGGGAGACGCCGCCCAGCGGAGACACGCCGGCCGCCACCGACGACTGTACCGATTGCAACAAGTGCGTCAAGATTGAAGTCGACACGCCAGAGAGAAAACACGAAATCAGAGCGGCAGTTGAAAATCGACCTGCTGAAAACAGTGTACCGCCACCGCAACAAAATAATGCTGCTGTTATGCAAATAAATAATCAAGTAAATCAGCAACAAGTCCGGTCAGTAACCGTGGCGAGTTCGCAAGCGGTGACCACTGGCACGTTCACCCACGCGCCCAGCACCCAGCACCACGCCGGGACCGCCATCGGCCACCATCCCGTCACTGTTAATTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSTESQNQRVQSAQQQQQSNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNILLGHHGAQPQVTVSASGAQQIPVSQIIATQSGQSHDALVGHAAQELGGAAGGAAGVSAAPSHHQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMATTRQDHPNQQIQLTVSEDGIVTVVEPGGGKMVDKEELHEAIKLPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNADGTTSIEASAADHATHAAHATHADHAAHNAHAAHADHAPLVKDEKAQPKIDAQFAIPAEIKDIKGIDLKTVGAMGMEGAVVKISAGASDHDMHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQQQAKVISEVEVEAGTSAAMSETESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPSERHAKRLTQDKPYACTACHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFTRKEHLNNHIRQHTGVTPHACTYCTKTFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHIHIHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGDTAHACKICSKPFAKKEHLVTHMRSHSCGERPFSCEECGKSFPLKGNLLFHERSHNKGARPYRCDICSKNFLCKGHLVSHRRTHAEAGETPPSGDTPAATDDCTDCNKCVKIEVDTPERKHEIRAAVENRPAENSVPPPQQNNAAVMQINNQVNQQQVRSVTVASSQAVTTGTFTHAPSTQHHAGTAIGHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01430115; iTF_00820299; iTF_00428342; iTF_00819384; iTF_01010596; iTF_00063787; iTF_00859692; iTF_00290893; iTF_00341524; iTF_00787863; iTF_01359063; iTF_00858776;
80% Identity: -