Basic Information

Insect: Hyles lineata
Gene Symbol: -
Assembly: GCA_030180105.1
Location: JARJEE010000016.1:1759578-1776539[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.2e-05 0.0066 17.4 2.2 1 23 443 465 443 465 0.97

2 20 0.0048 0.34 12.0 0.6 1 20 471 490 471 493 0.94

3 20 9.1e-05 0.0065 17.4 4.4 1 23 512 534 512 534 0.97

4 20 0.00011 0.008 17.1 4.1 1 23 540 562 540 562 0.99

5 20 4.2e-05 0.003 18.5 5.3 1 23 568 590 568 590 0.97

6 20 1.1e-05 0.00078 20.3 7.9 1 23 596 618 596 618 0.97

7 20 8.2e-07 5.9e-05 23.9 2.9 1 23 624 646 624 646 0.97

8 20 0.00012 0.0084 17.1 6.7 1 23 652 674 652 674 0.97

9 20 0.00012 0.0083 17.1 6.5 1 23 680 702 680 702 0.97

10 20 5.6e-07 4e-05 24.4 1.9 1 23 708 730 708 730 0.98

11 20 5.7e-05 0.0041 18.1 7.9 1 23 736 758 736 758 0.98

12 20 9.1e-06 0.00065 20.6 6.6 1 23 764 786 764 786 0.98

13 20 1.8e-06 0.00013 22.8 5.4 1 23 792 814 792 814 0.98

14 20 1.1e-05 0.00079 20.3 5.3 1 23 820 842 820 842 0.96

15 20 3.7e-06 0.00027 21.8 6.9 1 23 848 870 848 870 0.98

16 20 3.5e-06 0.00025 21.9 6.0 1 23 876 898 876 898 0.98

17 20 2e-05 0.0014 19.5 8.1 1 23 904 926 904 926 0.97

18 20 3.7e-06 0.00027 21.8 3.1 1 23 932 954 932 954 0.96

19 20 0.00044 0.032 15.3 0.4 1 23 961 983 961 983 0.96

20 20 0.29 20 6.4 5.6 1 23 990 1012 990 1012 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.2e-05	0.0066	17.4	2.2	1	23	443	465	443	465	0.97
2	20	0.0048	0.34	12.0	0.6	1	20	471	490	471	493	0.94
3	20	9.1e-05	0.0065	17.4	4.4	1	23	512	534	512	534	0.97
4	20	0.00011	0.008	17.1	4.1	1	23	540	562	540	562	0.99
5	20	4.2e-05	0.003	18.5	5.3	1	23	568	590	568	590	0.97
6	20	1.1e-05	0.00078	20.3	7.9	1	23	596	618	596	618	0.97
7	20	8.2e-07	5.9e-05	23.9	2.9	1	23	624	646	624	646	0.97
8	20	0.00012	0.0084	17.1	6.7	1	23	652	674	652	674	0.97
9	20	0.00012	0.0083	17.1	6.5	1	23	680	702	680	702	0.97
10	20	5.6e-07	4e-05	24.4	1.9	1	23	708	730	708	730	0.98
11	20	5.7e-05	0.0041	18.1	7.9	1	23	736	758	736	758	0.98
12	20	9.1e-06	0.00065	20.6	6.6	1	23	764	786	764	786	0.98
13	20	1.8e-06	0.00013	22.8	5.4	1	23	792	814	792	814	0.98
14	20	1.1e-05	0.00079	20.3	5.3	1	23	820	842	820	842	0.96
15	20	3.7e-06	0.00027	21.8	6.9	1	23	848	870	848	870	0.98
16	20	3.5e-06	0.00025	21.9	6.0	1	23	876	898	876	898	0.98
17	20	2e-05	0.0014	19.5	8.1	1	23	904	926	904	926	0.97
18	20	3.7e-06	0.00027	21.8	3.1	1	23	932	954	932	954	0.96
19	20	0.00044	0.032	15.3	0.4	1	23	961	983	961	983	0.96
20	20	0.29	20	6.4	5.6	1	23	990	1012	990	1012	0.99

Sequence Information

Coding Sequence: ATGAATCCGGAACACCATAATATAAATACGGGTGGTGGCCAGCCTCCTGGATCCACAGAGTCTCAGAATCAGAGAGTGCAATCTGCACAACAACAGCAACAGAGTAATTTGACGCCCACCACGTCTGCAACCGACCTGCGAGTGAACTCTGCTGCAGTAAACGTTGCTTTGTCTAGCGTCGCAAAATATTGGGtgtttacaaatttatttccCGGCCCCATCCCGCAAGTCTCCGTTTATGGGCTACCCACTGGCACCAGGATTGAAAATGGAAAACCAGTTcagGATCTCGGACAAGCACATGCAAGTATACTCAATGGTGACCCAAACATACTGCTTGGACATCATGGAGCACAGCCGCAGGTTACTGTGTCTGCATCAGGAGCCCAGCAGATACCTGTCTCACAAATCATAGCTACACAGTCTGGACAATCACATGAAGCGCTGGTGGGGCACGGCGCGGGCGAgctgggcggcgcggcgggcggcggcgcgggcgcggcggccgtGAGCGCGGCGCCGCCCTCCCACCACCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGggacaCCATTCACAACAACATTTGATGCAGCAACAATTAATGGCGACGACGCGACAAGATCATCCCAACCAACAAATTCAATTAACGGTCAGTGAAGATGGCATAGTGACAGTAGTGGAGCCAGGCGGCGGCAAAATGGTTGATAAAGAAGAACTGCATGAAGCCATCAAATTGCCCAACGATCACACGCTCACTGTCCATCAGCTGCAACAAATTGTGGGGCAGCAGGTGATAGACAGCGTGGTGCGCATCGAGCAGGCGACAGGCGAGCCCGCCAACATCCTCGTCACACACAACGCCGACGGCACCACCTCCATCGAGGCCAGCGCCGCCGACCACGCCGACCACGCGCATGCGCCGCACGCaccgcacgcgccgcacgcACCCCACACCGACCACGCGCCACTAGTCAAGGACGAGAAGGCGCAGCCCAAGATCGACGCGCAGTTCGCCATACCTGCCGAGATCAAGGACATCAAGGGCATTGACCTTAAGACTGTGGGAGCAATGGGTATGGAAGGAGCTGTCGTGAAAATATCTGCCGGTGCGTCGGAGCATGACATGCACGCCATGTACAAAGTTAATGTCGAAGATCTGTCACAATTATTAGCATATCATGAAGTATTCGGAAAGTTAAATTCTGAAGGACAGCCACAGCAACAAGCAaaggtaataAGTGAAGTGGAAGTCGAAGCCGGAACAAGCGCAGCCATGTCAGAAACAGAATCTTCGCCAGGACATCACTCGTGTGACATTTGCggcaaaatatttcaattccgATATCAACTGATCGTTCACAGACGATACCACGGTGAAAGCAAGCCTTTTACGTGCCAAGTATGTGGCTCAGCTTTCGCCAACCCTGTGGAATTATCAAGACACGGAAAATGCCATCTTGCCGGTGATCCCTCAGAACGACACGCCAAGAGATTGACGCAAGATAAGCCATATGCATGTACCGCATGCCATAAAACTTTTTCAAGAAAGGAGCATCTTGATAATCATGTGAGAAGTCACACAGGAGAGACTCCATACagATGTGAGTTCTGCGCGAAGACGTTCACTCGCAAGGAGCACATGGTGAACCACGTGCGGAAACACACTGGAGAGACGCCGCACCGATGCGACATCTGCAAGAAGAGCTTCACCAGAAAGGAACACTTCATGAACCACGTCATGTGGCATACGGGTGAAACGCCGCACCATTGTCAAATATGCGGGAAGAAGTATACTAGGAAGGAGCATTTAATGAACCATATGAGATCTCACACGAACGATACACCGTTCAGGTGTGAACTGTGCGGCAAGTCGTTTACGAGGAAGGAACACTTCACCAATCACATATTGTGGCATACGGGTGAAACACCGCACCGATGCGACTTCTGTTCGAAGACGTTCACTCGCAAGGAGCACTTGTTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCCTTCACGCGCCGCGAACACCTCGTCAACCACGTGCGACAACACACCGGCGAGACGCCCTTCCAGTGCGGATACTGCCCCAAGGCGTTCACACGGAAGGACCATCTAGTGAACCACGTGAGGCAGCATACCGGCGAGTCGCCGCACAAGTGTTCGTTCTGCACGAAGTCGTTCACTCGCAAGGAGCACCTCACGAATCACGTGCGACAGCACACGGGCGAGTCCCCGCACCGTTGCACGTACTGCGCCAAGTCCTTCACGCGCAAGGAACACCTTACCAACCATATCAGACAGCACACGGGCGAAACACCACACAAGTGCACCTACTGCCCGCGCGCCTTCACGCGCAAGGAACATCTCAACAACCACATCCGACAGCACACCGGCGTCACGCCGCACGCCTGCACCTACTGCAACAAGACATTCACCAGGAAGGAGCATCTAGTTAACCACGTCAGACAACACACGGGCGAGACTCCGTTCAAATGCACGTACTGCTCAAAGTCATTCTCACGTAAAGAACACCTGACCAATCACATACACATCCACACCGGGGAGACCCCACACAAATGTCCCTTCTGTACTAAGACATTCTCGAGAAAGGAGCATCTTACCAACCACGTTAGAATTCACACGGGAGAGTCGCCGCATCGGTGTGATTTCTGCCAGAAAACGTTTACGAGAAAAGAACATTTGACGAACCACATGAAGCAGCACACGGGCGATACGGCGCACGCGTGCAAGATCTGCTCCAAGCCTTTCGCGAGGAAAGAACACCTTGTTACGCATATGAGATCACACAGTTGTGGAGAAAGGCCGTTTAGCTGTGATGAATGTGGGAAATCTTTCCCGCTGAAAGGAAACTTATTATTCCATGAACGATCGCACAATAAAGGCGCGCGGCCATATCGCTGCGATATTTGTTCCAAGAATTTCTTATGTAAAGGGCATTTAGTGTCGCACCGGCGCACGCACGCGGAGGCGGGAGAGACGCCGCCCAGCGGAGACACGCCGGCCGGCACCGACGACTGTACCGATTGCAACAAATGCGTCAAGATTGAAGCCGACGCGCCAGAGAGGAAACACGATATCAGAGCCGCAGTTGAAAATCGACCTGCTGAAAACAGTGTACCGGCACCGCAACAAAACAATGCAGCtgttatgcaaataaataatcaagTAAATCAGCAACAAGTCCGGTCAGTGACGGTGACGAGTGCGCAAGGGGTGACCACCGGCACATTCACACACACGCCCAGCACCCAGCACCACGCCGGGACTGCCATCGGCCACCATCCCGTCACTGTTAATTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSTESQNQRVQSAQQQQQSNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNILLGHHGAQPQVTVSASGAQQIPVSQIIATQSGQSHEALVGHGAGELGGAAGGGAGAAAVSAAPPSHHQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMATTRQDHPNQQIQLTVSEDGIVTVVEPGGGKMVDKEELHEAIKLPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNADGTTSIEASAADHADHAHAPHAPHAPHAPHTDHAPLVKDEKAQPKIDAQFAIPAEIKDIKGIDLKTVGAMGMEGAVVKISAGASEHDMHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQQQAKVISEVEVEAGTSAAMSETESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPSERHAKRLTQDKPYACTACHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFTRKEHLNNHIRQHTGVTPHACTYCNKTFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHIHIHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGDTAHACKICSKPFARKEHLVTHMRSHSCGERPFSCDECGKSFPLKGNLLFHERSHNKGARPYRCDICSKNFLCKGHLVSHRRTHAEAGETPPSGDTPAGTDDCTDCNKCVKIEADAPERKHDIRAAVENRPAENSVPAPQQNNAAVMQINNQVNQQQVRSVTVTSAQGVTTGTFTHTPSTQHHAGTAIGHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00429225;
80% Identity: -