Basic Information

Insect: Cephonodes hylas
Gene Symbol: -
Assembly: GCA_030295005.1
Location: AP025368.1:4788782-4804975[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.1e-05 0.0059 17.4 2.2 1 23 425 447 425 447 0.97

2 20 0.0042 0.3 12.0 0.6 1 20 453 472 453 475 0.94

3 20 8e-05 0.0058 17.4 4.4 1 23 494 516 494 516 0.97

4 20 9.9e-05 0.0071 17.2 4.1 1 23 522 544 522 544 0.99

5 20 3.8e-05 0.0027 18.5 5.3 1 23 550 572 550 572 0.97

6 20 1.2e-05 0.00083 20.1 7.3 1 23 578 600 578 600 0.97

7 20 7.3e-07 5.2e-05 23.9 2.9 1 23 606 628 606 628 0.97

8 20 0.0001 0.0074 17.1 6.7 1 23 634 656 634 656 0.97

9 20 0.0001 0.0073 17.1 6.5 1 23 662 684 662 684 0.97

10 20 4.9e-07 3.6e-05 24.4 1.9 1 23 690 712 690 712 0.98

11 20 4.8e-05 0.0035 18.1 8.1 1 23 718 740 718 740 0.98

12 20 8e-06 0.00058 20.6 6.6 1 23 746 768 746 768 0.98

13 20 7.3e-06 0.00052 20.7 5.4 1 23 774 796 774 796 0.98

14 20 3.5e-05 0.0025 18.6 5.2 1 23 802 824 802 824 0.96

15 20 7.5e-06 0.00054 20.7 7.2 1 23 830 852 830 852 0.97

16 20 3.1e-06 0.00022 21.9 6.0 1 23 858 880 858 880 0.98

17 20 1.7e-05 0.0012 19.6 8.0 1 23 886 908 886 908 0.97

18 20 3.3e-06 0.00024 21.8 3.1 1 23 914 936 914 936 0.96

19 20 0.00055 0.04 14.8 0.3 1 23 943 965 943 965 0.96

20 20 0.25 18 6.4 5.6 1 23 972 994 972 994 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.1e-05	0.0059	17.4	2.2	1	23	425	447	425	447	0.97
2	20	0.0042	0.3	12.0	0.6	1	20	453	472	453	475	0.94
3	20	8e-05	0.0058	17.4	4.4	1	23	494	516	494	516	0.97
4	20	9.9e-05	0.0071	17.2	4.1	1	23	522	544	522	544	0.99
5	20	3.8e-05	0.0027	18.5	5.3	1	23	550	572	550	572	0.97
6	20	1.2e-05	0.00083	20.1	7.3	1	23	578	600	578	600	0.97
7	20	7.3e-07	5.2e-05	23.9	2.9	1	23	606	628	606	628	0.97
8	20	0.0001	0.0074	17.1	6.7	1	23	634	656	634	656	0.97
9	20	0.0001	0.0073	17.1	6.5	1	23	662	684	662	684	0.97
10	20	4.9e-07	3.6e-05	24.4	1.9	1	23	690	712	690	712	0.98
11	20	4.8e-05	0.0035	18.1	8.1	1	23	718	740	718	740	0.98
12	20	8e-06	0.00058	20.6	6.6	1	23	746	768	746	768	0.98
13	20	7.3e-06	0.00052	20.7	5.4	1	23	774	796	774	796	0.98
14	20	3.5e-05	0.0025	18.6	5.2	1	23	802	824	802	824	0.96
15	20	7.5e-06	0.00054	20.7	7.2	1	23	830	852	830	852	0.97
16	20	3.1e-06	0.00022	21.9	6.0	1	23	858	880	858	880	0.98
17	20	1.7e-05	0.0012	19.6	8.0	1	23	886	908	886	908	0.97
18	20	3.3e-06	0.00024	21.8	3.1	1	23	914	936	914	936	0.96
19	20	0.00055	0.04	14.8	0.3	1	23	943	965	943	965	0.96
20	20	0.25	18	6.4	5.6	1	23	972	994	972	994	0.99

Sequence Information

Coding Sequence: ATGAATCCAGAACACCATAATATTAATACGGGTGGTGGCCAGCCCCCTGGAAGTGCAGAGTCTCAGAATCAAAGAGTGCAAAGTGCTCAACAACAGCAACAGAGTAATTTGACGCCCACGACATCTGCCACTGACCTGCGAGTAAACTCTGCAGCAGTTAACGTTGCTTTGTCTAGCGTCGCAAAATATTGGGTGTTTACAAATTTATTCCCCGGACCTATTCCACAAGTCTCTGTTTATGGCCTACCAACGGGGACTAGAATTGAAAATGGAAAACCAGTCCAGGATCTTGGTCAAGCACATGCCAGTATACTGAATGGAGATCCTAATATATTACTTGGACACCATGGAGCGCAGCCACAGGTCACTGTTTCTGCATCCGGAGCTCAACAGATACCTGTTTCACAAATTATTGCTACTCAATCTGGACAAACACATGaAGCGCTGGTGGGTCACAGCCAGCAGCAAGAACTACCGGGTGCACAGAGCGCGTCTGGTGGCGCTCAGTCCGTGAGTTCGGGCCAGACCTCCCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACCACACCATAACATTGATATGGGCCACCATTCCCAGCAGCATATGATGCAGCAACAACTGATGGCATCCACACGACAAGACCACCCTAATCAAcaaATTCAGCTAACAGTAAGTGAAGATGGTATAGTCACCGTGGTGGAGCCAGGCGGCGGCAAAATGGTCGATAAAGAAGAATTACATGAAGCCATCAAATTACCAAACGATCACACATTGACAGTCCATCAGTTGCAACAAATAGTAGGACAACagGTGATCGACAGCGTGGTGCGCATCGAGCAGGCGACGGGCGAGCCGGCCAACATCCTGGTGACGCACAACGCGGACGGCACCACGTCCATCGAGGCCAGCGCCGGCGACCACGCGCCGCTGCCCGTCGTCAAGGACGAGAACAAGCAGCCCAAGCTCGACGCGCAGTTCCTGCAGCCCGACATCAAGGACATCAAGGGCATCGACCTCAAGACTGTGGGAGCGATGGGAATGGAAGGTGCAGTTGTCAAGATATCCGCCGGTGCGTCAGAACATGACATGCACGCCATGTACAAAGTAAACGTCGAAGATCTTTCACAATTGTTAGCCTATCATGAAGTGTTtggaaaattaaattctgaAGGACAACCGCAGCAACAGGCGAAGGTAATCAATGAAGTGGAAGTGGAGGCGGGAACGAGCGCTGCAATGTCCGAACCAGAATCTTCCCCCGGCCATCACTCCTGCGACATATGCGGGAAAATATTCCAGTTCCGATATCAACTGATTGTTCACAGACGGTACCACGGCGAGAGCAAACCCTTCACTTGCCAAGTATGTGGCTCAGCATTCGCCAACCCCGTGGAGTTGTCGAGACACGGGAAATGCCATCTTGCCGGAGACCCAACAGAACGGAATACCAAAAGATTGACCCAAGATAAGCCATATGCCTGTACGGCTTGTCATAAAACGTTTTCAAGAAAAGAGCATCTTGATAACCATGTAAGAAGTCACACTGGAGAGACCCCTTACAGATGCGAGTTCTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGTAACGCCGCACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCGCATACGAACGATACACCGTTCAGGTGTGAACTGTGCGGCAAATCGTTTACAAGGAAGGAACACTTCACCAATCACATACTGTGGCATACGGGCGAGACGCCGCATCGATGCGACTTCTGTTCGAAGACGTTCACCCGCAAGGAGCACCTGCTGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTCACGCGGCGCGAGCACCTCGTCAACCACGTGCGGCAACACACCGGCGAGACACCCTTCCAGTGCGGATACTGCCCCAAGGCATTCACCAGGAAGGACCATCTAGTGAACCACGTGCGACAGCACACGGGCGAGTCGCCGCACAAGTGTACGTTCTGCACGAAGTCGTTCACGCGCAAGGAGCACCTCACCAACCACGTGCGCCAACACACGGGCGAGTCGCCGCACCGCTGCACCTACTGCGCCAAGAGCTTCACACGGAAAGAACACCTCACTAACCATATCAGACAGCACACGGGCGAAACTCCACATAAGTGCACGTTCTGCCCGCGCGCCTTCTCGCGCAAGGAACACCTCAACAACCACATCCGACAACACACGGGCGTCACGCCGCACGCCTGCACCTACTGCAGCAAGACCTTCACCAGGAAGGAGCACCTCGTCAGCCACGTCAGACAACACACGGGCGAGACTCCGTTCAAATGCACATACTGCTCAAAGTCATTTTCACGTAAAGAACACCTGACAAATCACATACACCTCCATACTGGAGAAACCCCACACAAATGTCCATTCTGTACTAAGACATTCTCGAGAAAGGAGCATCTTACAAACCATGTTagAATCCACACGGGTGAATCTCCGCATCGCTGCGAGTTTTGTCAGAAAACCTTCACAAGAAAAGAGCACTTGACAAACCATATGAAGCAGCACACGGGCGACACGGCGCATGCGTGCAAGATTTGTTCAAAGCCGTTTGCAAGGAAAGAGCATCTTGTCACGCACATGAGgtcaCACAGTTGTGGAGAGAGACCTTATAGCTGTGGTGAATGCGGCAAATCTTTCCCGTTAAAAGGCAACCTATTGTTCCACGAACGATCGCACAACAAAGGCGCCCGACCATATCGCTGCGACATTTGTTCTAAGAACTTCTTATGTAAAGGGCATTTAGTATCTCATCGGCGAACGCATGGAGAGGCAGGAGAAAACCCACCTAGTGGAGATACACCTGCAGAAACTGAAGACTGCACTGATTGCaataaatgtatcaaaattGAGACAGATGCACCTGAAAGAAAGCATGAAGTCAGACCTGCAGTAGATAATCGACCAGCTGAGAACAGTGTGCCACCCCCACAACAAAACAACACAGCtgttatgcaaataaataatcaagTAAACCAGcagcaacaacaacaacaacaacaagtcCGGTCTGTAACCGCGACGAGTTCGCAAGGAGTGACGACCGGCACGTTTACCCACACGCCGAGCACCCAACATCACGCAGGGACGGCGATTGGCCACCATCCCGTCACTGTTAATTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSAESQNQRVQSAQQQQQSNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNILLGHHGAQPQVTVSASGAQQIPVSQIIATQSGQTHEALVGHSQQQELPGAQSASGGAQSVSSGQTSHQQVPNNRVEFVPHHNIDMGHHSQQHMMQQQLMASTRQDHPNQQIQLTVSEDGIVTVVEPGGGKMVDKEELHEAIKLPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNADGTTSIEASAGDHAPLPVVKDENKQPKLDAQFLQPDIKDIKGIDLKTVGAMGMEGAVVKISAGASEHDMHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQQQAKVINEVEVEAGTSAAMSEPESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPTERNTKRLTQDKPYACTACHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGVTPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFSRKEHLNNHIRQHTGVTPHACTYCSKTFTRKEHLVSHVRQHTGETPFKCTYCSKSFSRKEHLTNHIHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDTAHACKICSKPFARKEHLVTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKGARPYRCDICSKNFLCKGHLVSHRRTHGEAGENPPSGDTPAETEDCTDCNKCIKIETDAPERKHEVRPAVDNRPAENSVPPPQQNNTAVMQINNQVNQQQQQQQQQVRSVTATSSQGVTTGTFTHTPSTQHHAGTAIGHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00429225;
80% Identity: -