Basic Information

Insect: Theretra japonica
Gene Symbol: -
Assembly: GCA_033459515.1
Location: CM065943.1:10164901-10181667[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.3e-05 0.0053 17.4 2.2 1 23 436 458 436 458 0.97

2 20 0.0043 0.28 12.0 0.6 1 20 464 483 464 486 0.94

3 20 8.2e-05 0.0053 17.4 4.4 1 23 505 527 505 527 0.97

4 20 0.0001 0.0065 17.2 4.1 1 23 533 555 533 555 0.99

5 20 3.8e-05 0.0025 18.5 5.3 1 23 561 583 561 583 0.97

6 20 1.2e-05 0.00076 20.1 7.3 1 23 589 611 589 611 0.97

7 20 7.4e-07 4.8e-05 23.9 2.9 1 23 617 639 617 639 0.97

8 20 0.00011 0.0068 17.1 6.7 1 23 645 667 645 667 0.97

9 20 0.0001 0.0067 17.1 6.5 1 23 673 695 673 695 0.97

10 20 5e-07 3.2e-05 24.4 1.9 1 23 701 723 701 723 0.98

11 20 5.1e-05 0.0033 18.1 7.9 1 23 729 751 729 751 0.98

12 20 8.2e-06 0.00053 20.6 6.6 1 23 757 779 757 779 0.98

13 20 1.7e-06 0.00011 22.8 5.4 1 23 785 807 785 807 0.98

14 20 9.9e-06 0.00064 20.3 5.3 1 23 813 835 813 835 0.96

15 20 3.4e-06 0.00022 21.8 6.9 1 23 841 863 841 863 0.98

16 20 3.2e-06 0.0002 21.9 6.0 1 23 869 891 869 891 0.98

17 20 1.8e-05 0.0012 19.5 8.1 1 23 897 919 897 919 0.97

18 20 3.4e-06 0.00022 21.8 3.1 1 23 925 947 925 947 0.96

19 20 0.0004 0.026 15.3 0.4 1 23 954 976 954 976 0.96

20 20 0.26 17 6.4 5.6 1 23 983 1005 983 1005 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.3e-05	0.0053	17.4	2.2	1	23	436	458	436	458	0.97
2	20	0.0043	0.28	12.0	0.6	1	20	464	483	464	486	0.94
3	20	8.2e-05	0.0053	17.4	4.4	1	23	505	527	505	527	0.97
4	20	0.0001	0.0065	17.2	4.1	1	23	533	555	533	555	0.99
5	20	3.8e-05	0.0025	18.5	5.3	1	23	561	583	561	583	0.97
6	20	1.2e-05	0.00076	20.1	7.3	1	23	589	611	589	611	0.97
7	20	7.4e-07	4.8e-05	23.9	2.9	1	23	617	639	617	639	0.97
8	20	0.00011	0.0068	17.1	6.7	1	23	645	667	645	667	0.97
9	20	0.0001	0.0067	17.1	6.5	1	23	673	695	673	695	0.97
10	20	5e-07	3.2e-05	24.4	1.9	1	23	701	723	701	723	0.98
11	20	5.1e-05	0.0033	18.1	7.9	1	23	729	751	729	751	0.98
12	20	8.2e-06	0.00053	20.6	6.6	1	23	757	779	757	779	0.98
13	20	1.7e-06	0.00011	22.8	5.4	1	23	785	807	785	807	0.98
14	20	9.9e-06	0.00064	20.3	5.3	1	23	813	835	813	835	0.96
15	20	3.4e-06	0.00022	21.8	6.9	1	23	841	863	841	863	0.98
16	20	3.2e-06	0.0002	21.9	6.0	1	23	869	891	869	891	0.98
17	20	1.8e-05	0.0012	19.5	8.1	1	23	897	919	897	919	0.97
18	20	3.4e-06	0.00022	21.8	3.1	1	23	925	947	925	947	0.96
19	20	0.0004	0.026	15.3	0.4	1	23	954	976	954	976	0.96
20	20	0.26	17	6.4	5.6	1	23	983	1005	983	1005	0.99

Sequence Information

Coding Sequence: ATGAATCCGGAACACCATAATATAAATACGGGTGGTGGCCAGCCTCCTGGAGCCACAGAGTCTCAGAATCAGAGAGTGCAATCCGCACAACAACAGCAACAGAGTAATTTGACGCCCACCACGTCTGCAACGGACCTGCGAGTGAACTCTGCTGCAGTAAACGTTGCTTTGTCTAGCGTCGCAAAATATTGGGtgtttacaaatttattccCCGGCCCCATCCCGCAAGTTTCCGTCTATGGATTACCCACTGGCACTAGGATTGAAAATGGAAAACCAGTTCAGGATCTTGGCCAAGCACATGCAAGTATACTCAATGGTGATCCAAATATACTGCTTGGACATCACGGAGCACAGCCTCAGGTTACTGTGTCAGCATCGGGAGCACAACAGATACCAGTCTCACAAATCATAGCTACACAGTCTGGACAATCACATGAGGCGCTGGTGGGGCACGGCGCGGCGGAgctgggcggcgcgggcgtggcgggcggcggcgcgggcgcggcgggcggcggcgcggcgccctcGCACCACCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGACATCATTCCCAACAACATTTGATGCAACAGCAATTAATGGCGACGACGCGGCAAGATCATCCCAACCAACAAATTCAATTAACGGTGAGTGAGGACGGTATAGTCACGGTGGTGGAGCCCGGCGGAGGCAAAATGGTCGATAAAGAAGAACTGCATGAAGCCATCAAATTGCCCAACGATCACACGCTCACTGTCCACCAGTTGCAACAAATTGTGGGGCAGCAGGTGATAGACAGCGTGGTGCGCATCGAGCAGGCGACGGGCGAGCCCGCCAACATCCTGGTGACGCACAACGCGGACGGCACCACGTCCATCGAGGCCAGCGCCTCCGAGCACGAgcacacgcacgcgcacgcgccgcacgcaGACCACGCGCCACTTGTCAAGGACGAGAAGGCGCAGCCCAAGATCGACGCGCAGTTCGCCATACCTGCCGAGATCAAGGACATCAAGGGCATCGACCTTAAgACTGTGGGAGCAATGGGCATGGAAGGTGCTGTAGTGAAGATATCAGCCGGAGCGTCGGAACATGACATGCACGCCATGTATAAAGTTAACGTCGAGGATCTCTCACAGCTATTAGCATATCATGAAGtttttggaaaattaaattCAGAGGGACAGCCACAACAACAAGCAaagGTAATAAGTGAAGTAGAAGTCGAAGCTGGTACAAGCGCAGCCATGTCAGAGACAGAATCGTCGCCGGGACATCACTCGTGTGACATTTGCGGCAAGATATTCCAGTTCCGATATCAACTGATTGTTCACAGGCGATATCACGGCGAGAGCAAGCCTTTTACGTGCCAAGTATGTGGCTCGGCTTTCGCCAACCCTGTGGAATTATCAAGACACGGAAAATGCCATCTTGCCGGAGATCCGTCAGAACGACATGCTAAGAGATTAACGCAGGATAAGCCATACGCATGTACTGCTTgccataaaacattttcaagaaAGGAGCATCTTGACAATCATGTGAGAAGTCACACAGGAGAGACACCATACAGATGTGAGTTCTGCGCGAAGACATTCACTCGCAAGGAGCACATGGTGAACCACGTGCGGAAACACACCGGAGAGACTCCACATCGATGCGACATCTGCAAGAAGAGCTTCACCAGGAAGGAGCACTTCATGAACCACGTCATGTGGCACACTGGTGAAACGCCGCACCATTGTCAAATATGCGGGAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCTCACACGAACGATACACCGTTCAGGTGTGAACTGTGCGGCAAGTCGTTTACGAGGAAGGAACACTTCACCAATCACATATTGTGGCATACGGGTGAAACCCCACACCGCTGCGACTTCTGTTCGAAGACGTTCACTCGCAAGGAGCACCTGCTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAACACACGGGCGAGACGCCCTTCCAGTGCGGATACTGCCCCAAGGCGTTCACACGGAAGGACCATCTagTGAACCACGTACGGCAGCACACGGGCGAGTCTCCGCACAAGTGTTCGTTCTGCACGAAGTCGTTCACTCGCAAGGAGCACCTCACCAACCACGTGCGCCAACACACGGGCGAGTCGCCGCACCGCTGCACCTACTGCGCCAAGTCCTTCACCAGGAAGGAACACCTCACCAACCATATCAGACAGCACACGGGCGAAACTCCACACAAGTGCACCTACTGCCCGCGCGCCTTCACGCGCAAGGAACATCTCAACAACCACATCCGACAACACACGGGCGTCACGCCGCACGCCTGCACCTACTGCAACAAGACCTTCACCAGGAAGGAGCATCTCGTTAACCACGTCAGACAACACACGGGCGAGACTCCGTTCAAATGCACATACTGCTCAAAGTCATTCTCACGTAAAGAACACCTGACCAATCACATACACATCCACACCGGGGAGACCCCACACAAATGTCCCTTCTGTACTAAGACTTTCTCGAGAAAGGAGCATCTTACCAACCACGTTAGAATCCACACGGGAGAGTCGCCGCATCGGTGTGATTTCTGCCAGAAAACGTTTACGAGAAAAGAGCACTTGACGAACCACATGAAGCAGCACACGGGCGACACCGCGCACGCCTGCAAGATCTGCTCCAAACCCTTCGCGAGGAAAGAACACCTTGTTACGCATATGAGATCACACAGTTGTGGAGAAAGACCGTTTAGCTGTGACGAATGTGGGAAATCTTTCCCACTGAAAGGAAACTTATTGTTCCATGAACGATCGCACAATAAAGGCGTTCGGCCATATCGCTGCGATATTTGTTCCAAGAATTTCTTATGTAAAGGGCATTTAGTGTCTCACCGGCGCACGCACGCGGAGGCGGGAGAGACCCCGCCCAGCGGAGACACGCCGGCGGGCACCGACGACTGTACCGATTGTAACAAGTGCGTCAAGATCGAAGTGGAAGCTCCTGAGAGAAAACACGAAATCAGAGCGGCAGTTGAAAATCGACCTTCCGAAAACAGTGTACCGCCAGCGCAGCAAAATAATGCAGCtgttatgcaaataaataatcaagtaaatCAGCAACAAGTCCGGTCAGTAACCGTGACGAGTTCTCAAGGGGTGACCAGCGGCACGTTCACCCACACGCCCAGCACCCAGCACCACGCCGGGACCGCTATCGGGCACCATCCCGTCACTGTTAATTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGATESQNQRVQSAQQQQQSNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNILLGHHGAQPQVTVSASGAQQIPVSQIIATQSGQSHEALVGHGAAELGGAGVAGGGAGAAGGGAAPSHHQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMATTRQDHPNQQIQLTVSEDGIVTVVEPGGGKMVDKEELHEAIKLPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNADGTTSIEASASEHEHTHAHAPHADHAPLVKDEKAQPKIDAQFAIPAEIKDIKGIDLKTVGAMGMEGAVVKISAGASEHDMHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQQQAKVISEVEVEAGTSAAMSETESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPSERHAKRLTQDKPYACTACHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFTRKEHLNNHIRQHTGVTPHACTYCNKTFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHIHIHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGDTAHACKICSKPFARKEHLVTHMRSHSCGERPFSCDECGKSFPLKGNLLFHERSHNKGVRPYRCDICSKNFLCKGHLVSHRRTHAEAGETPPSGDTPAGTDDCTDCNKCVKIEVEAPERKHEIRAAVENRPSENSVPPAQQNNAAVMQINNQVNQQQVRSVTVTSSQGVTSGTFTHTPSTQHHAGTAIGHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00429225;
80% Identity: -