Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995247.1:6284127-6309582[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.6e-05 0.006 17.4 2.2 1 23 473 495 473 495 0.97

2 20 0.0045 0.31 12.0 0.6 1 20 501 520 501 523 0.94

3 20 8.5e-05 0.0059 17.4 4.4 1 23 542 564 542 564 0.97

4 20 0.0001 0.0072 17.1 4.1 1 23 570 592 570 592 0.99

5 20 4e-05 0.0028 18.4 5.3 1 23 598 620 598 620 0.97

6 20 2.2e-05 0.0015 19.3 7.3 1 23 626 648 626 648 0.97

7 20 7.7e-07 5.3e-05 23.8 2.9 1 23 654 676 654 676 0.97

8 20 0.00011 0.0076 17.0 6.7 1 23 682 704 682 704 0.97

9 20 0.00011 0.0075 17.1 6.5 1 23 710 732 710 732 0.97

10 20 5.3e-07 3.6e-05 24.3 1.9 1 23 738 760 738 760 0.98

11 20 5.4e-05 0.0037 18.0 7.9 1 23 766 788 766 788 0.98

12 20 4.4e-05 0.003 18.3 6.8 1 23 794 816 794 816 0.98

13 20 2.5e-05 0.0017 19.1 5.4 1 23 822 844 822 844 0.98

14 20 8.8e-06 0.00061 20.5 5.5 1 23 850 872 850 872 0.96

15 20 8e-06 0.00055 20.6 7.2 1 23 878 900 878 900 0.97

16 20 3.3e-06 0.00023 21.8 6.0 1 23 906 928 906 928 0.98

17 20 1.8e-05 0.0012 19.5 8.0 1 23 934 956 934 956 0.97

18 20 2.7e-06 0.00018 22.1 4.1 1 23 962 984 962 984 0.96

19 20 0.00059 0.04 14.8 0.3 1 23 991 1013 991 1013 0.96

20 20 0.27 19 6.4 5.6 1 23 1020 1042 1020 1042 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.6e-05	0.006	17.4	2.2	1	23	473	495	473	495	0.97
2	20	0.0045	0.31	12.0	0.6	1	20	501	520	501	523	0.94
3	20	8.5e-05	0.0059	17.4	4.4	1	23	542	564	542	564	0.97
4	20	0.0001	0.0072	17.1	4.1	1	23	570	592	570	592	0.99
5	20	4e-05	0.0028	18.4	5.3	1	23	598	620	598	620	0.97
6	20	2.2e-05	0.0015	19.3	7.3	1	23	626	648	626	648	0.97
7	20	7.7e-07	5.3e-05	23.8	2.9	1	23	654	676	654	676	0.97
8	20	0.00011	0.0076	17.0	6.7	1	23	682	704	682	704	0.97
9	20	0.00011	0.0075	17.1	6.5	1	23	710	732	710	732	0.97
10	20	5.3e-07	3.6e-05	24.3	1.9	1	23	738	760	738	760	0.98
11	20	5.4e-05	0.0037	18.0	7.9	1	23	766	788	766	788	0.98
12	20	4.4e-05	0.003	18.3	6.8	1	23	794	816	794	816	0.98
13	20	2.5e-05	0.0017	19.1	5.4	1	23	822	844	822	844	0.98
14	20	8.8e-06	0.00061	20.5	5.5	1	23	850	872	850	872	0.96
15	20	8e-06	0.00055	20.6	7.2	1	23	878	900	878	900	0.97
16	20	3.3e-06	0.00023	21.8	6.0	1	23	906	928	906	928	0.98
17	20	1.8e-05	0.0012	19.5	8.0	1	23	934	956	934	956	0.97
18	20	2.7e-06	0.00018	22.1	4.1	1	23	962	984	962	984	0.96
19	20	0.00059	0.04	14.8	0.3	1	23	991	1013	991	1013	0.96
20	20	0.27	19	6.4	5.6	1	23	1020	1042	1020	1042	0.99

Sequence Information

Coding Sequence: ATGAATCCGGAACACCATAATATAAATACGGGTGGTGGCCAGCCTCCGGGAAGTGCAGAGTCTCAGAATCAAAGAGTGCAATCCGCACAGCAACAGCAGCAAAATAATTTAACGCCCACCACGTCTGCAACTGACCTGCGAGTGAACTCTGCTGCCGTGAACGTTGCTTTGTCTAGCGTTGCAAAATATTGGGTGTTTACAAATTTATTTCCCGGCCCGATCCCACAAGTGTCTGTCTACGGACTACCCACAGGAACTAGAATTGAGAATGGAAAACCAGTCCAGGATCTTGGACAAGCCCATGCGAGTATACTCAATGGTGATCCAAACATATTACTGGGACACCATGGAGCACAACCGCAAGTTACAGTTTCGGCATCAGGAGCTCAGCAGATACCAGTGTCGCAGATCATTGCCACACAATCAGGACAATCGCACGAAGCGCTGGTGGGTCACAATCAGCAGCAAGATCTTGCGTCGCAGTCTGGTGGCGCGGCGTCAGTCAACGTGACGCACTCCTCGCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATACCATTGATATGGGGCATCATTCACAGCAACACATGATGCAACAACAGCTAATGACTACATCGCGGCAGGATCATCCAAATCAACAAATACAGTTAACAGTAAGTGAAGATGGCATAGTGACTGTAGTGGAGCCCGGCGGCGGCAAAATGGTGGATAAAGATGAATTACACGAAGCCATCAAGATACCAAGTGACCATGCACTTACTGTGCATCAGTTACAACAGATTGTTGGCCAGCAGGTGATCGACAGCGTCGTGCGCATCGAGCAGGCGACAGGCGAGCCCGCCAACATACTCGTCACACACAACGCTGACGGCACCACCTCTATCGAGGCGAGCGCGGCTGAACATACGCCGCACGCGACTCACGCCACGCACGCCTCACACGCCGCACACGCCTCACACACCTCACACGCTACACACGCCTCACACGCTACCCACGCTACACTCGCTACACACGCCTCACACGCCTCACACGCCTCACACGCCACACATGGCTCTCATGCGCCGCTCGTCAAGGACGAAAACAAACAACCCAAGATCGACGCACAGTTCGCCATACCCACTGAGATCAAGGACATCAAGGGCATCGACTTGAAGACTGTAGGAGCAATGGGAATGGAAGGCGCTGTAGTGAAGATATCCGCTGGAGCATCAGAACATGATATGCACGCCATGTACAAAGTAAACGTCGAAGATCTATCACAATTGTTAGCATATCATGAAGTGTTTGGGAAATTAAATTCAGAAGGACAACCACAGCAACAGGCGAAGGTAATAAGTGAGGTTGAAGTAGAAGCCGGTACAAGTACCGCTATGTCGGAACCTGAATCTTCTTCACCCGGACATCATTCGTGCGACATTTGTGGGAAAATATTCCAATTTCGATATCAACTGATCGTTCACAGGCGTTATCACGGCGAGAGCAAGCCATTCACGTGTCAAGTGTGTGGCTCAGCGTTTGCAAACCCCGTCGAGTTGTCGAGACACGGGAAATGTCATCTTGCTGGTGATCCATCAGAAAGGCACGCTAAAAGATTGACGCAAGATAAACCATACGCATGCACGGCTTGCCATAAAACATTTTCAAGGAAAGAGCATCTCGACAATCATGTGAGGAGTCACACAGGAGAGACCCCATACAGATGTGAGTTCTGCGCGAAAACGTTCACTCGTAAGGAGCACATGGTCAACCACGTGCGGAAACACACCGGAGAGACTCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACTAGGAAAGAACACTTCATGAACCATGTCATGTGGCACACAGGTGAAACACCGCACCATTGTCAAGTATGCGGAAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCGCACACGAACGATACTCCATTCCGTTGTGAACTGTGTGGCAAGTCGTTTACAAGAAAGGAACATTTCACCAATCACATATTGTGGCACACGGGTGAAACACCGCACAGATGCGACTTTTGTTCGAAAACCTTCACACGTAAAGAACATCTACTAAACCACGTGAGACAACATACAGGTGAATCTCCCCATCGGTGTAACTTCTGTTCGAAGTCTTTCACGAGGAGAGAACACCTCGTCAACCACGTGCGGCAGCATACAGGGGAGACGCCTTTCCAGTGTGGATACTGCCCAAAAGCATTCACAAGGAAGGACCATCTCGTAAACCACGTACGGCAGCACACGGGCGAGTCGCCGCACAAGTGTTCGTTCTGCACGAAGTCGTTCACGCGCAAGGAACATCTCACCAACCACGTGCGCCAACACACCGGCGAGTCCCCGCATCGCTGCACATTCTGCGCCAAGTCCTTCACCAGGAAGGAACACCTCACCAATCATATCAGACAGCACACGGGCGAAACTCCACACAAGTGCACGTTCTGCCCGCGCGCCTTCTCGCGCAAGGAGCATCTCAACAACCACGTGCGCCAGCACACCGGCGCCACGCCGCACGCCTGCACCTACTGCACCAAGACCTTCACGCGCAAGGAACATCTCGTCAACCATATCAGACAACACACGGGCGAGACGCCGTTTAAATGCACGTACTGCTCTAAATCATTTTCACGTAAAGAACACCTGACAAATCATATACACCTTCACACAGGAGAGACTCCACACAAATGTCCCTTCTGTACTAAGACATTCTCGAGAAAGGAGCATCTTACCAACCATGTTAGGATCCACACGGGCGAATCGCCGCACCGCTGCGAGTTTTGTCAAAAAACGTTCACTAGGAAGGAACACCTCACGAATCATATGAAACAGCACACAGGCGACACTGCGCATGCGTGCAAGATATGCTCCAAACCATTCACAAGGAAGGAGCATCTTGTTACGCATATGAGATCACACAGTTGTGGAGAAAGGCCATACAGTTGTGGTGAATGCGGCAAGTCGTTCCCGCTGAAAGGCAACCTGCTGTTCCACGAACGGTCACATAACAAAGGTGCTCGTCCGTACCGGTGCGACATCTGTTCCAAAAACTTCTTATGTAAAGGTCATTTAGTATCTCACCGGCGCACGCACGCGGAAGCGGGAGAGAATCCGCCGAGCGGTGACGCGCCGCCCGAGACTGACGACTGCACCGACTGCAACAAGTGTGTCAAGATAGAAGCCGACGCACCGGAGAGGAAGCACGATATCAGAACTGCAGTGGAAAATAGACCAGCTGAAAACAATGTACCTCAAACTCCACAAACCAACACAGCTGTTATGCAAATTAATAATCAAGTTAATCAGCAGGTCCGGTCAGTAACAGCGACGAGTTCACAAGGCGTGACGACGGGCACCTTCACCCACACCGCCCATACGCCCAGCGCGCATCACACCACCACGCCCATACCGCACCATCCCGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSAESQNQRVQSAQQQQQNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNILLGHHGAQPQVTVSASGAQQIPVSQIIATQSGQSHEALVGHNQQQDLASQSGGAASVNVTHSSHQQVPNNRVEFVQHHTIDMGHHSQQHMMQQQLMTTSRQDHPNQQIQLTVSEDGIVTVVEPGGGKMVDKDELHEAIKIPSDHALTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNADGTTSIEASAAEHTPHATHATHASHAAHASHTSHATHASHATHATLATHASHASHASHATHGSHAPLVKDENKQPKIDAQFAIPTEIKDIKGIDLKTVGAMGMEGAVVKISAGASEHDMHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQQQAKVISEVEVEAGTSTAMSEPESSSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPSERHAKRLTQDKPYACTACHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFSRKEHLNNHVRQHTGATPHACTYCTKTFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHIHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDTAHACKICSKPFTRKEHLVTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKGARPYRCDICSKNFLCKGHLVSHRRTHAEAGENPPSGDAPPETDDCTDCNKCVKIEADAPERKHDIRTAVENRPAENNVPQTPQTNTAVMQINNQVNQQVRSVTATSSQGVTTGTFTHTAHTPSAHHTTTPIPHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00429225;
80% Identity: -