Cpun021963.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Conogethes punctiferalis
Gene Symbol
ttk
Assembly
GCA_031163375.1
Location
CM062101.1:10034196-10040938[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.7e-17 8.5e-14 51.6 0.0 1 42 330 372 330 375 0.94

Sequence Information

Coding Sequence
ATGTCGCAACAGTACAGCTTGCGGTGGAACAACCACCAGCCCAACTTCATATCCATGTTCACGACGCTGCTGAACACGCAGACGCTGGTGGACGTCACCCTGGCCGCGGAGGGGAAGCACCTGCAGGCGCACAAAGTGGTGCTCTCCGCCTGCAGCACGTACTTTCAGGCATTGTTCGTGGACAACCCTTCACGCCACCCCATAGTTATCCTCAAGGATGTTACATTCGCAGACCTCCGCACTATGGTAGACTTCATGTACTATGGAGAAGTAAACGTCACTGAAGAACAGTTGCCACAAGTCCTCGACACAGCGAAACTGCTCAAGATAAAGGGCCTCACCGAGATGCCGGACTCGACGTCGCTCACGCGCTCACAGGGCACCACGGCCGACTTCCAGTCGCCGGGTGAATCGGTCGACTCGCAGCGGCACTCCGCCTCGCCGGCTACCTCGCCCTCCAACAAGCGCAAGCGTTTCGTGCGCAGGAAAAGCTCGACGGGCTCGACGTCGCTCAACATGGTCGGCGACGAGAACCGGCCCGAGGAGGGGGGGCAGTCCGTGGACCTGGTGAGGGGGGAGACGATCACGCTGAGCAGCGTGCCGCAGCAGCGTCGGCGGGACTACGACGACAGGCCGCTGGACAACTCCCACCAGCAGACAGCGGAGCCCCACAATATGAACGTGGAGCCCCTCGCCATGGACGCGAACCCCGCCGGTATTCCTCAAGGAGGACAATGGAGTATGATGGAGCATACGTACCCCCGGTATTCGAACGCGTGCATCGGCGGCGGGGCGCTGCAGCCGGACCCCGGCATGTACATGAACAACGTGATGAACCCCCATATGGACCCCGAGCTGACCGACTACGGCCAGGGGCTCGGCGTCACCGGGCCCTCCCCGGGGCCCTCCTGCGTAGCCGAGGCCCAAACCCCGCAGGAACCCTCGCCGAAGGTCCAGCCCAAACGCCGCCGCACCACCAACCCGCAATCAGAAGAAAACTTCCAAAGAGCGCTGGAGGCCGTCCGCTTCGGAGGCATAGGCTTCTGCAAAGCCGCTCGCATGTTCGGGGTCAACAACCGGACGCTGTGGCTAGAATACAAGAAGAGGGGCTACCCCAACAACCGGCCCAGCATAAAGAGCAGGATCAAACGCGAACACGCCACGCCCCCACTAGAACACAAGGAGGAAATGCCCCAACCggaacaacagatggcgctgctCTGCCCCCCTCACCCCGTCCCCGTGAGCTTCATAGACTCGCGACCGATCGACTTTCCACTACAAGGCGTACCCCACAACTCACCCCTCAACATTTTGGGGGTGAACTTTAATACGATGCAATAG
Protein Sequence
MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGTTADFQSPGESVDSQRHSASPATSPSNKRKRFVRRKSSTGSTSLNMVGDENRPEEGGQSVDLVRGETITLSSVPQQRRRDYDDRPLDNSHQQTAEPHNMNVEPLAMDANPAGIPQGGQWSMMEHTYPRYSNACIGGGALQPDPGMYMNNVMNPHMDPELTDYGQGLGVTGPSPGPSCVAEAQTPQEPSPKVQPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSIKSRIKREHATPPLEHKEEMPQPEQQMALLCPPHPVPVSFIDSRPIDFPLQGVPHNSPLNILGVNFNTMQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00751947; iTF_00365047; iTF_00408571; iTF_00408318; iTF_00752190; iTF_00204449; iTF_00204293; iTF_01159530; iTF_01337834; iTF_01154219; iTF_01156204; iTF_01156753; iTF_01153778; iTF_00922969; iTF_01158617; iTF_00922810; iTF_00195263; iTF_01337695; iTF_00195104; iTF_00806843; iTF_00806617; iTF_00994459; iTF_00994290; iTF_00027683; iTF_00026986; iTF_00026772; iTF_00027895; iTF_00112611; iTF_01317420; iTF_01317199; iTF_00112437; iTF_00113247; iTF_00288163; iTF_01153121; iTF_01438150; iTF_01438823; iTF_00277288; iTF_01437896; iTF_01359882; iTF_00287983; iTF_01439153; iTF_00971156; iTF_00971479; iTF_00970520; iTF_01359640; iTF_01152953; iTF_00970330; iTF_00277472; iTF_00820228; iTF_00819981; iTF_00428311; iTF_00428025; iTF_01429859; iTF_00429156; iTF_01430053; iTF_00428921; iTF_00858469; iTF_01359044; iTF_00063719; iTF_00341255; iTF_00858696; iTF_00341453; iTF_01010511; iTF_00063504; iTF_01010288; iTF_01358807; iTF_00787542; iTF_00787796; iTF_00290589; iTF_00290823; iTF_00819296; iTF_00819077; iTF_00180389; iTF_01130119; iTF_00249641; iTF_00180586; iTF_00249805; iTF_01129967; iTF_01176271; iTF_01115637; iTF_01115802; iTF_01176125; iTF_01494985; iTF_01495133; iTF_01495709; iTF_01495870; iTF_01494413; iTF_01494244; iTF_00673607; iTF_00673415; iTF_01331367; iTF_01331809; iTF_00942732; iTF_00942948; iTF_01282476; iTF_01282151; iTF_00074669; iTF_00074405; iTF_01280111; iTF_01280513; iTF_01490256; iTF_01490066; iTF_00235796; iTF_00235964; iTF_00006385; iTF_00006222; iTF_00076690; iTF_00076393; iTF_01281234; iTF_01281457; iTF_00075667; iTF_00075400; iTF_00432051; iTF_00432363; iTF_01124531; iTF_01124713; iTF_00197300; iTF_00197457; iTF_01081716; iTF_01081516; iTF_01020149; iTF_01020433; iTF_01125590; iTF_01125393; iTF_00114202; iTF_00114035; iTF_01082586; iTF_01082361; iTF_01402810; iTF_01402657; iTF_01503771; iTF_01504007; iTF_01071740; iTF_01071565; iTF_01334014; iTF_01333658; iTF_00855807; iTF_00855963; iTF_00840241; iTF_00840382; iTF_00279232; iTF_00279051;
90% Identity
iTF_00751947; iTF_00365047; iTF_00408571; iTF_00408318; iTF_00752190;
80% Identity
iTF_00365047;