Tobl022136.1
Basic Information
- Insect
- Troides oblongomaculatus
- Gene Symbol
- ttk
- Assembly
- GCA_029032895.1
- Location
- JARDWC010000447.1:5930458-5934308[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 1.6e+03 -0.6 0.0 20 34 215 229 214 234 0.87 2 2 4e-16 4.3e-13 49.3 0.0 1 42 327 369 327 372 0.94
Sequence Information
- Coding Sequence
- ATGTCACAGCAATATAGCCTGAGGTGGAATAACCACCAGCCAAACTTCATTTCAATGTTTACTACACTTTTAAATACACAAACCCTTGTTGATGTTACTTTGGCAGCAGAGGGCAAGCACCTACAAGCTCACAAGGTTGTTTTATCTGCATGCAGTACCTACTTCCagGCCCTGTTCGTTGATAACCCGTCTCGGCATCCTATTGTAATTCTTAAAGATGTATCGTTTTCTGATCTCCGCATAATGGTAGATTTTATGTATTATGGTGAAGTAAATGTAACTGAAGAGCAATTGCCTCAAGTCCTTGACACAGcgaaattattgaaaataaaggGTTTAACAGAGATGCCCGACTCCACATCTCTCACACGCTCTCAAGGGACATCTGCAGACTTCCAGTCTCCGGGAGATTCAATAGAGTCTCAGAGACATTCTACGTCTCCTGTGCCATCACCATCAAACAAACGTAAAAAGCGCCGTAAAAGTTCAACTGGTTCAACATCCCTAAACATGTTAGAAGATAACAGAAATGAAGAGGCTGGGCAATCTGTTGATCTAGTTCGTGGTGATTCTATTACTTTAAGCAGTCTCCCACAGCAAAGACGCATGAGAGATTATCAGGAAGAAAGAATAGATGCTGCTCAACAGgcTGCTGATCAACACAATCTCAGTGTGGATACTTTAACAATGGAGAATAATTCAGCGGGAATCCCACAAgGAGGCCAATGGAGTATGATGGAGCACACATACCCCCGTTATTCGAACGCCTGCATCGGCGGTGGCGGGCTCCAACCGGACCACAGCATGTACATTAATAACGTCATAAACCCACACATGGAGTCAGATATGAACGATTACGGACAAGGGTTAGGAGTGACTGGACCATCGCCTGGCCCCAGCTGTGTTACAGAACCACAAACTGCCCAAGAATCGGTACCGCAGACCCAAACTAAGCGACGTCGGACAACAAACCCACAATCCGAAGAGAACTTTCAACGAGCCCTCGAAGCCGTCCGTTTCGGTGGCATCGGTTTCTGTAAAGCAGCACGGATGTTCGGAGTAAACAATAGGACATTGTGGCTCGAGTACAAAAAGAAGGGATACCCGAACAATAGACCGAGCATTAAGAGTCGGATAAAGCGCGAGCACACCTCTCCGCCGCCTGAACCGAAGGAAGAAGCACCGCAACCCGAGCAACAGATGGCACTTATATGTCCTCCACATCCGGTACCAGTGGGTTTTATAGACTCCAGACCGATCGACTTCCCATTGCAAGGAGTACCACACAACTCACCCTTGAATATTCTCGGAATGAACTTTAATTCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVSFSDLRIMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGTSADFQSPGDSIESQRHSTSPVPSPSNKRKKRRKSSTGSTSLNMLEDNRNEEAGQSVDLVRGDSITLSSLPQQRRMRDYQEERIDAAQQAADQHNLSVDTLTMENNSAGIPQGGQWSMMEHTYPRYSNACIGGGGLQPDHSMYINNVINPHMESDMNDYGQGLGVTGPSPGPSCVTEPQTAQESVPQTQTKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTSPPPEPKEEAPQPEQQMALICPPHPVPVGFIDSRPIDFPLQGVPHNSPLNILGMNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00364840;
- 90% Identity
- iTF_01159530;
- 80% Identity
- iTF_01494985;