Adix000203.1
Basic Information
- Insect
- Atrophaneura dixoni
- Gene Symbol
- ttk
- Assembly
- GCA_018248015.1
- Location
- DWHX01000022.1:45642-49740[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.54 1.5e+03 0.6 0.0 19 34 215 230 214 234 0.88 2 2 3.3e-16 9.4e-13 49.3 0.0 1 42 328 370 328 373 0.94
Sequence Information
- Coding Sequence
- ATGTCACAGCAATATAGCCTGAGATGGAAcaaccaccaaccaaacttcaTTTCAATGTTTACAACACTTTTAAATACGCAAACTCTTGTTGATGTTACTTTGGCAGCAGAGGGCAAGCACCTACAAGCCCACAAGGTTGTCTTATCAGCATGCAGTACCTACTTCCAGGCTCTCTTTGTGGATAATCCTTCTCGACATCCCATTGTAATTCTTAAGGATGTATCATTCTCCGACCTACGCATAATGGtagattttatgtattatggtGAAGTTAATGTAACCGAGGAGCAATTGCCTCAAGTTCTTGACACAgcaaaattgttgaaaattaaGGGCTTAACAGAGATGCCAGACTCCACATCTCTTACACGTTCTCAAGGAACATCTGCAGACTTCCAGTCACCAGGAGATTCCATAGATTCTCAGAGACATTCTACATCTCCAGTACCATCACCTTCAAACAAACGTAAAAAACGCCGTAAAAGCTCAACAGGCTCAACTTCATTAAATATGTTGTCAGAAGATAACAGAAATGAAGATGCTGGGCAATCTGTTGATCTGGTTCGAGGAGATTCTATTACATTAAGCAGTCTCCCACAGCAAAGACGCATGAGAGATTATCAGGATGATAGAATAGATGCTACACAACAgGCTGCTGATCAACACAATCTTAGTGTGGATACTTTAACAATGGAGAACAACCCAGCAGGAATCCCCCAAgGAGGCCAATGGAGTATGATGGAGCACACATACCCCCGTTACTCGAACGCCTGCATCGGCGGAGGCGGTCTCCAACCGGATCACGGCATGTACCTTAATAACGTCATAAACCCTCATATGGAATCTGATATGAACGATTACGGACAAGGCTTAGGAGTGACTGGACCCTCGCCTGGGCCCAGCTGTGTTGCCGAACCACAAACTGCTCAAGAGGCGGTACCACAGACCCAAACCAAGCGGCGCCGGACAACTAATCCACAGTCCGAAGAGAACTTCCAACGAGCCCTTGAAGCCGTTCGCTTCGGTGGCATCGGTTTCTGTAAAGCAGCACGAATGTTCGGAGTAAACAATAGGACATTGTGGCTCGAGTACAAAAAGAAGGGATACCCGAACAATAGACCAAGCATCAAGAGTAGGATAAAACGCGAGCATACCTCACCGCCACCCGAACCGAAAGAAGAAATTCCGCAACCTGAGCAACAGATGGCACTTATATGTCCTCCACATCCGGTGCCTGTGAGTTTTATTGACTCTAGGCCAATCGACTTCCCATTGCAAGGAGTACCACATAACTCACCCTTGAATATCCTCGGAATGAACTTTAATTCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVSFSDLRIMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGTSADFQSPGDSIDSQRHSTSPVPSPSNKRKKRRKSSTGSTSLNMLSEDNRNEDAGQSVDLVRGDSITLSSLPQQRRMRDYQDDRIDATQQAADQHNLSVDTLTMENNPAGIPQGGQWSMMEHTYPRYSNACIGGGGLQPDHGMYLNNVINPHMESDMNDYGQGLGVTGPSPGPSCVAEPQTAQEAVPQTQTKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTSPPPEPKEEIPQPEQQMALICPPHPVPVSFIDSRPIDFPLQGVPHNSPLNILGMNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00364840;
- 90% Identity
- iTF_01159530;
- 80% Identity
- iTF_00180586;