Aper008948.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- lolal_1
- Assembly
- None
- Location
- GWHABGR00000001:25158650-25170278[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-16 2.6e-13 49.6 0.0 1 42 249 291 249 294 0.94
Sequence Information
- Coding Sequence
- ATGGTCGACTTTATGTACTATGGTGAAGTCAACGTTACTGAGGAACAGTTACCACAGGTTTTGGATACCGCTAAACTACTAAAGATCAAAGGTCTGACAGAGATGCCAGATTCAACTTCATTAACCAGATCACAGGGTACGTCCGCTGATTTTCAGTCACCTGGTGAATCGATTGACTCACAGAGGCACTCGTCTTCACCTGCCACGTCACCATCTAATAAACGAAAACGATTTGTGCGGAGGAAGAGCTCGACCGGATCTGCCTCGCTGAACATGGTCATGGGTGAAGATAACCGGCAGGAGGAGCCGCAAAACCTGGAACTGATGCGTGGTGAAACGATTACTCTTAGCAGTGTCCCGCAACAACGCCGTCGGGAGTACCATGATGACAGGGCGATCGATAATGCTCAACAGGCAAACGATCACCAAAATTTAAACGTCGAGCCTGTTACGATGGATGCGAATTCTGCAGGGTTGCCTCAAGGAGCGCAGTGGAGTATGATGGAGCACGCGTACCCGCGGTATACGAACGCGTGCCTCGGTGGCGGCCCGCTCCAGTCCGAGACGGGTATCTACATGAACAACGTGATCGACCATCACATGGATCCGGACATGAACGACTACGGGCAGGGTATGGGTGTCGCCGGTCCCTCCCCCGGTTCTAGCTGCATGAACGACGTCCTGCCGATTCAGGATCAGCCGCCCCCCGCCCAGCCGAAGCGGCGCCGCACCACGAACCCTCAGTCCGAGGAGAACTTCCAGCGCGCCCTCGAGGCCGTCCGATTCGGCGGCATCGGCTTCTGCAAGGCGGCCAGGATGTTCGGCGTCAACAATAGGACCCTCTGGCTCGAATACAAGAAGAAAGGTTACCCGAACAACCGGCCGAGTATAAAGAATCGTATCAAACGCGAGCATACGACACCGCCGCCCGAGCATAAGGAGGACATGGCGCAGCCGGAACGACAGATGGCGCTGATATGCCCCCCGCACCCGGTCCCCGTCGGGTTCATAGATTCGCGGCCTATAGACTTCCCCCTCCAGGGTGTTCCACACAATTCCCCCCTGAATATTCTCGGGGTGAACTTTAATTCGATGCAATAG
- Protein Sequence
- MVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGTSADFQSPGESIDSQRHSSSPATSPSNKRKRFVRRKSSTGSASLNMVMGEDNRQEEPQNLELMRGETITLSSVPQQRRREYHDDRAIDNAQQANDHQNLNVEPVTMDANSAGLPQGAQWSMMEHAYPRYTNACLGGGPLQSETGIYMNNVIDHHMDPDMNDYGQGMGVAGPSPGSSCMNDVLPIQDQPPPAQPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKNRIKREHTTPPPEHKEDMAQPERQMALICPPHPVPVGFIDSRPIDFPLQGVPHNSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00364840;
- 90% Identity
- iTF_01317199; iTF_01317420; iTF_00112437; iTF_00112611; iTF_00114202; iTF_00114035;
- 80% Identity
- -