Oale021731.1
Basic Information
- Insect
- Ornithoptera alexandrae
- Gene Symbol
- ttk
- Assembly
- GCA_029030555.1
- Location
- JARDVY010000297.1:2414248-2417947[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.8 2e+03 -0.8 0.0 20 34 216 230 215 233 0.88 2 2 1.8e-16 4.5e-13 49.3 0.0 1 42 328 370 328 373 0.94
Sequence Information
- Coding Sequence
- ATGTCACAGCAATATAGCCTGAGGTGGAACAACCACCAGCCAAACTTCATTTCAATGTTCACTACACTTTTAAACACACAAACCCTTGTTGATGTTACTTTAGCAGCAGAGGGCAAGCATCTACAAGCTCACAAGGTTGTTTTATCTGCATGCAGTACCTATTTCCagGCCTTGTTTGTGGATAACCCGTCTCGGCATCCTATTGTAATCCTTAAGGATGTATCTTTCTCTGATCTACGAATAATGGtagattttatgtattatggtGAAGTAAATGTAACTGAAGAGCAATTGCCTCAAGTCCTTGACACAgctaaattattgaaaataaagggTTTGACAGAGATGCCAGACTCCACATCTCTCACACGCTCTCAAGGGACATCTGCAGACTTCCAGTCTCCTGGAGATTCAATAGACTCTCAGAGACATTCTACATCTCCTGTACCATCACCATCAAACAAACGTAAAAAGCGCCGTAAAAGTTCAACCGGTTCAACATCGCTAAACATGTTGCCAGAAGATAACAGAAATGAAGATGCTGGGCAATCTGTTGATCTAGTTCGTGGCGATTCTATTACATTAAGCAGCCTCCCACAGCAAAGACGCATGAGAGATTACCAGGAAGAAAGAATAGATGCTGCTCAACAAgcTGCTGATCAACACAATCTCAGTGTGGATACTTTGACAATGGAGAATAATCCAGCAGGAATCCCAcaagGAGGCCAATGGAGTATGATGGAGCACACATACCCCCGTTATTCGAACGCCTGCATCGGCGGAGGCGGGCTCCAGCCGGACCACAGCATGTACATTAATAACGTCATAAACCCCCACATGGAGTCAGATATGAACGATTATGGACAAGGTTTAGGAGTGACTGGACCCTCGCCTGGCCCCAGCTGTGTTACAGAACCACAAACTGCCCAAGAAACGGTACCACAGACCCAAACTAAACGACGTCGGACAACAAATCCACAATCCGAAGAGAACTTCCAACGAGCCCTCGAAGCCGTCCGTTTCGGTGGCATCGGTTTCTGTAAAGCGGCACGGATGTTCGGAGTAAACAATAGAACATTGTGGCTCGAGTACAAAAAGAAGGGATACCCGAACAATAGACCGAGCATTAAGAGCCGGATAAAGCGCGAGCATACCTCTCCGCCGCCTGAACCTAAGGAAGAAATTCCGCAACCCGAGCAACAGATGGCACTTATATGTCCTCCACATCCGGTACCAGTGAGTTTTATAGATTCCAGGCCGATTGACTTCCCATTGCAAGGAGTACCACACAACTCGCCTTTGAATATTCTCGGCATGAACTTTAACTCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVSFSDLRIMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGTSADFQSPGDSIDSQRHSTSPVPSPSNKRKKRRKSSTGSTSLNMLPEDNRNEDAGQSVDLVRGDSITLSSLPQQRRMRDYQEERIDAAQQAADQHNLSVDTLTMENNPAGIPQGGQWSMMEHTYPRYSNACIGGGGLQPDHSMYINNVINPHMESDMNDYGQGLGVTGPSPGPSCVTEPQTAQETVPQTQTKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTSPPPEPKEEIPQPEQQMALICPPHPVPVSFIDSRPIDFPLQGVPHNSPLNILGMNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00364840;
- 90% Identity
- iTF_01159530;
- 80% Identity
- iTF_01115802;