Murs010467.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- lolal
- Assembly
- GCA_003671415.1
- Location
- PDGT01000004.1:4693623-4697638[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-16 1.4e-13 50.6 0.0 1 42 326 368 326 371 0.94
Sequence Information
- Coding Sequence
- ATGACACAACAGTACAGTCTACGATGGAACAACCATCAGCCAAATTTCATCTCGATGTTTACTACATTATTAAACAGTCAAACATTAGTAGACGTGACCCTTGCAGCCGAGGGTAAACAATTGCAAGCGCATAAGGTGGTGCTGTCTGCTTGCAGCACTTACTTTCAGTCATTGTTTGTTGACAATCCGTCACGTCAtccaattgttattttaaaagatgttacCTTTGCCGATTTGCGCACTATGGTCGACTTCATGTATTATGGAGAAGTGAACGTGACTGAAGAACAGTTGCCTCAGGTTTTGGACACTGCAAAATTGCTGAAGATTAAGGGTCTAACTGAAATGCCAGACTCTACATCACTCACTCGCTCTCAAGGCCATGCTCTGGATTTCCAATCCCCTGGGGACTCTATTGAATCTCAAAGACACTCCACTTCACCAGCTGCATCTCCTAGGAACAGACAAAAAAGGCGTAGGAAGAGTTCCACGGGCTCGACTTCTTTGAACATGGTTGCAGAGGAGAATAGGAATGATGATGCTGGTCAACCAGTGGATGTGGTCCGTGGCGAGTCTATAACGTTGAGCAGTGTTCCACAGCAACGACGTCTCCGAGAATACGATGAGAGGGCTGAGAATGCACAGCagGCTGGGGAACCACACAATCTTAATGTCGAACCTCTGGCTATGGAAAACAATCCTATGGTGATACCACAAGGAGGGCAGTGGAGTATGTTGGAGCATACTTACCCCCGGTATTCAAACACCTGCATCGGAGGCAATGGTGGACTTCAACCAGATCCTGGaatgtataatgttattaatcCTCATATGGACCCCGAGATTAATGACTACGGCCAAGGATTAGATGTTACTGGTCCCTCACCGGGACCAAGTTGCGTAACTGAGACGCAAACAGTGCAAGAAACAGTCCCTGCAACAGCGCCCAAACGCCGGCGCACTAGCAATCCCCAATCGGAGGAAAATTTTCAGAGAGCTCTGGAAGCTGTACGATTTGGGGGCATCGGTTTTTGTAAGGCAGCTCGTTTGTTCGGCGTTAATAACAGAACTTTATggttggaatataaaaaaaaaggatatcCAAATAATCGACCTAGTATTAAGAGTCGCATTAAGCGAGAACATACGACGCCGCCGCCCGAACATAAAGATGATGTAGCTCATCCCGAACAACAAATGGCATTGCTTTGCCCGCCTCATCCCGTCCCTGTGGGATTTATTGACTCCCGCCCACTGGACTACCCAATCCAAGGCGTTCCACATAGTTCCCCTCTGAACATTCTCggtgtaaattttaattcaatgcaATAG
- Protein Sequence
- MTQQYSLRWNNHQPNFISMFTTLLNSQTLVDVTLAAEGKQLQAHKVVLSACSTYFQSLFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGHALDFQSPGDSIESQRHSTSPAASPRNRQKRRRKSSTGSTSLNMVAEENRNDDAGQPVDVVRGESITLSSVPQQRRLREYDERAENAQQAGEPHNLNVEPLAMENNPMVIPQGGQWSMLEHTYPRYSNTCIGGNGGLQPDPGMYNVINPHMDPEINDYGQGLDVTGPSPGPSCVTETQTVQETVPATAPKRRRTSNPQSEENFQRALEAVRFGGIGFCKAARLFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKDDVAHPEQQMALLCPPHPVPVGFIDSRPLDYPIQGVPHSSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00364840;
- 90% Identity
- iTF_01082586;
- 80% Identity
- iTF_00971156;