Tlin001263.1
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- ttk
- Assembly
- GCA_963932265.1
- Location
- OZ010680.1:1776426-1782768[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-16 2.2e-13 50.6 0.0 1 42 326 368 326 371 0.94
Sequence Information
- Coding Sequence
- ATGACGCAACAGTACAGTCTGCGATGGAACAACCATCAGCCGAATTTTATCTCGATGTTTACCACGTTGCTAAACACACAAACATTGGTAGACGTTACCCTCGCAGCCGAGGGTAAGCATCTGCAAGCGCATAAGGTGGTGCTGTCTGCTTGCAGTACTTACTTTCAGGCGTTGTTTGTTGACAATCCGTCACGTCATCCAATCGTCATTTTAAAAGACGTTACTTTTGCCGATTTGCGCACTATGGTCGACTTCATGTACTATGGAGAAGTAAACGTGACTGAAGAACAGTTACCTCAGGTGTTGGACACGGCGAAATTGCTGAAGATAAAAGGTCTAACTGAGATGCCAGACTCCACATCCCTTACTCGGTCTCAAGGCAATGCTCCAGATTTCCAATCCCCTGGGGACTCTATTGAATCTCAGAGACACTCTACATCACCAGCTGCGTCGCCTAGAAACAGACAGAAGAGGCGCAGGAAGAGTTCGACGGGCTCGACCTCGTTGAACATGGTTGGAGAGGAGAATAGGAACGATGAAGCCGCTCAACATGTGGACGTGGTTCGCGGCGAGTCGATCACCCTGAGCAGCGTGCCCCAGCAACGGCGACTCCGCGAATATGATGAGAGGGCGGAGAACGCGCAACAGGCTGGAGAACCACACAACCTTAATGTCGAACCCCTGGCTATGGACAACAACCCTATGGTCATCCCACAAGGAGGGCAGTGGAATATGATGGAGCATACTTATCCACGGTATTCAAACACCTGCATCGGAGGCAGTGGGGGACTACAACCAGATCCTGGAatgtataatgttattaatCCTCATATGGACACCGAGATTAATGACTACGGACAAGGATTAGACGTTACCGGCCCCTCGCCTGGGCCGAGTTGCGTGAATGAAACGCAAACCATTCAAGAAACTGTCCCTGCGACGGTACCCAAACGTAGGCGCACTACCAACCCCCAATCGGAGGAAAATTTCCAGAGAGCTCTGGAAGCTGTAAGATTTGGAGGAATCGGGTTTTGTAAAGCAGCACGTTTATTCGGCGTCAACAACAGAACCCTATGGTTGGAATACAAGAAGAAGGGATACCCAAACAATCGACCTAGCATTAAGAGTCGCATTAAGCGAGAACATACGACGCCGCCGCCAGAACATAAAGATGATAACGCACATCCCGAACAACAAATGGCATTACTATGTCCACCACATCCTGTCCCAGTAGGATTTATTGACTCCCGCCCACTTGACTTCCCAATCCAAGGCGTACCCCACAGCTCCCCTCTGAACATTCTCGGTGTAAATTTTAATTCGATACAATAG
- Protein Sequence
- MTQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRSQGNAPDFQSPGDSIESQRHSTSPAASPRNRQKRRRKSSTGSTSLNMVGEENRNDEAAQHVDVVRGESITLSSVPQQRRLREYDERAENAQQAGEPHNLNVEPLAMDNNPMVIPQGGQWNMMEHTYPRYSNTCIGGSGGLQPDPGMYNVINPHMDTEINDYGQGLDVTGPSPGPSCVNETQTIQETVPATVPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARLFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKDDNAHPEQQMALLCPPHPVPVGFIDSRPLDFPIQGVPHSSPLNILGVNFNSIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00364840;
- 90% Identity
- iTF_01082586;
- 80% Identity
- iTF_01439153;