Basic Information

Insect: Campoletis raptor
Gene Symbol: klhl36
Assembly: GCA_948107755.1
Location: OX403631.1:6285719-6288244[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.1e-06 0.0068 16.0 0.0 2 38 205 241 204 247 0.86

2 4 6.9e-10 5.8e-07 29.0 0.0 5 38 258 290 255 294 0.93

3 4 0.0042 3.6 7.3 0.0 7 34 312 338 308 344 0.84

4 4 2.2e-12 1.9e-09 37.0 0.1 2 39 367 404 366 408 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.1e-06	0.0068	16.0	0.0	2	38	205	241	204	247	0.86
2	4	6.9e-10	5.8e-07	29.0	0.0	5	38	258	290	255	294	0.93
3	4	0.0042	3.6	7.3	0.0	7	34	312	338	308	344	0.84
4	4	2.2e-12	1.9e-09	37.0	0.1	2	39	367	404	366	408	0.94

Sequence Information

Coding Sequence: ATGTCAACAACAACAATAATAGAGAGCCCAGAACAGCCTCTGAACCAGGAGAGTTGTCATTACAAATGGAACGATCATCAAACTCACTTGTCGGACGTCGTTCGACAGCTTTTAGAAGAAGAATGTATGGTCGACGTGACTCTTGTTGCCGATGGCGAACGCATACAAGCTCATCGTATCGTACTTTGCTCCTGCAGTACTTTGTTTCAAGAAATATTCAGTCAAGCAAATGAAGAACATGCAACAATAATATTAAGCGACATATCAGCCCAAGATGTAAGATCAATAGTGGAATTTAGTTATCACGGAGAAGTGAGAATTCCTGTTGAGAATATCAGCAATTTATTAGAGGCGGCTCATTCGTTGAGAATTTGTGGATTGATGGAGATTGACGGTTTGGATGAAAACGATGCGATAATAAGTGTGAAAGATTCAAAGGACGAGACTGAGTGTTTGGAAGATTTGGAAGAGTGTGTTGAAAATGATACGGAAATGTTGGAGGAAGAGACGCTTCGGTACGAGGATGTAAAACAAAGTTGCGAGCGTATGGAAAAAGGAATATCGAATAGAGGAAAAAAGCGTCAGAAAAGTAATTTGAAACGCGAGTACAACGATGAGATGCTTGCCGCAGCGATAAACGATCTCAAATCTGGCCAAACCCTCGTTGAAGCTTCCATCAAAAATAATATACCACGCTCGACTCTTTACATGAGAGCAAAAGCACTGGGAATACAATTGAATGCTTCTCGAAACGAATATCCAGCGGAATGCATGAAAGCTGCAATCGACGCAGTCATCCAAGGCTCCAGCTTGCAACATGCTTCCGACAAATTTTTTATACCCAAAACTGTGCTCTGGCGACGCATACAAAAAGAAGGATGTCAAATTTTACGAACCGAAGTCAAACGCTCCTATGGTCAGGAAAAAAGAGAGGCTGCAGTCAAGGCTCTTCAACGGGGAGAAAATTTAACTAAAGTTGCTCAACAATTTCAGATACCAAAGACAACGTTATTCCGTGAAAAAGTGAAACTCGTTGACGAAGGTAAATTGCCAGAATCATTTTGGAAGAAGAGAAAGACTGGAAACGAAGAATGGAAGAGAACGCGTTTGGAGGAAGCAGTTGCAGTTTGCAAAGAGGGTAAAATGTCGCAAGCTGCAGCAGCGATGAAATACAGAATCCCAAAAACAACGATTTGGCGACGATTGCAACAGGAGGGAAAAAATAATGCACGAGAAAATGCAAAAACTGCGGAACGTTCGTTAAACGAGTACGAAATTTCAGACAAAAACGAACAGGAAAGCTCCGAATTTGCTCTTTGCGAGGTATCTTCAGAAATTCCAATGACCTACATAGATTCGAATTTACCACCGGATTCGGTTATAATATTGACAACGGAAGACGTCGATGGTTTGAATCTCGACGAAAATCGACAATTGATCGTTAATCAGGATTCTGGACAGGAATACGTTCGATGTGCTTTGAACATAACAGACGACACAGAAGCCTCGGACTACCAGCAAGCGGACAGCTAA
Protein Sequence: MSTTTIIESPEQPLNQESCHYKWNDHQTHLSDVVRQLLEEECMVDVTLVADGERIQAHRIVLCSCSTLFQEIFSQANEEHATIILSDISAQDVRSIVEFSYHGEVRIPVENISNLLEAAHSLRICGLMEIDGLDENDAIISVKDSKDETECLEDLEECVENDTEMLEEETLRYEDVKQSCERMEKGISNRGKKRQKSNLKREYNDEMLAAAINDLKSGQTLVEASIKNNIPRSTLYMRAKALGIQLNASRNEYPAECMKAAIDAVIQGSSLQHASDKFFIPKTVLWRRIQKEGCQILRTEVKRSYGQEKREAAVKALQRGENLTKVAQQFQIPKTTLFREKVKLVDEGKLPESFWKKRKTGNEEWKRTRLEEAVAVCKEGKMSQAAAAMKYRIPKTTIWRRLQQEGKNNARENAKTAERSLNEYEISDKNEQESSEFALCEVSSEIPMTYIDSNLPPDSVIILTTEDVDGLNLDENRQLIVNQDSGQEYVRCALNITDDTEASDYQQADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00263631; iTF_00262776; iTF_00263356; iTF_00439621; iTF_00828906; iTF_00829643; iTF_00439383; iTF_00828695; iTF_00829403; iTF_01299076; iTF_01508996; iTF_00265861; iTF_00266373; iTF_01508777; iTF_01299406; iTF_00265592; iTF_00266589; iTF_01100739; iTF_01101474; iTF_01101965; iTF_01100500; iTF_01101237; iTF_01102197; iTF_01103685; iTF_01103460;
90% Identity: iTF_01299406;
80% Identity: iTF_00262776;