Oell027440.1
Basic Information
- Insect
- Ophion ellenae
- Gene Symbol
- klhl36
- Assembly
- GCA_963210295.1
- Location
- OY723395.1:35287369-35295758[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.5e-05 0.1 13.2 0.0 2 38 197 233 196 239 0.84 2 4 5.7e-11 1e-07 32.4 0.0 5 39 250 283 247 290 0.85 3 4 0.00068 1.2 9.7 0.0 6 35 303 331 298 336 0.84 4 4 1.6e-10 2.9e-07 30.9 0.0 5 39 362 396 361 400 0.94
Sequence Information
- Coding Sequence
- ATGTCAGACACAATAATAGAGAGCACGAGCGAGCGTGAACACGAGGAGAGTTATTTCAAATGGACGAACCATCAGAATCACTTGACGGACGTCGTTCGACAGCTTTTCGAGGAGGAATGCATGGTCGACGTGACTCTCGTCGCGGACGGGGAACGCATACAAGCCCATCGTATTGTTCTGTGCTCTTGCAGCACTTTGTTTCAAGAGATCTTTAGCCAGGCTAGCGGCGAACACGCTACAATTATATTGACCGACATATCAGCACAGGATGTCAGATCCATTGTGGAATTCAGCTACCACGGCGAAGTGAGAATTCCTGTCGAGAATATCAGCAACTTACTGAAGGCTGCCCATTCTCTGAGAATTTGCGGCCTCATGGAGATCGACGGACTGGACGAGAACGACGCGATAATAAGCGCGAAAGAATCGAAGGACGAGAACAGCGAGTCCTTCGAGGAGCTCGAGGAGTGCGCGAACGGCGCGCCGGAAATTCCCGAGGACTCGTCGAGTGACGGTCAGCGAAAGACCAAAGAGTCAGCCGGGAAGACGAAGAGGCGGAGGAAGGATCCACTGAAGCGCGACTACGACGACGAAATGCTCGCTTCGGCGATAAACGATCTGAAATCGGGGCAAACTCTCGTGGAGGCTTCGATAAAGAACAACGTGCCGCGCTCGACCCTCTACATGAGAGCCAAAGCACTCGGCATTCAATTGAACGCGTCGAGAAACGAGTATCCCGCTGAGTGCATGAAAGCCGCTATAGACGCGGTTGTGGAGGGCTCGAGTTTGCAACACGCGGCGGACAGATTTTTCATACCGAAAACCGTGCTCTGGCGACGCATACAAAAGGAGGGCTATCAAATATTGCGCGCCGAGGTGAGGCGCTCCTACGGTAGGGAAAAGCGAGAAGCCGCAGTCAAAGCGCTCCAACGGGGCGAAAATTTGACCAAAGTCGCAAAAAAATTTCAGATTCCAAAGACGACGTTGTTTCGCGAGAAAGCGAGGCTGGTCGACGAGGGAAAATTGCCGGCATCCTTTTGGAAGAAACGCAAGACCGAGAATGAGGAGCGGAAGAAGTCGTGTCTCGAGGAGGCGGTGGCGGTCTGTAAAGCGGGCAAAATGTCACAAGCCGCGGCGGCCATGAAGTACCGAATACCGAAAACGACGATATGGCGAAGGCTGCAACAAGACGGGAAGACTACCGGACGCGAGACTAATGCGCGAACGGTCGAACGCTCGTTTGACGACGAAGACAGCTCCATTAAGAACGAGCAAGAAAATACCGAATTTGCTTTTTGCGAGGTATCCTCGGAAATTCCAATAACGTACATAGATCAGAACCTCGGAGCTGATTCCGTTATAATATTGACAACGGAAGACGTCGATGGCCTGAATCTGGACGAGAGTAGGCAGATAATCGTGAACCAGGATTCCGGACAGGAGTATGTACGATGCGCTCTCGACATATCCGACAACACGGGAAGTTCGGAGTATCAGCCGGCGGAGAGCTAG
- Protein Sequence
- MSDTIIESTSEREHEESYFKWTNHQNHLTDVVRQLFEEECMVDVTLVADGERIQAHRIVLCSCSTLFQEIFSQASGEHATIILTDISAQDVRSIVEFSYHGEVRIPVENISNLLKAAHSLRICGLMEIDGLDENDAIISAKESKDENSESFEELEECANGAPEIPEDSSSDGQRKTKESAGKTKRRRKDPLKRDYDDEMLASAINDLKSGQTLVEASIKNNVPRSTLYMRAKALGIQLNASRNEYPAECMKAAIDAVVEGSSLQHAADRFFIPKTVLWRRIQKEGYQILRAEVRRSYGREKREAAVKALQRGENLTKVAKKFQIPKTTLFREKARLVDEGKLPASFWKKRKTENEERKKSCLEEAVAVCKAGKMSQAAAAMKYRIPKTTIWRRLQQDGKTTGRETNARTVERSFDDEDSSIKNEQENTEFAFCEVSSEIPITYIDQNLGADSVIILTTEDVDGLNLDESRQIIVNQDSGQEYVRCALDISDNTGSSEYQPAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262572;
- 90% Identity
- iTF_01102940;
- 80% Identity
- iTF_01101474;