Oven016631.1
Basic Information
- Insect
- Ophion ventricosus
- Gene Symbol
- klhl36
- Assembly
- GCA_963932345.1
- Location
- OZ010723.1:15452545-15456335[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.8e-05 0.063 13.2 0.0 2 38 199 235 198 241 0.84 2 4 3e-10 2.8e-07 30.3 0.0 5 39 252 285 249 292 0.85 3 4 0.0011 1 9.3 0.0 6 34 305 332 300 338 0.83 4 4 1.9e-11 1.7e-08 34.2 0.1 4 39 363 398 360 402 0.93
Sequence Information
- Coding Sequence
- ATGTCAAGCACAACAATAGAGAGCACGAGCGAGCGTGAACACGAGGAGAGTTATTATTACAAATGGACGAATCATCAGAATCACTTGTCGGACGTCGTACGACAGCTTTTGGAGGAGGAATGCATGGTCGACGTGACTCTCGTCGCGGACAGGGAACGCATACAAGCTCATCGTATTGTTCTCTGCTCTTGCAGCACTTTATTTCAAGAGATTTTTAGCCAGGCTAGCGGGGAACACGCCACAATAATATTGACCGACATATCGGCGCAGGATGTCAGATCCATAGTGGAATTCACTTACCACGGCGAAGTGAGAATTCCCGTCGAGAATATCAGCAACTTACTGGAGGCTGCGCATTCCCTGAGAATTTGCGGCCTCATGGAGATCGACGGACTGGACGAGAACGACGCGATAATAAGCGCGAAAGAATCGAGGGACGAGAACGGCGAGTCTTTCGAGGATCTCGAGGAATGCGTCAACGACGCGGCGAACATTCCCGAGGACTCGTTTTCGAGCGACAGTCCACGAAAGAACAAAGCGTTAGCCGGTAAGGGCAAGAAGCGCAGGAAGGATGCGCTGAAACGCGATTACGACGACGAAATGCTAGCTTCTGCGATAAACGATCTTaaatcgggccaaacactcgtcGAGGCTTCGATAAAGAACAACGTGCCACGTTCGACACTCTACATGAGAGCCAAAGCACTCGGTATTCAATTGAACGCTTCGAGAAACGAGTATCCCGCTGAGTGCATGAAAGCCGCTATAGACGCGGTAATTGAGGGCTCGAGTTTGCAACACGCGTCCGACAGATTTTTCATACCGAAAACCGTTCTTTGGCGACGCATACAAAAGGAGGGCTATCAAATATTGCGCAGCGAGGTGAAACGTTCGTAcgggagagaaaagagagaagcGGCTGTCAAGGCCCTCCAACGAGGCGAAAATTTGACCAAAGTCGCACAAGAATTTCAgATACCAAAGACGACGTTGTTTCGCGAAAAAGTTCGACTGGTCGACGAGGGAAAATTGCCTGAATCCTTTTGGAAGAAACGCAAAACCGAGAACGAAGAATGGAAGAAGTCGCGTCTCGAGGAGGCGGTTGCCGTTTGCAAAGAGGGCAAAATGTCTCAAGCCGCCGCGGCGATGAAATACCGAATACCGAAAACTACGATATGGCGAAGACTGCAGCAGGACGGGAAGTCTACCGGGCGCGAGGCGACACCGAGAACGCTGGAACGTTCGTTTGACAACGAGAAGGATAGTTCCGTTAAGAACGAGCAAGATAATACAGAATTTGCATTTTGCGAGGTATCTTCGGAAATTCCAATAACGTACATAGATCAGAACCTAGCAGCTGATTCCGTTATAATATTGACAACGGAAGACGTGGATGGCTTGAATCTCGACGAGAGCAGACAAATAATCGTCAATCAGGATTCTGGACAGGAGTATGTACGATGCGCTCTCAACATATCCGACAATACAGAGAGCTCAGACTATCAGCAGGCGGAAAGCTAG
- Protein Sequence
- MSSTTIESTSEREHEESYYYKWTNHQNHLSDVVRQLLEEECMVDVTLVADRERIQAHRIVLCSCSTLFQEIFSQASGEHATIILTDISAQDVRSIVEFTYHGEVRIPVENISNLLEAAHSLRICGLMEIDGLDENDAIISAKESRDENGESFEDLEECVNDAANIPEDSFSSDSPRKNKALAGKGKKRRKDALKRDYDDEMLASAINDLKSGQTLVEASIKNNVPRSTLYMRAKALGIQLNASRNEYPAECMKAAIDAVIEGSSLQHASDRFFIPKTVLWRRIQKEGYQILRSEVKRSYGREKREAAVKALQRGENLTKVAQEFQIPKTTLFREKVRLVDEGKLPESFWKKRKTENEEWKKSRLEEAVAVCKEGKMSQAAAAMKYRIPKTTIWRRLQQDGKSTGREATPRTLERSFDNEKDSSVKNEQDNTEFAFCEVSSEIPITYIDQNLAADSVIILTTEDVDGLNLDESRQIIVNQDSGQEYVRCALNISDNTESSDYQQAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262572;
- 90% Identity
- iTF_01103685;
- 80% Identity
- iTF_01103685;