Hdol015934.1
Basic Information
- Insect
- Hyposoter dolosus
- Gene Symbol
- klhl36
- Assembly
- GCA_963921915.1
- Location
- OY998138.1:9379007-9381338[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0001 0.064 13.1 0.0 2 37 205 240 204 246 0.86 2 4 3.1e-10 1.9e-07 30.8 0.0 5 43 258 296 255 298 0.86 3 4 0.0057 3.6 7.5 0.0 7 34 312 338 308 348 0.83 4 4 1.4e-11 8.9e-09 35.1 0.1 3 39 368 404 366 408 0.93
Sequence Information
- Coding Sequence
- ATGTCAACAACAATAACAGAGAGCCCGGAACAACCTTCAAACGAGGAGAGCTGCTATTACAAATGGACCGATCATCAAGCACACTTGTCGGACGTTGTTCGACAGCTTTTAGAAGAGGAATGTATGGTCGACGTGACCCTCGTAGCCGATGGCGAACGCATACAAGCCCATCGTATTGTACTTTGCTCATGCAGTACTTTATTTCAAGAAATATTCAGTCAAGCCAACGAAGAACATACGACGATAATATTAAGCGACATATCAGCCCAAGATGTAAGATCGATCGTGGAATTCAGTTACCACGGGGAAGTAAGAACCCCCGTAGAGAATATCAGCAATCTACTGGAGGCGGCTCATTCGCTGAGGATTTGCGGCCTCATGGAGATTGACGGCCTGGATGAAAATGATGCAATAATAAGTGTGAAAGATCCCAGGGACGAGGGCAGCGACTGTTTGGAAGATTTGGAAGGCTGCGTAGAGAACGACACGGAAATCTTGGAATCAGATCCGCTCTCGTGCCAGAGCGTCAAACAAAGTTGCGAGCGCACGGAAAAGGGAATATCGAACAAAGGAAAACGGcgtcagaaaaataatttgaaacgCGAATACAGCGACGAGATGCTCGCTTCTGCGATAAATGATCTCAAGTCGGGCCAAACCCTTGTCGAGGCTTCCATAAAGAATAACATTCCACGCTCCACCCTTTATATGAGAGCCAAAGCGTTCGGAATACAATTAAACGCCTCGCGAAACGAATATCCAGCGGAATGCATGAAAGCTGCCATCGACGCAGTCATCCAAGGCTCCAGCTTGCAACACGCCTcagacaaatttttcatacccAAAACTGTTCTCTGGCGGCGCATACAAAAAGAAGGATATCAGGTTTTACGCACGGAAGTGAAACGCTCGTACGGCCAGGATAAAAGAGAGGCTGCCGTAAAGGCTCTGCAACGGGGAGAAAATTTGACTAAAGTCGCTCAACAATTTCAGATTCCAAAAACGACGCTATTCCGTGAGAAAGTGAAGCTGGTTTATGAGGGAAAATTGCCAGAATCCTATTGGAAAAAGCGAAAGACTGAAAACGAGGAATGGAAGAAAACGCGTTTGGAGGAAGCGGTCGCAGTTTGCAAAGCGGGAAAAATGTCGCAAGCCGCAGCGGCGATTAAGTACAGGATTCCAAAAACAACCATTTGGCGACGGTTGCAACAGGAAGGGAAAAACAATGCgagagaaaatgcaaaaaccgtGGATCGTTCGTTGAACGAATACGAAGCTGCGAATAAAAACGGAGAAAGCTCTGAATTTACACTTTGCgaggTTTCTTCGGAAATTCCAATGACTTACATAGACTCGAATTTACCAGCTGATTCGGTTATAATTTTGACTACAGACGACGTTGATGGTCTCAATCTTGACGAGAATCGCCAGCTGATCGTGAATcaggattCTGGACAGGAATACGTTCGATGTGCTCTAAACATTACCGACGACACGGAAGCCTCGGACTACCAGCAAGCGGAGAgctaa
- Protein Sequence
- MSTTITESPEQPSNEESCYYKWTDHQAHLSDVVRQLLEEECMVDVTLVADGERIQAHRIVLCSCSTLFQEIFSQANEEHTTIILSDISAQDVRSIVEFSYHGEVRTPVENISNLLEAAHSLRICGLMEIDGLDENDAIISVKDPRDEGSDCLEDLEGCVENDTEILESDPLSCQSVKQSCERTEKGISNKGKRRQKNNLKREYSDEMLASAINDLKSGQTLVEASIKNNIPRSTLYMRAKAFGIQLNASRNEYPAECMKAAIDAVIQGSSLQHASDKFFIPKTVLWRRIQKEGYQVLRTEVKRSYGQDKREAAVKALQRGENLTKVAQQFQIPKTTLFREKVKLVYEGKLPESYWKKRKTENEEWKKTRLEEAVAVCKAGKMSQAAAAIKYRIPKTTIWRRLQQEGKNNARENAKTVDRSLNEYEAANKNGESSEFTLCEVSSEIPMTYIDSNLPADSVIILTTDDVDGLNLDENRQLIVNQDSGQEYVRCALNITDDTEASDYQQAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262572;
- 90% Identity
- iTF_00439621;
- 80% Identity
- iTF_00829643;