Cnol007436.1
Basic Information
- Insect
- Campoplex nolae
- Gene Symbol
- klhl36_1
- Assembly
- GCA_037893425.1
- Location
- JBBLXU010001781.1:2029737-2032872[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.6e-05 0.047 13.4 0.0 3 38 206 241 204 247 0.83 2 4 3.8e-11 4.9e-08 32.6 0.0 5 39 258 291 255 298 0.85 3 4 0.003 3.9 7.3 0.0 7 34 312 338 308 344 0.84 4 4 1.8e-11 2.4e-08 33.6 0.0 5 39 370 404 368 408 0.94
Sequence Information
- Coding Sequence
- ATGTCAACAACAATAACAGAGAACCAAGAACAACCTCAAAATGAAGAGAGCTGCTATTACAAATGGACCGATCATCAGACTCATTTGTCGGACGTTGTTCGACAACTTTTAGAGGAGGAATGTATGGTCGACGTGACTCTCGTTGCCGATGGCGAACGCATACAAGCTCATCGCATTGTACTGTGTTCTTGCAGTACTTTGTTTCAAgaAATATTTAGTCAAACAAATGAGGAACATGCGACAATAATATTAAGCGACATATCAGCGCAAGATGTAAGATCGATTGTGGAATTTAGTTATCACGGGGAAGTGAGAACCCCTGTTGAAAACATCAGCAATCTTTTGGAGGCTGCTCATTCGTTAAGAATTTGTGGTCTTATGGAGATCGATGGTTTGGACGAAAATGATGCAATAATAAGTGCGAAAGATACCAAGGATGAAAGCTCAGAGTGTTTGGAGGACTTTGAGGAGTGCGTTGATAACGACACAGAAATGTTGGATGATGATCCCCTTTTGTACAAAGAAGTTGAACAAAGTTGCGAGAGCATGGATAAGGGTATGTCAAATAAAGGGAAGAAGcgtcagaaaaataatttgaaacgcGACTACAACGATGAGATGCTTGCGTCAGCGATAAACGATCTCAAATCAGGCCAAACCCTTGTTGAAGCTTCcatcaaaaataatataccaCGCTCAACTCTTTACATGAGGGCGAAAGCCCTGGGAATACAATTAAACGCTTCTCGAAACGAATATCCAGCGGAATGCATGAAAGCTGCCATCGAAGCAGTCATTGAAGGCTCAAGTTTGCAACACGCttctgacaaattttttatacccaAAACCGTTCTATGGCGACGCATACAAAAAGAAGGATATCAGATCCTCCGTAGTGGGGTCAAACGCGCCTAtggacaagaaaaaagagaggctGCTGTCAAAGCCCTACAGCGAGGAGAAAATTTAACTAAAGTTGCTCAACAATTTCAGATACCAAAAACGacattatttcgtgaaaaagtgAAGCTCGTCGACGAGGGCAAACTGCCAGAATCTTTTTGGAAGAAACGCAAAACTGGAAAcgaggaatggaaaaaaatgcgtttggAAGAAGCGGTTGCACTTTGCAAAGAGGGCAAAATGTCGCAGGCTGCAGCAGCGATGAAATATAGAATTCCGAAAACGACGATTTGGCGCCGATTGCAACAGGAGGGAAAAAATACTGCACGAGAAAATGCGAAAGCTGCTGAACGTTCGTTGAACGAGTACGAAATCTcgggaaaaaatgtacaggACAGCTCCGAATTTGCTCTTTGCGAGgtATCCTCCGAAATTCCAATGACTTACATAGACTCGAATTTGCCGGCCGATTCCGTAATAATATTGACGACGGAAGATGTGGATGGTTTgaatttggacgaaaatagaCAATTGATCGTTAATCAGgattcTGAACAATACGTTCGATGTGCTTTGACGATAACCGACGACGCAGAAGCCTCGGATTATCAGCAAGCGGAGAGCTAA
- Protein Sequence
- MSTTITENQEQPQNEESCYYKWTDHQTHLSDVVRQLLEEECMVDVTLVADGERIQAHRIVLCSCSTLFQEIFSQTNEEHATIILSDISAQDVRSIVEFSYHGEVRTPVENISNLLEAAHSLRICGLMEIDGLDENDAIISAKDTKDESSECLEDFEECVDNDTEMLDDDPLLYKEVEQSCESMDKGMSNKGKKRQKNNLKRDYNDEMLASAINDLKSGQTLVEASIKNNIPRSTLYMRAKALGIQLNASRNEYPAECMKAAIEAVIEGSSLQHASDKFFIPKTVLWRRIQKEGYQILRSGVKRAYGQEKREAAVKALQRGENLTKVAQQFQIPKTTLFREKVKLVDEGKLPESFWKKRKTGNEEWKKMRLEEAVALCKEGKMSQAAAAMKYRIPKTTIWRRLQQEGKNTARENAKAAERSLNEYEISGKNVQDSSEFALCEVSSEIPMTYIDSNLPADSVIILTTEDVDGLNLDENRQLIVNQDSEQYVRCALTITDDAEASDYQQAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262572;
- 90% Identity
- iTF_01299406;
- 80% Identity
- iTF_00266589;