Acir015676.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Athalia circularis
Gene Symbol
Hr39
Assembly
GCA_963978495.1
Location
OZ021700.1:24128992-24134326[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5 2.5e+04 -13.3 25.7 63 164 209 311 183 396 0.52
2 4 5 2.5e+04 -5.7 6.5 85 132 342 398 314 442 0.40
3 4 6.2e-08 0.00031 20.7 0.0 1 21 509 529 509 533 0.92
4 4 1.9e-68 9.3e-65 220.1 7.5 191 408 632 839 551 839 0.89

Sequence Information

Coding Sequence
ATGTCGGAGCAGAACGGGCCCCCGGAGGGCCCAGGCTGGTGGCCCCCGGCTCAATCCTGGAAGTCGTCATCGGCCCCTGCAAGACCAGAGGCGGGAAGAAACGTATCTGTGACTACCATCAACGTTCCACCAGCCCACGAAATGCATGACGGTAAAAATGTGAAGTATTTGGGTGGTCGGAACGGTGTGACGGTGTCGGTCGTGTCCGGATGCGCTACCGGAAATGAACCGGAGAACGACGGAGCGGATAGCGACGGTGAAGTAAGCAAGATCGATTTCCGGGGAGTAAATCTCCgcacgaaaaagaaaagggacgCGCCAGAAGGACAGGAAAGCGACGCTAGCACCATCACCGAGGCGATGCTGCAACAGCCGGAACGCCCCATGTCCTGGGAGGGTGAACTTTCCGATCAAGAAATGTCCTCCAATACAATCACCAATCAAGACCATGAAGAAACATCAATGGAAGGTGTTCAAGTCTGCAGCGCAAGCCCAGGACCAACACATGCACCACAGGAGCCTAAATTCCCTATAAAACTCGAGCCAGAATTTCGCTCGAGTCCTGGGCCACCTTTAGGTACCCCTAACGAGACAATACTATCCAATTCTCAAcaacaccaacaacaacatcaacaccaccaacagcaacaacaacaacatcaacatcaacatcaacatcaTCAACAGCAACAGCTCAATATTGACGGACTTGAGCAAACTCAACAGAGTGATTTACCATTACTTGTTGGGAAACTGCTTGGAGGATATAACAATGCAACTCCTAGCCACAGTCCAGTCCTTAATCCAAGACATCATTTGACTAAACATAGTCACACAAGATCACAGGTCCCATCGCCAGATTCGGCGATACATTCAGCATACAGCGTATTTAGCTCCCCGACACAAAGTCCTCATGCCGCTCGTCACTCGGCGCTCGGAGCTGGAAGTCCTGTGCCTTCTTCATCTTTGTCACTTTCCCGCCACAGTTTCAACAATTCTACATCCTCACTATCTTTGTCTCTCTCGCATTCGCTTTCGCGAAATAACTCTGATGCATCCAGCAGCTGCTATAGTTACGGATCTCTCAGCCCACCTACACATTCGCCTGTGCAACAACCGAGACACTCCCACTCTCATACTTCACATCCACATCATCAAGTAGCACCACAAAGCAGTCCTCTACATTTGCCAGTATCGCATCATTATTCAGCTGCAAATTCGGAACTTTCCGAAGGGTTGAGTGAGGATCAGGAAGACTGTAAAATAGCACCAGCTACGGCAGGCATTTCAACTAGGCAACAGTTAATCAATAGTCCCTGCCCGATCTGCGGTGATAAAATTAGTGGGTTTCACTACGGTATATTCTCTTGCGAATCTTGTAAGGGATTCTTCAAAAGGACAGTGCAGAATCGAAAGAATTATGTATGCCTTAGAGGAGCGGGATGTTCGGTTACTGTGGCTAcccgaaaaaaatgtccagcTTGTCGATTTGACAAATGTTTAAATATGGGAATGAAGTTGGAAGCAATTAGGGAAGATCGGACCCGAGGTGGAAGAAGTACATATCAGTGTAGTTACACGCTCCCAGCAAACTTGGTGGGTTGTACTTCCGGTGGATTACCTGGGGATAAAATGGTCGGAGGAACATGCAGTCCTGCACCACCTGGGTATGAACATCACCACTCGGCAAGGCACCACTCAAATCACTCGCATAAACTGCACGTGGTGCCGCAGTTGTTGCAAGAAATTATGGATGTGGAACATTTGTGGCATTATAATGACAATGATCGAACAACAAGTGCGCAAAGTAGTAGCAGCAGTAGCAAATCAGAGCAGCCCAGGCCCAGTTCTGTAGGGCCACAAAACACCGAACATGATCCGCACTCACCCAGCAATGCTAATACAAATGCTAATCCATCACAGCATCCAGACTTTTTGTCAAACCTGTGCAATATTGCAGATCATAGGCTTTATAAAATTGTTAAGTGGTGCAAGAGTTTGCCTCTCTTTAAAAACATTTCAATCGATGATCAAATTTGTCTCCTTATCAATTCATGGTGTGagttgttgttattttcatgCTGCTTCAGGAGCGTGAATACACCAGGAGAGATTAGAGTCTCTCTTGGGAAATCAATCACACTCGAACAAGCCAGACAGCTGGGTCTCGCTAGCTGCATTGAAAGAATGCTTGCTTTTACCAACAACCTTAGACGATTGCGGGTGGACCAATACGAGTACGTCGCAATGAAGGTCATTGTCCTGCTGACATCTGACACGAGCGAGTTGAAAGAGCCAGAAAAGGTTCGAGCATCACAGGAGAAAGCATTGCAGGCGTTGCAACAGTACACCATTGCCATGTATCCGGAAATGCCAGCCAAGTTTGGTGAACTGCTCCTTCGAATCCCAGATCTGCAGCGAACTTGTCAAGCAGGGAAGGAGCTGCTCAGTGCAAAACGAGCAGAAGGAGAGGGTAGTTCCTTCAACCTATTGATGGAACTGCTACGAGGGGACCACTGA
Protein Sequence
MSEQNGPPEGPGWWPPAQSWKSSSAPARPEAGRNVSVTTINVPPAHEMHDGKNVKYLGGRNGVTVSVVSGCATGNEPENDGADSDGEVSKIDFRGVNLRTKKKRDAPEGQESDASTITEAMLQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCSASPGPTHAPQEPKFPIKLEPEFRSSPGPPLGTPNETILSNSQQHQQQHQHHQQQQQQHQHQHQHHQQQQLNIDGLEQTQQSDLPLLVGKLLGGYNNATPSHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHSHTSHPHHQVAPQSSPLHLPVSHHYSAANSELSEGLSEDQEDCKIAPATAGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCSVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCSYTLPANLVGCTSGGLPGDKMVGGTCSPAPPGYEHHHSARHHSNHSHKLHVVPQLLQEIMDVEHLWHYNDNDRTTSAQSSSSSSKSEQPRPSSVGPQNTEHDPHSPSNANTNANPSQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVNTPGEIRVSLGKSITLEQARQLGLASCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAMYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH