Malb001869.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- Hr39
- Assembly
- GCA_949628255.1
- Location
- OX451206.1:17492608-17497214[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3 3.4e+04 -13.6 19.2 80 164 207 292 100 400 0.61 2 4 3.7e-08 0.00041 20.8 0.0 1 21 490 510 490 514 0.92 3 4 0.04 4.5e+02 0.9 2.3 88 151 547 604 521 621 0.49 4 4 9.2e-71 1e-66 227.0 0.6 199 408 616 820 604 820 0.96
Sequence Information
- Coding Sequence
- ATGTCGGAGCAGAACGGGCCCCCGGAGGGCCCAGGCTGGTGGCCTCCGGCCCAATCCTGGAAGTCGTCGTCGGCCCCTGCGAGACCAGAAGCCGGAAAAAACGTATCTGTGACCACCATCAACGTTCCACCAGCCCACGAAATGCATGATGGTAAAAATGTTAAGTATTTGGGCGGTCGGAACGGTGTTACGGTGTCCGTTGTGTCCGGATGCGGTACCGGAAATGAACCCGAAAACGACGGAGCTGACAGCGACGGTGAAGTGAGCAAGATCGACTTCCGGGGTGTAAATCTACggacgaagaaaaagagggACGCGCCAGAAGGCCAGGAAAGCGATGCCTGTAGCACCGTTACAGAGGCGATGCTACAGCAACCAGAACGCCCCATGTCCTGGGAAGGAGAACTTTCCGATCAGGAAATGTCTTCGAATACAATTACTAATCAAGACCATGAAGAAACTTCAATGGAAGGTGTTCAAGTGTGTAATGCGAGCCCAGGACCAACGCACGCACCACAAGAGCCCAAATTCCCCATAAAACTTGAGCCAGATTTCCGCTCAAGTCCAGTCCCGCCTTTAGGACCCCCCAATGAAACAATCCTCTCAAACacccaacaacaacaacagcagcaacaacaccATATCGAAGGGCTTGAGCAAACCCAACAAAGCGATTTGCCATTACTTGTTGGGAAACTACTCGGAGGATATAATAATGCTACCCCTAATCACAGCCCAGTTCTTAATCCAAGACATCATCTGACTAAACATAGCCACACGAGATCACAGGTTCCATCACCTGATTCAGCGATACATTCAGCATACAGTGTATTCAGCTCCCCTACACAAAGTCCACATGCTGCTCGACATTCGGCGCTTGGAGCTGGTAGCCCTGTGCCGTCTTCGTCGTTGTCACTTTCGCGTCATAGTTTCAACAATTCCACATCTTCGCTTTCCTTGTCGCTATCACATTCGCTCTCGCGAAATAACTCGGATGCATCCAGCAGCTGTTACAGCTATGGGTCTCTAAGTCCACCGACACATTCGCCTGTGCAACAGCCTAGGCACTCCCACTCCCATACTTCACATCCTCATCATCAGGTTGGAGCGCAGGGTAGCCCTCTGCATTTGCCAGTATCCCATCATTATTCAACAACAAATTCTGAGCTTTCCGAAGGCTTGAGCGAGGACCAGGAAGACTGTAAAATAGCACCAGCTACGGCGGGAATTTCGACTAGGCAACAGCTGATTAATAGTCCCTGTCCAATTTGCGGTGACAAAATCAGCGGCTTCCATTACGGTATATTCTCGTGCGAATCGTGCAAAGGATTTTTCAAAAGGACCgtacaaaacagaaaaaattacgTCTGCCTTAGAGGGGCGGGATGCTCGGTGACTGTGGCAACCCGAAAAAAGTGTCCTGCTTGTAGATTTGATAAATGTTTGAATATGGGAATGAAATTGGAAGCAATTAGGGAAGATAGAACTCGAGGAGGTAGAAGTACGTATCAGTGTAGTTACACGCTTCCGGCGAATTTGGTTGGCTGTAATTCTGGTGGATTACCTGGTGACAAAATGGCTGGTGGAACTTGTAGTCCTGCACCTCCTGGATACGAACATCACCATTCGGCAAGGCATCATTCTAATCATTCGCATAAACTCCACGTAGTGCCGCAGCTTTTACAAGAAATTATGGACGTCGAACACTTGTGGCATTATAATGACAATGATAGAACTACAAGTGCGCagagcagtagcagtagcaccAAATCAGAACAGCCAAGGCCGAGCTCTGCGGGACCACAAAACACCGAACATGACCAACACCCACCTAGTAATGCTAATAGTAATGCGAACTCTTCTCAGCATCCTGACTTTTTGTCTAACCTGTGCAATATCGCAGATCATAGGCTTTATAAAATCGTTAAATGGTGCAAGAGCTTGCCCTTAtttaaaaacatttcaattgaTGATCAAATTTGTCTACTTATCAATTCATGGTGCGAATTGTTGCTGTTCTCATGCTGCTTTAGAAGCGTCAATACTCCAGGAGAGATTCGTGTCTCACTTGGGAAGTCGATAACACTTGAACAAGCCAGACAGCTCGGTCTTGCTAGTTGCATCGAAAGAATGTTGGCTTTCACCAACAACCTTAGGCGATTGAGAGTCGACCAATACGAATACGTAGCAATGAAGGTCATTGTTCTGCTGACTTCTGACACAAGCGAGTTAAAAGAACCAGAAAAAGTTAGAGCATCTCAAGAAAAAGCACTTCAAGCATTACAGCAATATACAATTGCAATGTATCCAGAAATGCCAGCCAAATTTGGCGAACTGCTCCTCAGAATCCCAGACTTGCAGCGAACATGCCAAGCAGGCAAGGAGCTTCTCAGTGCAAAACGAGCCGAGGGAGAAGGCAGttcattcaatttattgaTGGAACTGCTCAGAGGGGACCACTGA
- Protein Sequence
- MSEQNGPPEGPGWWPPAQSWKSSSAPARPEAGKNVSVTTINVPPAHEMHDGKNVKYLGGRNGVTVSVVSGCGTGNEPENDGADSDGEVSKIDFRGVNLRTKKKRDAPEGQESDACSTVTEAMLQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCNASPGPTHAPQEPKFPIKLEPDFRSSPVPPLGPPNETILSNTQQQQQQQQHHIEGLEQTQQSDLPLLVGKLLGGYNNATPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHSHTSHPHHQVGAQGSPLHLPVSHHYSTTNSELSEGLSEDQEDCKIAPATAGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCSVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCSYTLPANLVGCNSGGLPGDKMAGGTCSPAPPGYEHHHSARHHSNHSHKLHVVPQLLQEIMDVEHLWHYNDNDRTTSAQSSSSSTKSEQPRPSSAGPQNTEHDQHPPSNANSNANSSQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVNTPGEIRVSLGKSITLEQARQLGLASCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAMYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00174217;
- 90% Identity
- iTF_00938835;
- 80% Identity
- iTF_00938835;