Basic Information

Insect: Rhogogaster chlorosoma
Gene Symbol: Hr39
Assembly: GCA_944452905.1
Location: CALYCC010000058.1:1038299-1042665[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 4 3.5e+04 -8.8 16.4 37 163 195 314 100 375 0.63

2 3 4.9e-08 0.00043 20.8 0.0 1 21 493 513 493 517 0.92

3 3 4.6e-69 4.1e-65 221.8 5.7 201 408 618 823 526 823 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	4	3.5e+04	-8.8	16.4	37	163	195	314	100	375	0.63
2	3	4.9e-08	0.00043	20.8	0.0	1	21	493	513	493	517	0.92
3	3	4.6e-69	4.1e-65	221.8	5.7	201	408	618	823	526	823	0.91

Sequence Information

Coding Sequence: ATGTCGGAGCAGAACGGGCCCCCGGAGGGCCCAGGCTGGTGGCCTCCGGCCCAATCCTGGAAATCGTCGTCGACCCCTGCGAGGCCAGAAGCCGGAAAAAACGTATCTGTGACTACCATCAATGTTCCACCAGCCCATGAAATGCATGATGGTAAAAATGTTAAATATTTGGGCGGTCGGAACGGTGTGACGGTGTCCGTTGTGTCCGGACGCGGGACCGGAAATGAACCCGAAAATGACGGAGCGGACAGCGACGGTGAAGTTAGTAAGATCGACTTCCGGGGAGTGAATTTACGCACGAAGAAAAAGAGGGATGCGCCAGAAGGCCAGGAAAGCGATGCCAGCACCGTTACAGAGGCGATGCTACAGCAACCAGAACGCCCCATGTCCTGGGAAGGAGAACTTTCCGATCAGGAAATGTCTTCGAATACAATTACTAATCAAGACCATGAAGAAACTTCAATGGAAGGAGTTCAAGTGTGCAGTGCCAGCCCAGGACCAGCACACGCACCACAAGAGCCCAAATTTCCCATAAAACTTGAGCCAGATTTTCGCTCAAGCCCAGCCCCATCTCTAGGACCCCCGAATGATATAACCCTATCAAACACCCAACAACAACAACAACAACACCAACAACAACACCAACACAATATCGACGGGCTTGAGCAAAACCAACAAAGTGATTTGCCATTACTCGTTGGAAAACTACTCGGAGGATATAACAACGCTACTCCTAATCACAGCCCGGTTCTCAACCCAAGACATCATCTGACCAAACATAGCCACACTAGATCACAGGTTCCATCGCCAGATTCGGCGATTCATTCAGCCTACAGTGTATTTAGTTCCCCTACCCAAAGCCCACACGCTGCTCGTCACTCAGCGCTTGGAGCTGGAAGCCCTGTGCCGTCTTCATCGTTGTCACTCTCACGTCACAGTTTCAACAATTCCACATCCTCGCTTTCCTTGTCGCTATCACACTCGCTGTCCCGAAACAACTCGGATGCATCCAGCAGCTGTTATAGCTATGGGTCTCTAAGCCCGCCGACACATTCGCCTGTTCAACAACCGAGGCACTCTCACTCGCATACTTCGCATCCTCATCATCAGGTCGGAGCACAGGGTAGCCCTCTGCATTTGCCAGTATCTCATCATTATTCGACGACAAATTCAGAGCTTTCTGAAGGGTTGAGTGAGGACCAGGAAGACTGTAAGATAGCTCCAGCTACAGCAGGAATTTCCACTAGGCAACAGCTCATTAATAGCCCCTGTCCAATCTGTGGTGATAAAATAAGCGGCTTTCATTACGGTATATTCTCGTGCGAATCCTGCAAAGGATTCTTCAAGAGAACCGTACAGAACAGGAAAAATTACGTCTGCCTTAGGGGAGCAGGGTGCTCGGTGACTGTAGCAACACGAAAAAAGTGCCCTGCTTGTAGGTTTGACAAATGCCTGAATATGGGAATGAAGCTGGAAGCTATCAGAGAAGACAGAACTCGGGGAGGCAGAAGTACCTATCAATGCAGTTACACACTACCAGCTAATTTGGTCGGCTGTACTTCCGGAGGATTACCTGGCGACAAAATGGCTGGCGGAACATGCAGCCCTGCGCCACCTGGATACGAACATCACCATTCGGCGAGGCACCACTCTAATCATTCGCATAAACTTCACGTTGTGCCGCAATTGTTACAAGAAATAATGGACGTCGAACATTTGTGGCATTATAATGACAATGATAGAACTACTAGTGCCCAAAGCAGTGGCAGTAGCACTAAATCCGAACAGCCTAGGCCAAGCTCTGCGGGACCTCAGAATACCGAACATGAACAACACCCACCTAGTAATGCTAATAGTAACGCAAACCCTTCCCAGCATCCAGACTTTTTGTCTAATCTGTGCAATATCGCAGATCATAGACTTTATAAAATCGTCAAATGGTGCAAAAGCTTGCCCCTATTTAAGAACATTTCGATTGACGATCAAATTTGTCTTCTTATAAATTCTTGGTGCGAATTGTTGCTGTTCTCATGCTGCTTTAGAAGTGTTAATACTCCGGGAGAGATTAGAGTCTCACTTGGCAAGTCAATTACACTTGAACAAGCCAGACAACTCGGTCTCGCTAGTTGCATCGAAAGAATGTTGGCTTTCACCAATAACCTTAGGCGATTGAGAGTCGACCAATATGAATACGTCGCAATGAAGGTCATTGTTTTACTGACTTCTGACACGAGCGAGTTGAAAGAGCCAGAAAAAGTTCGAGCATCTCAAGAGAAAGCGTTGCAGGCATTACAGCAATATACTATTGCAATGTATCCAGAAATGCCAGCAAAATTTGGCGAACTACTTCTTAGGATCCCAGACTTGCAGAGAACATGCCAAGCAGGGAAGGAATTACTCAGTGCTAAACGAGCCGAGGGAGAAGGCAGTTCGTTTAATTTATTGATGGAACTGCTCAGAGGGGACCACTGA
Protein Sequence: MSEQNGPPEGPGWWPPAQSWKSSSTPARPEAGKNVSVTTINVPPAHEMHDGKNVKYLGGRNGVTVSVVSGRGTGNEPENDGADSDGEVSKIDFRGVNLRTKKKRDAPEGQESDASTVTEAMLQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCSASPGPAHAPQEPKFPIKLEPDFRSSPAPSLGPPNDITLSNTQQQQQQHQQQHQHNIDGLEQNQQSDLPLLVGKLLGGYNNATPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHSHTSHPHHQVGAQGSPLHLPVSHHYSTTNSELSEGLSEDQEDCKIAPATAGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCSVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCSYTLPANLVGCTSGGLPGDKMAGGTCSPAPPGYEHHHSARHHSNHSHKLHVVPQLLQEIMDVEHLWHYNDNDRTTSAQSSGSSTKSEQPRPSSAGPQNTEHEQHPPSNANSNANPSQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVNTPGEIRVSLGKSITLEQARQLGLASCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAMYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00174217;
90% Identity: iTF_00938835;
80% Identity: iTF_01303537; iTF_01303385;