Basic Information

Insect: Athalia cordata
Gene Symbol: Hr39
Assembly: GCA_963932425.1
Location: OZ010625.1:38109218-38114531[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.91 4.1e+03 -3.2 0.2 87 132 110 154 89 175 0.58

2 5 0.17 7.7e+02 -0.8 16.5 52 163 196 310 182 326 0.55

3 5 0.83 3.8e+03 -3.0 2.6 84 129 344 398 315 443 0.42

4 5 5e-08 0.00023 20.7 0.0 1 21 512 532 512 536 0.92

5 5 1.7e-69 7.6e-66 223.2 5.0 201 408 636 842 547 842 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.91	4.1e+03	-3.2	0.2	87	132	110	154	89	175	0.58
2	5	0.17	7.7e+02	-0.8	16.5	52	163	196	310	182	326	0.55
3	5	0.83	3.8e+03	-3.0	2.6	84	129	344	398	315	443	0.42
4	5	5e-08	0.00023	20.7	0.0	1	21	512	532	512	536	0.92
5	5	1.7e-69	7.6e-66	223.2	5.0	201	408	636	842	547	842	0.88

Sequence Information

Coding Sequence: ATGTCGGAGCAGAACGGGCCCCCGGAGGGCCCAGGCTGGTGGCCCCCGGCCCAATCCTGGAAGTCGTCATCGGCCCCTGCAAGACCAGAGGCGGGAAGAAACGTATCTGTGACTACCATCAACGTTCCACCAGCCCACGAAATGCATGACGGTAAAAATGTGAAGTATTTGGGTGGTCGGAACGGTGTGACGGTGTCGGTCGTGTCCGGATGCGCTACCGGGAATGAACCGGAAAACGACGGAGCGGATAGCGACGGTGAAGTAAGCAAGATCGATTTCCGGGGAGTAAATCTCCgcacgaaaaagaaaagggacgCGCCAGAAGGACAGGAAAGCGACGCTAGCACCATCACCGAAGCGATGTTGCAGCAGCCGGAACGCCCCATGTCCTGGGAGGGTGAACTTTCCGATCAAGAAATGTCCTCCAATACAATCACCAATCAAGACCATGAAGAAACATCAATGGAAGGTGTTCAAGTCTGCAGCGCAAGCCCAGGACCAACACATGCACCACAGGAGCCTAAATTCCCTATAAAACTCGAGCCGGAATTTCGCTCGAGTCCTGGGCCACCTTTAGGCACCCCTAATGAGACAACACTATCCAACTCTCAGcaacaccaacaacaacatcaacaacaacaccaccaacagcaacaacatcaacatcaacatcatcaacagcaacagcaacaccAGCAACAGCTCAATATTGACGGACTTGAGCAAACTCAACAAAGCGATTTACCATTACTTGTTGGAAAACTGCTTGGAGGATATAACAATGCAACTCCTAGCCACAGTCCAGTCCTTCATCCAAGACATCATCTGACTAAACATAGTCACACAAGATCACAGGTCCCATCACCAGATTCGGCGATACATTCAGCATACAGCGTATTCAGCTCCCCGACACAAAGTCCTCATGCCGCTCGTCACTCGGCGCTCGGAGCTGGAAGTCCTGTGCCTTCTTCATCTTTGTCACTTTCCCGCCACAGTTTCAACAATTCTACATCCTCACTATCTTTGTCTCTCTCGCATTCGCTTTCGCGAAATAACTCTGATGCATCCAGCAGCTGCTACAGTTACGGATCTCTCAGTCCACCCACACATTCGCCTGTGCAACAACCGAGACACTCCCACTCTCATACTTCACACCCACACCATCAAGTAGCACCACAAGGCAGTCCTCTACATTTGCCAGTATCGCATCATTATTCAGCAACAAATTCGGAACTTTCCGAGGGGTTGAGTGAGGATCAGGAGGACTGTAAAATAGCACCAGCTACGGCAGGCATTTCAACTAGGCAACAGTTAATCAATAGCCCCTGCCCTATCTGTGGTGATAAAATTAGTGGTTTTCACTACGGTATATTCTCTTGCGAGTCTTGTAAGGGATTCTTCAAAAGGACAGTACAGAATCGAAAGAATTATGTATGCCTTAGAGGAGCTGGATGTTCGGTTACTGTGGCTACccgaaaaaaatgtccagCTTGTCGATTTGACAAATGTTTAAATATGGGAATGAAGTTGGAAGCAATTAGGGAAGACCGGACCCGAGGTGGTAGAAGTACATATCAGTGTAGTTACACGCTCCCAGCAAACTTGGTGGGTTGTACTTCCGGTGGATTACCTGGGGATAAAATGCTCGGAGGAACATGCAGTCCTGCACCACCTGGGTACGAACATTACCACTCGGCAAGGCACCATTCAAATCACTCGCATAAACTGCACGTGGTGCCGCAGTTGTTGCAAGAAATTATGGATGTGGAACATTTGTGGCATTATAATGACAATGATCGAACAACAAGTGCGCAAAGTAGTAGCAGCAGTAGCAAATCAGAGCAGCCTAGGCCCAGTTCTGTAGGGCCACAAAACACCGAACATGATCCGCACCCACCCAGCAATGCTAATACAAATGCGAATTCATCGCAGCATCCAGACTTTTTGTCAAACCTGTGCAATATTGCAGATCATAGGCTTTATAAAATTGTTAAGTGGTGCAAGAGCTTGCCCCTCTTTAAAAACATTTCAATCGATGATCAAATTTGTCTCCTTATCAATTCATGGTGTGagttgttgttattttcatgCTGCTTCAGGAGCGTGAATACACCAGGAGAGATTAGAGTCTCTCTTGGGAAATCAATCACACTCGAACAAGCCAGACAGCTGGGTCTCGCTAGCTGCATTGAAAGAATGCTTGCTTTCACCAACAACCTTAGACGATTGCGGGTGGACCAATACGAGTACGTCGCAATGAAGGTCATTGTCCTGCTGACATCTGATACGAGCGAGTTGAAAGAGCCAGAAAAGGTCCGAGCATCACAGGAGAAAGCATTGCAGGCATTGCAACAGTACACCATTGCCATGTATCCGGAAATGCCAGCCAAGTTTGGCGAACTGCTCCTTCGAATCCCAGATCTGCAGCGAACTTGTCAAGCAGGAAAGGAGCTGCTCAGTGCGAAACGAGCAGAAGGAGAGGGTAGTTCCTTCAACCTATTGATGGAACTGCTACGAGGGGACCACTAA
Protein Sequence: MSEQNGPPEGPGWWPPAQSWKSSSAPARPEAGRNVSVTTINVPPAHEMHDGKNVKYLGGRNGVTVSVVSGCATGNEPENDGADSDGEVSKIDFRGVNLRTKKKRDAPEGQESDASTITEAMLQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCSASPGPTHAPQEPKFPIKLEPEFRSSPGPPLGTPNETTLSNSQQHQQQHQQQHHQQQQHQHQHHQQQQQHQQQLNIDGLEQTQQSDLPLLVGKLLGGYNNATPSHSPVLHPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHSHTSHPHHQVAPQGSPLHLPVSHHYSATNSELSEGLSEDQEDCKIAPATAGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCSVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCSYTLPANLVGCTSGGLPGDKMLGGTCSPAPPGYEHYHSARHHSNHSHKLHVVPQLLQEIMDVEHLWHYNDNDRTTSAQSSSSSSKSEQPRPSSVGPQNTEHDPHPPSNANTNANSSQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVNTPGEIRVSLGKSITLEQARQLGLASCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIAMYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00174217;
90% Identity: iTF_00938835;
80% Identity: iTF_00175142;