Apln005707.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- CADEBC010000483.1:6226199-6242500[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.35 6.4e+03 -3.8 0.0 249 280 73 105 59 106 0.66 2 3 6e-79 1.1e-74 251.5 26.6 1 298 124 414 124 415 0.92 3 3 0.045 8.2e+02 -0.9 10.6 1 44 412 455 412 463 0.82
Sequence Information
- Coding Sequence
- ATGGGGCATCAATCTGAACTGGCTACACCTCACAATAGTGACGATGAAAGCGGAGATGCTTTTACAGATGGCGATTTTGGTGATTCAGATGATGAACATATCATAGAAagaaatgataatataaaagcATCGCATATTCCCATTAACGAAACCAAAAACGAGGATATTCACAAAATGAATGGCGCAACAAATGGTTTTTCTAAAAACGCAGATTTTGAAGAACAACCTAGACATATAGTAAGAAGCGTTAGTGAGGCTCATTCCAGTGATGTAGAGAATCCAAACATACACCTATCAGACCTTCGTAGGGATTCTCACGGTGACCAAAGTCCCTCAATAGTCGGCATTCTTGGAGATCAGCAAAATCATGCTGAGCAACGGTTGGCGGCGCGTCGCGCTGCTCGGGCAGAGGCGCGTGAAATCCGCATGCGCGAGTTAGAACGGCAGCAAAGAGAACAGGAGGACCATGCCGATAAAGCATATGACATGTATGCGGGTAAGACGGAGACGGTGGGGCGGCGGGACCGCACACGCCTGGCGGCGCTCAGCCCGGCCAGCTCCGTGCTCTCACCGCGGAGAAGCTCCGAGGACTCCGTCGATGACCTCTTCAGTATGAAGGATCTTAGGCACGAGTTAAAAGAAGTAGAGGAAAAATTCCGTAAGGCGATGATTCTGAATGCGCAGTTGGACAATGACAAGGCGGCGCTCGGTTACCAGCTAGAATTGCTTAAGGACAGGATAGAGGAGCTCCACGAGGAATATGCGCAGTTACAGCGCGAGCACAGGGAAAAGTGTTCGTCCCTGGAGCGTGTGAAGCGTGAGTTCGAGTCGGTGTCCCGCGAGCTGAGCGCGGCGCGTGATGCCGTCCGCGCGCGGGActgcgcggcggcggcggccggCTTCGCCTTCGTAGAGGCCGCCGCGCTGGACGCCGCGCCCAGCAGCGCCGGCCAGGCCGTCGGCGCCGTGCCGCCGCTCGCGCTCGTCAGCCACCACGCCGAGCAGCTGCTCAACGACGCCGGGGAGGGGACGCTAGATGTACGGTTGCAGAATTTGCTAAGTTCTAAACAATCACTGGAATCAGAAGTTCGCAAGCTGAAGTTGCAGTTGAACGAGGAACGCGCCGCCAGACAAAACGGTGTAGCGAACCATCACGACCAGGAGTATGAAAATGAGTTGGAGGCGGCGCGCAAGGGCCTGTCGGAGGCGAAGGGGCGCGCGGCTCGCGCCGAGGCGGAGGCGGCGCTCAACGCCGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCCCGCCTGCGCGCGCGACAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTACGCACGCACACCCACACCGTAC
- Protein Sequence
- MGHQSELATPHNSDDESGDAFTDGDFGDSDDEHIIERNDNIKASHIPINETKNEDIHKMNGATNGFSKNADFEEQPRHIVRSVSEAHSSDVENPNIHLSDLRRDSHGDQSPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTETVGRRDRTRLAALSPASSVLSPRRSSEDSVDDLFSMKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSLERVKREFESVSRELSAARDAVRARDCAAAAAGFAFVEAAALDAAPSSAGQAVGAVPPLALVSHHAEQLLNDAGEGTLDVRLQNLLSSKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELEAARKGLSEAKGRAARAEAEAALNAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRTHTHTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075459;
- 90% Identity
- iTF_00823915; iTF_01197744; iTF_00823059; iTF_01360636; iTF_00441512; iTF_01502108;
- 80% Identity
- -