Pful003617.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- lrrfip2
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000048.1:2679189-2697040[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.12 3.5e+03 -2.3 0.2 249 280 73 105 52 108 0.59 2 3 6.4e-78 1.9e-73 248.1 24.7 1 270 124 392 124 411 0.90 3 3 0.86 2.6e+04 -5.1 16.2 1 49 412 459 412 488 0.73
Sequence Information
- Coding Sequence
- ATGGGGCATCAATCTGAACTGGCTACACCTCACAATAGTGACGATGAAAGCGGAGATGCTTTTACAGATGGCGATTTTGGTGATTCAGATGATGAAAATGTTATAGAAAGAAATGAAAATACAAAAACATCGCATATTCCTATTAACGAAACCAAAAACGAGGATATTCACAAAATGAACGGAACAACAAATGGTTTTTCTAAAAACACAGATTTTGAAGAACAACCTAGGCATTTAGCTCGAAGCCTTAGTGAGGCTCATTCAAGTGATGTTGAGAATCAAAATATACATCTATCTGACCTTCGCAGGGATTCCCACGGTGACCAAAGCCCCTCGATAGTCGGAATTCTTGGAGATCAGCAGAATCACGCTGAACAGCGGTTGGCGGCTCGTCGCGCTGCTAGGGCGGAGGCGCGTGAAATCCGCATGCGCGAGTTAGAACGGCAACAGAGGGAACAAGAAGACCATGCCGATAAAGCATATGACATGTATGCGGGGAAAACCGAGACGGTGGGGCGGCGGGACCGCACACGCCTGGCGGCTCTCAGCCCCGCCAGCTCCGTGCACTCACCTCGGAGAAGCTCCGAGGACTCCGTCGACGATCTCTTCAGTGTGAAGGATCTTAGGCACGAGTTGAAAGAAGTAGAGGAGAAATTCCGCAAGGCGATGATCTTGAATGCGCAGTTGGACAACGACAAGGCGGCGCTTGGTTACCAGCTGGAACTGCTCAAGGACAGGATAGAGGAGCTCCACGAGGAATATGCACAGTTACAGCGGGAGCACAAGGAGAAGTGTTCGTCCCTGGAGCGAGTGAAGCGCGAGTTCGAGTCGGTGTCCCGCGAGCTGAGCGCGGCGCGGGACGCGGTCCGCGCGCGGGACTGCGCGGCCGCGGCGGCCGGCTTCGCCTTCGTGGAGGCGGCCGCGCTGGACGCTGTAGGGACCGCGGCGGGCGAGGGGGTGGGCGTCGTGCCGCCGCTCGCGCTCGTCAGCCACCACGCCGAGCAGCTGCTCAACGACGCCGGGGAGGGAACGCTGGATGTACGGTTGCAGAATTTGTTAAGTTCCAAACAATCACTGGAGTCAGAAGTTCGCAAGCTCAAGTTACAGTTGAACGAGGAACGCGCCGCCAGACAGAACGGTGTGGCCAACCATCACGACCAGGAGTATGAAAATGAATTGGAGTCAGCGCGCAAGGGTCAGTCGGAGGCGAAGGGTCGCGCCGCCCGCGCCGAGGCGGAGGCTGCACTGCACGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTGGCCCGCCTGCGCGCGCGGCAGGACCACCAGGACGAGCATGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGTTGCAGCGGGAGGCCCGTGAAGCATTAAACCGAGTGGAAGAACTGGAGACTGAGAACAGCCATCTGACGAAACGACTAGACAAACTCAAGAACGCAAAGTCAGCACTTCTCAAGGACCTGTGA
- Protein Sequence
- MGHQSELATPHNSDDESGDAFTDGDFGDSDDENVIERNENTKTSHIPINETKNEDIHKMNGTTNGFSKNTDFEEQPRHLARSLSEAHSSDVENQNIHLSDLRRDSHGDQSPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTETVGRRDRTRLAALSPASSVHSPRRSSEDSVDDLFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSLERVKREFESVSRELSAARDAVRARDCAAAAAGFAFVEAAALDAVGTAAGEGVGVVPPLALVSHHAEQLLNDAGEGTLDVRLQNLLSSKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELESARKGQSEAKGRAARAEAEAALHAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075459;
- 90% Identity
- iTF_00157222;
- 80% Identity
- -