Basic Information

Insect: Apotomis turbidana
Gene Symbol: -
Assembly: GCA_905147355.1
Location: LR990287.1:18683493-18688865[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.23 26 7.2 3.4 2 22 196 216 195 216 0.95

2 15 0.57 64 5.9 0.3 2 23 466 487 465 487 0.96

3 15 0.42 48 6.3 1.9 2 23 564 585 563 585 0.96

4 15 0.058 6.6 9.0 2.0 1 23 593 615 593 615 0.97

5 15 0.12 14 8.0 3.6 1 23 650 672 650 672 0.95

6 15 0.00065 0.073 15.2 5.4 1 23 680 702 680 702 0.99

7 15 0.057 6.5 9.1 1.8 1 23 786 808 786 808 0.99

8 15 2.5 2.8e+02 3.9 3.3 1 19 863 881 863 885 0.93

9 15 0.43 48 6.3 0.1 2 19 892 909 891 911 0.96

10 15 0.036 4 9.7 0.8 1 23 979 1001 979 1001 0.95

11 15 0.0079 0.89 11.8 2.3 1 23 1007 1029 1007 1029 0.95

12 15 0.0089 1 11.6 2.6 1 23 1119 1141 1119 1141 0.97

13 15 0.00012 0.013 17.5 1.2 1 23 1147 1169 1147 1169 0.99

14 15 0.81 91 5.4 2.0 1 23 1261 1283 1261 1283 0.96

15 15 0.0025 0.28 13.3 4.5 1 23 1294 1316 1294 1316 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.23	26	7.2	3.4	2	22	196	216	195	216	0.95
2	15	0.57	64	5.9	0.3	2	23	466	487	465	487	0.96
3	15	0.42	48	6.3	1.9	2	23	564	585	563	585	0.96
4	15	0.058	6.6	9.0	2.0	1	23	593	615	593	615	0.97
5	15	0.12	14	8.0	3.6	1	23	650	672	650	672	0.95
6	15	0.00065	0.073	15.2	5.4	1	23	680	702	680	702	0.99
7	15	0.057	6.5	9.1	1.8	1	23	786	808	786	808	0.99
8	15	2.5	2.8e+02	3.9	3.3	1	19	863	881	863	885	0.93
9	15	0.43	48	6.3	0.1	2	19	892	909	891	911	0.96
10	15	0.036	4	9.7	0.8	1	23	979	1001	979	1001	0.95
11	15	0.0079	0.89	11.8	2.3	1	23	1007	1029	1007	1029	0.95
12	15	0.0089	1	11.6	2.6	1	23	1119	1141	1119	1141	0.97
13	15	0.00012	0.013	17.5	1.2	1	23	1147	1169	1147	1169	0.99
14	15	0.81	91	5.4	2.0	1	23	1261	1283	1261	1283	0.96
15	15	0.0025	0.28	13.3	4.5	1	23	1294	1316	1294	1316	0.98

Sequence Information

Coding Sequence: ATGGGTCTCCAATACGCAGATATAGAAATGATCAGTTGTAACAGTGACAATGATACAAGTACCGAAGTCGTTGCTAAAAAAGACTCAGAATTGGCACAAGAACCACACAACCGACAATCGCCCAACAGCACGTCAGGGGAAGCGAAATCAAACAAACAGAGCAGAAAAGTACCTAGACCGATACCACAGCTAATACCTTTAAATACTTCGACCCCCAACCAAAATAAATCACCACCTGGAGAACCACCACTTAAAAAGTTCAAAGAAGATACAACTATAGACTCATCAGAGGTAAACATACTCGATAACATCGACAATTTACCAAACGATATCACTCTTATACCTGTCAATAACGGCACGCCAGTTACTACAAAAGAACCAGCAgtgaaaaagaaaaatgaatcATTTTTCGACAGGCTGAAGGAAAGGTTGTTGACGGCAACCGGGGAAGAGGGTACGTTGACATGTAAGAACTGCGGTTTTGAGAGCAAATGCTTATCGGAACATTCGGTACACGAAAAGAATTGTGCGGTTTCCGCTAACAGAGTTTTGGCAAATAATTCACATACAAGCCTTGGTTCTACGCGCTGCCAGAATTGTCGACATAGATGCAAATCGAGTGCCGATTTATATGTCCATATGCAAACTTGCGGTAAACAAAATAAAGTATCGGATGAACTGTCGAATGATAATGAAACTAAGAGTGAAGCCACTTCATCAACTCATGAAGCCGACGTAGCTAAAGACGAACCACATCCAATGGAGAATGTCGTTTTCGTATGGAACAATATAAACACAGATGCAACGAAGTTTGAAACGCCtttagatataaatataaatgatgATTCTACAATGCCTGAATCGAGTAAAAACTATGACTCTGAAGTAGTTGATGAGAACGAAGTCATGAATTTGTCACCGAGCCAAGCGGCTGGAAAGAAGGTATTCAAGTGCCCGCATTGCACATTTTGGGCATCGACCGCGTCTCGTTTCCATGTTCATATCGTCGGGCATTTGAACAAAAAACCATTCGAATGCTCTCTTTGCAAATATAAATCCAATTGGCGATGGGACATTACCAAacatattaaactaaaatcAGCAAGAGACCCTGAGCACAATGAAGCAAAGGTTTTGATGACGGATGAAACCGGGAGAAGGAACTATAGCAAATATAATAAGTTCTTTGCGATTCCAGTCATCAATGAGTATGGAGAAACAGAGTTTGAGTACTTGGATCCGAATCTAGCGAATGGTAGCGTGGAGATAGACGAATCTTATGACACGAATGACACCATCAACGCGACGCTTGAAATGCCTCTTAACTTGCAAACTCAACATGGCGAGACAAtggatgacaaaaatgaagacAAGAAACCTAAGAAGACGTTATGGAAATGCAAAAAATGCAACTACAAGGACCCCTCGAAGGAAGCATTATTGGTGCATGTTCGCGAGCACTCCAAGCCGGAGGATGGACAGGAAGACAAGCCCACCTTCGGCAAGAAGCCCGAGAACACGCCCGACCCCGCCGACCTAGCGTACCGCTGCGGACACTGCAATCAGCTGTCTAACTGGAAGCATGTCATACAGAGACACTGCCGCTTGAAGCATGACGGTGTCATCAAGGTTATCACCACGGTCAAACCGAAACAGGATGTTACGGCGTTGCTGAACGAGCTGGGTGATACTTGCACTAAATGCCCGTTCAAAGCAGTCGACAAAAAACAACTACTAAGCCACTTGCACCAGCACCAGCCGTCACCCCAATCTATATTCAAATGCTACTTCTGTCCGTACTTCGTGAAAACTGAGCATGACTTAATGCAACATCTCGCTTTACACGGCGTTACCGACCCTGAGGAGTACATCTCTAAAGCAATGGGCTGCAAGTCACCTTTGCCCGAACAACAGGGACCTTCTGGCAGCTCCACCTCCACGAAGCGACATAAGTGCACCGAGTGTCCGTACGAAACCAACAGCAAGTCACAGTTTATGTACCATGAGCAATTCCATCGGCTCCCAGCCGACACTCCCTACAAATGCCAGGAATGCAACTACAGCGTGTCCAAGAGGCATCTACTTCATCAGCACATGAGGGTTCACGGGATCATGCCAAAGAAAACGGAAATGGAGTTAGAAATGGAAGCCTCTACATCCTCTTGTAAAGCGGACAGCAAAATTGATATTCCCATAGATTTAAACGAGATCCCATTCGTATGGGTTTCCGCTAAGAACGAATTCCACAAAATGTACAAATGCCGTTACTGTTCGTATGTAAATTCTCAGAAGTGTAAAATACCAAATCATGAAAAAATTCACTGCATTGTCTTTGAAAACAGTGAAATTACAATATATAAGTGCTTAGAATGCAAGTTTACATGCGACAATGCAGGTAGATTGGCTGAACATTCGAGGACACACGGCGAAATATACGGGCGCATCTACTGCCCGGTCGAATCTGATGTTCCCGATGAGGAGCAAATCGCCAAACTACGCAAGGTCATAGAAATAGAAAAACTGAACAACTCTGAGAGCCATAGAGATGAAACGACTCAAAAGGATGGTGAAGACGTGAAAATACTATACTTCTGTCATAAATGTCCAGCTAGATTTTTCTTTGATAGTGAATTGAGGATTCATGATAAATTCCACGATCTGTTGTTTGAGAACAAGTGTAAGTATTGTGAGTTTTCAGTTCCTCAAGAAACTGAATTGAATGCTCACTTTGTATGCCATTCCGATGAATATGCGACTGAAACTAAAATGCTTAAGTTCAAGCATAGATCTCATCCCGCTCACAAAGACCCGAAAGTGGAAATCGTACACTGCCCAGCCACTTCAGAAGTTAACTGGATAGTTTCGACCTCATCGAAAAATTATGGAATCGCAGATTCTTCGAAAaaatgtactgaaaataaaGCGCCTAGGCAGTATTTTTGCAAAGAATGCCCCGCTAAATTCTTCAAAACTTCAGCTTTGAGTTATCACATGGGATTACATGGAGGCGACGGCGAGCATAAGTGCAAAAAGTGTAGTTACACTGTTAAAAACTTAGGAAATTTGGCCAAACATGAGTCACTACACGAGAACGAAGGTAAAAACACCACATGTGATTATGAATCTGGAGAAGACAACGATTATAAAAACATTCCATTATCCGGCACAGATTTATTCCAAAGAAAAACTGAAGCGCAGAAAAGAGTTGTAATAGACAAAAATAAGTTAGTTAAGCCAAACGACCATTTCCCACCAGTTCTCCAGGCTGATCCACAGTTTGGGTATCTCATGCACGGTAATCCAGAGTTTATCTAtcctacatatttaaaaaatgggcGACAAAAAGAGAAAAGGTACAAGTGCCACAAGTGCCCATCGGCGTTTGAAAAAAGAGAACAATACAAAATACATCTATCCTTGCATGGTTCCAAGCAGAGATATAAATGTGAAGTCTGTGATTACTCTGTAAAATATTACGCAAACTACGTGCAACACATGAGGAAACATCAAATGAATGACGAAGCTGTGGCTGAAAGGAAGAAAAGTAACGAGGAAACAACTGAAGCAGAAAATGAGATTCAAGAAGATACACCattaaaagaaaacattaaattagCTATTAAGACAATGCCGAAAGGAGCAGCGAGGCCAAAAAGCGATTTCCAGCAGTTTTCTGTTAGTGACCAACAGACACTGCGGCTACTGCAACTGAGACGGTCAATAAATAGTgccgaaaatgaaaaaaatccaGAGCCTACTCCTCCGAAGGAACGCAAGCTGCACATGTGCTTGTTATGCCCTTACTCGAACCAGCGACAAGATGCTTTAACGAACCATTATAAACGGCACGATGAAAACCTCAGTGCCAGTAATGGGACTCATAAATGCCCTCATTGTGACTTAGTTGTCGTACAATCACACTTCCTGCGAGATCATTTGAAGACTCATTTTAATTATCAAAAGCATTTGGCCCCTGAATGCTTTGCAGCTAGTGAATGTATGtcatttattgtaaaacaacTCGATGATGAggataatattaaaaacgaagACCAGGCTGAAATAAAAGAAGATGACGCTgatgaaaatattaaagttgAAACTATTGATGTTAGTAGTGAAAGTAGCGACATGAAAATCGACGAATCAGgcaaatatattgtaaaaaaaggTCCGAAATTCAATTTTAAGATCGCGGTAAAAGAAGACACAGCGACTGAATTCACAATTTCGTTGGATGAAAAAATAACTTTCAAGTCTTTCGACTCGAACGAAAATAAAGTTTACGTTAAACTCAAAACAGGAGAGCTTATGGTAGAATAA
Protein Sequence: MGLQYADIEMISCNSDNDTSTEVVAKKDSELAQEPHNRQSPNSTSGEAKSNKQSRKVPRPIPQLIPLNTSTPNQNKSPPGEPPLKKFKEDTTIDSSEVNILDNIDNLPNDITLIPVNNGTPVTTKEPAVKKKNESFFDRLKERLLTATGEEGTLTCKNCGFESKCLSEHSVHEKNCAVSANRVLANNSHTSLGSTRCQNCRHRCKSSADLYVHMQTCGKQNKVSDELSNDNETKSEATSSTHEADVAKDEPHPMENVVFVWNNINTDATKFETPLDININDDSTMPESSKNYDSEVVDENEVMNLSPSQAAGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFFAIPVINEYGETEFEYLDPNLANGSVEIDESYDTNDTINATLEMPLNLQTQHGETMDDKNEDKKPKKTLWKCKKCNYKDPSKEALLVHVREHSKPEDGQEDKPTFGKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKQDVTALLNELGDTCTKCPFKAVDKKQLLSHLHQHQPSPQSIFKCYFCPYFVKTEHDLMQHLALHGVTDPEEYISKAMGCKSPLPEQQGPSGSSTSTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIMPKKTEMELEMEASTSSCKADSKIDIPIDLNEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSEITIYKCLECKFTCDNAGRLAEHSRTHGEIYGRIYCPVESDVPDEEQIAKLRKVIEIEKLNNSESHRDETTQKDGEDVKILYFCHKCPARFFFDSELRIHDKFHDLLFENKCKYCEFSVPQETELNAHFVCHSDEYATETKMLKFKHRSHPAHKDPKVEIVHCPATSEVNWIVSTSSKNYGIADSSKKCTENKAPRQYFCKECPAKFFKTSALSYHMGLHGGDGEHKCKKCSYTVKNLGNLAKHESLHENEGKNTTCDYESGEDNDYKNIPLSGTDLFQRKTEAQKRVVIDKNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAVAERKKSNEETTEAENEIQEDTPLKENIKLAIKTMPKGAARPKSDFQQFSVSDQQTLRLLQLRRSINSAENEKNPEPTPPKERKLHMCLLCPYSNQRQDALTNHYKRHDENLSASNGTHKCPHCDLVVVQSHFLRDHLKTHFNYQKHLAPECFAASECMSFIVKQLDDEDNIKNEDQAEIKEDDADENIKVETIDVSSESSDMKIDESGKYIVKKGPKFNFKIAVKEDTATEFTISLDEKITFKSFDSNENKVYVKLKTGELMVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01134374; iTF_00411010; iTF_00409859; iTF_00413114; iTF_00412095; iTF_01073166; iTF_00290279; iTF_00656761; iTF_00654917; iTF_00657873; iTF_00681271;
90% Identity: -
80% Identity: -