Basic Information

Insect: Pammene aurita
Gene Symbol: -
Assembly: GCA_947086415.1
Location: OX352293.1:29431709-29436700[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.2 22 7.1 3.4 2 22 190 210 189 210 0.95

2 15 0.49 54 5.9 0.3 2 23 465 486 464 486 0.96

3 15 0.031 3.4 9.7 2.9 2 23 563 584 562 584 0.96

4 15 0.065 7.2 8.7 0.5 1 23 592 614 592 614 0.97

5 15 0.26 29 6.8 2.8 1 23 649 671 649 671 0.95

6 15 0.0019 0.21 13.5 5.2 1 23 679 701 679 701 0.99

7 15 0.014 1.6 10.8 1.9 1 23 785 807 785 807 0.99

8 15 2.7 3e+02 3.6 1.6 3 19 864 880 862 884 0.91

9 15 1.2 1.3e+02 4.7 0.4 2 23 891 912 890 912 0.91

10 15 0.099 11 8.1 1.0 1 23 978 1000 978 1000 0.93

11 15 0.0068 0.76 11.8 2.3 1 23 1006 1028 1006 1028 0.95

12 15 0.0077 0.85 11.6 2.6 1 23 1118 1140 1118 1140 0.97

13 15 0.0001 0.011 17.5 1.2 1 23 1146 1168 1146 1168 0.99

14 15 0.84 93 5.2 2.2 1 23 1260 1282 1260 1282 0.96

15 15 0.0021 0.23 13.4 4.5 1 23 1293 1315 1293 1315 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.2	22	7.1	3.4	2	22	190	210	189	210	0.95
2	15	0.49	54	5.9	0.3	2	23	465	486	464	486	0.96
3	15	0.031	3.4	9.7	2.9	2	23	563	584	562	584	0.96
4	15	0.065	7.2	8.7	0.5	1	23	592	614	592	614	0.97
5	15	0.26	29	6.8	2.8	1	23	649	671	649	671	0.95
6	15	0.0019	0.21	13.5	5.2	1	23	679	701	679	701	0.99
7	15	0.014	1.6	10.8	1.9	1	23	785	807	785	807	0.99
8	15	2.7	3e+02	3.6	1.6	3	19	864	880	862	884	0.91
9	15	1.2	1.3e+02	4.7	0.4	2	23	891	912	890	912	0.91
10	15	0.099	11	8.1	1.0	1	23	978	1000	978	1000	0.93
11	15	0.0068	0.76	11.8	2.3	1	23	1006	1028	1006	1028	0.95
12	15	0.0077	0.85	11.6	2.6	1	23	1118	1140	1118	1140	0.97
13	15	0.0001	0.011	17.5	1.2	1	23	1146	1168	1146	1168	0.99
14	15	0.84	93	5.2	2.2	1	23	1260	1282	1260	1282	0.96
15	15	0.0021	0.23	13.4	4.5	1	23	1293	1315	1293	1315	0.98

Sequence Information

Coding Sequence: ATGGGACTACAATACGCAGATATAGAAATGGTTAGCTGTACCAGTGACAACGAAACGAGCACTGAAACTGTTGCCAAAAAAGACAACGAATTGGCACAAGAATCACACAATCGTCAATCGCCCAACAGTACACCGGGAGAAGGGAAAACAAATAGACAAAGCAGAAAAGTACCCCGACCGATACCACAACTGATACCCCTGAACACGTCGACGCCCAATCAAAATAAATCTCCGCCAGGAGAGCCACCGCTCAAAAAGTTTAAAGAAGATCCAAGTAGAGACGTCAATACAGTCGAAAATTTACCAGCTGATATCACAATTACACCTGTCACCAACGGTACACCTCCTACTACTAAAGAACCCGCGGTGAAGAAGAAGAACGAATCCTTCTTCGACAGACTTAAAGAAAGGTTGTTAACGGCAACTGGAGAGGAAGGAACGTTGACATGCAAAAACTGCGGTTTCGAAAGCAAATGCCTGTCAGAACATTCCGTACACGAAAAGAATTGCACAGTATCCGCAAACAGAGTTTTGGCAAATAACACACACACGAGCCTTGGGTCTACGCGCTGCCAGAATTGTCGGCATAGATGTAAATCAAGTGCCGATTTATATGTTCACATGCAAACATGCGGTAAAAAGGAGATAGTGGAAAATGAACAATCAAATGACAGTGAAAACAAAAATGAAACCGCTTCCTCAGCCCTTGAAACAGACATTGTCAAAGATGTACCACATCCTATGGAGAATGTCGTTTTCGTATGGAATAATATCAATACTGATAACGCAAAATTTGAGACTCCGCTGGGTATAAATATAAATGATGATTCTACAATGCCCGAATTAAGTAAAAACTATGACTCAGAAATAGTTGATGAAAATGAAGTCATGAATTTGTCACCGAGCCAAGCTGCTGGGAAAAAAGTGTTCAAATGTCCGCACTGCACGTTCTGGGCGTCGACAGCATCACGGTTCCACGTTCACATAGTCGGGCATTTAAACAAAAAACCTTTCGAATGCTCGCTTTGCAAATATAAATCTAACTGGCGATGGGACATCACCAAACACATAAAACTAAAATCAGCAAGAGACCCCGAACACAATGATGCAAAGGTTTTGATGACTGATGAGACTGGACGAAGGAACTACAGTAAATACAACAAGTTCTTAGCAGCACCGATCATAAACGAATATGGAGAAACCGAGTTTGACTACATAGATCCAAACGCATTGGTAAACGGTAGCTTGGAGCTCGATGAATCATTCAACGACACGAATGATAATATCAACACAACACTTGAAATGCAACCTCTTAACTTGCAAACTGGACAACAAAGTATCGATACAATGGATAACAAGAGCGAAGATCAGAAACCTAAGAAAACAATGTGGAAATGCAAAAAATGTAATTACAAGGATCCATCGAAGGAAGCGCTACTAGTACACGTCCGCGAGCACTCGAAGCCCGAAGATGGGCACGAGGACAACAAGGCCTTCAACAAGAAACCCGACAACACTCCGGACCCGGCCGACCTGGCCTACCGCTGCGGCCACTGCAACCAGCTGTCCAACTGGAAGCACGTCATACAGAGACACTGTCGTTTGAAGCATGATGGGGTCATCAAAGTAATTACGACGGTCAAACCGAAATCTGATGCTGCCTCGCTGTTGAACGAAATGAACGACACTTGCACCAAATGTCCGTTCAGAGCAACAGACAGGAAACAACTTCAACATCACCTGCAGCAGCACCTGCCCTCGCCCCAGTCAATATTCAAGTGCTATTTCTGTCCTTACTTCGTGAAAACTGAGAACGACCTGGTGCAACATCTAGCTTTACACGGTGTCACGGACCCAGAAGATTACATCTCCAAAGCAATGGGGTGCAAGTCACCACTCCCAGAGCATCCTGGACATTCGAGCGCATCTACCTCAACAAAACGACACAAGTGCGTGGAGTGCCCCTACGAGACCAACAGCAAATCTCAGTTTATGTACCACGAGCAGTTCCACCGACTTCCTGCCGATACTCCATACAAATGCCAGGAATGCAACTACAGCGTTTCCAAGAGACACCTCCTCCACCAGCACTTGAGAGTTCACGGGATTTTCCCCAAGAAAACTGAAATGGAATTAGAAATGGAAGCGTCCACGTCCTCGTCTAAGATGGACAGCAAAATGGAAATTCCTATCGATTTAACCGAAATTCCGTTTGTATGGGTTTCGGCTAAAAACGAATTCCACAAAATGTACAAATGCCGCTACTGTTCGTATGTAAACTCACAAAAGTGTAAAATACCAAATCATGAGAAAATTCATTGTATCGTCTTTGAAAACAGTGAAATCACTATTTACAAATGCTTGGAATGTAAATTCACATGCGATAATGCCGGAAAGTTGGCCGAGCATTCGAGGACGCACGGAGAAATTTACGGACGCATTTACTGCCCAGTCGAATCCGATGTGCCCCATGAGGAACAGATAGCCAAACTACGCAAGGTCATAGAAACTGAGAAACTTAACAACCCGGAGAGCCCCAGGGACGAGATGGTTTTGAAAGACAATGAGGAGCTTAAGATACTGCTCTTTTGTCATAAATGCCCGGCTAGATTTTTCGTTGATAGTGATCTGAGGATCCATGACAAATTCCATGATTTATTATTTGCGAATAAATGCAAATATTGTGAGTTTTCAGTGCCCCAGGAAACTGAATTAGACGCGCATGCGGTCCATCATTCTGATGAGTATGCAACGGAAACTAAAATGCTCAAGTTTAAGCATCGTTGTCACCCCGCGCACAAGGAGCCGAAATTGGAACTTGTACACTGCCCGCTCACTTCAGAAGTTAATTGGATAGTTTCGCACCCGATGACTAACTTCGATATTGTAGATTCTTCGAAAAAGTGCAATGAGAATAGAGTGCCTAAGCAATATTATTGCAAGGAATGTCCGGCCAAATTCTTCAAAACTTCGGCGTTAAGTTATCACACGGGATTACACGGAGGTGATGGCGACCATAAGTGCAAAAAATGTAGTTACACTGTCAAAAACTTAGGGAACTTGGCAAAACACGAATCGTTACACGAGAATGAAGGCAAAGCCAACACATGTGATTATGAATCCGGAGAAGACAACGATTACAAAAACATTCCATTATCTGGTACAGATCTATTTCAACGGAAAACTGAAGCGCAGAAAAGAGTTGTTAAAGACAACAACAAGTTAGTAAAACCCAACGACCATTTCCCACCTGTCCTACAGGCAGATCCTCAATTCGGGTACCTAATGCACGGGAATCCAGAATTTATCTATCCTACATATATGAAAAATGGTCGACAAAAAGAGAAAAGATACAAGTGTCACAAATGTCCATCCGCATTTGAGAAAAGAGAACAATATAAAATACATTTATCACTGCACGGATCCAAACAGAGATACAAATGCGAAGTCTGTGATTATTCTGTAAAATATTATGCCAACTACGTGCAGCACATGAGGAAACATCAAATGAATGACGAAGCCCAGGCAGAAAGAAGGAAGACTAACGAAGAGACTAATGAGGCAGAACAAGAGACACAGGAAGATACACCTTCGAAAGGAAATATCAAGCTAGCGATTAAAACAATGCCAAAGGGGCCCACAAGGCCAAAAAGTGATTTTCAGCAGTTTTCTGTCAGTGATCAACAGACACTCCGCCTGCTACAACTGAGACGGTCCATAAATACTGCTGAAAAAGAAAAGCAACTAGACCCCACTCCCACGAAGGAACGCAAGTTACACATGTGTTTGTTATGCCCATACACAAACCAACGCCAAGACGCGTTAACAAATCACTACAAGCGACATGAAGATAACCTAAACGCCGCCAATGGCATTCATAAATGTCCTCATTGTGACCTAGTCGTAGTTCAATCACACTTTTTGCGGGAACATTTAAAGACTCATTTTAATTATCAAAAGCATTTAACCCCCGAATGCTATGCAGCAAGTGAAGGCGTGACTTTCGTTATAAAGCAAATTGATGATGAAGAAGACACAAAAGACGAAGACAATAGTGAAAATAAAAATAAAGATATATCCGATCATGAAGTCAAAGTCGAAAAGGATGATCATAATGAAAGCGGTGACCAGAAGACAGACGAGAACAAAACATATGATCTGAAAGATATATTTAAAAATGGACAGAAAAATGGACCAAAATTAAATTTGAAAATTTCGGTAAAAGAAGAAACTTCGTCTGATCTAGTAATTACGTTAGATGAAAAAATTACTTTCGACTCTAATGATAATAAGATATTTGTTAAGCTCAAAACAGGAGAGCTTGTTGTAGATTAA
Protein Sequence: MGLQYADIEMVSCTSDNETSTETVAKKDNELAQESHNRQSPNSTPGEGKTNRQSRKVPRPIPQLIPLNTSTPNQNKSPPGEPPLKKFKEDPSRDVNTVENLPADITITPVTNGTPPTTKEPAVKKKNESFFDRLKERLLTATGEEGTLTCKNCGFESKCLSEHSVHEKNCTVSANRVLANNTHTSLGSTRCQNCRHRCKSSADLYVHMQTCGKKEIVENEQSNDSENKNETASSALETDIVKDVPHPMENVVFVWNNINTDNAKFETPLGININDDSTMPELSKNYDSEIVDENEVMNLSPSQAAGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAAPIINEYGETEFDYIDPNALVNGSLELDESFNDTNDNINTTLEMQPLNLQTGQQSIDTMDNKSEDQKPKKTMWKCKKCNYKDPSKEALLVHVREHSKPEDGHEDNKAFNKKPDNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKSDAASLLNEMNDTCTKCPFRATDRKQLQHHLQQHLPSPQSIFKCYFCPYFVKTENDLVQHLALHGVTDPEDYISKAMGCKSPLPEHPGHSSASTSTKRHKCVECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHLRVHGIFPKKTEMELEMEASTSSSKMDSKMEIPIDLTEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSEITIYKCLECKFTCDNAGKLAEHSRTHGEIYGRIYCPVESDVPHEEQIAKLRKVIETEKLNNPESPRDEMVLKDNEELKILLFCHKCPARFFVDSDLRIHDKFHDLLFANKCKYCEFSVPQETELDAHAVHHSDEYATETKMLKFKHRCHPAHKEPKLELVHCPLTSEVNWIVSHPMTNFDIVDSSKKCNENRVPKQYYCKECPAKFFKTSALSYHTGLHGGDGDHKCKKCSYTVKNLGNLAKHESLHENEGKANTCDYESGEDNDYKNIPLSGTDLFQRKTEAQKRVVKDNNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYMKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAQAERRKTNEETNEAEQETQEDTPSKGNIKLAIKTMPKGPTRPKSDFQQFSVSDQQTLRLLQLRRSINTAEKEKQLDPTPTKERKLHMCLLCPYTNQRQDALTNHYKRHEDNLNAANGIHKCPHCDLVVVQSHFLREHLKTHFNYQKHLTPECYAASEGVTFVIKQIDDEEDTKDEDNSENKNKDISDHEVKVEKDDHNESGDQKTDENKTYDLKDIFKNGQKNGPKLNLKISVKEETSSDLVITLDEKITFDSNDNKIFVKLKTGELVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00150040;
90% Identity: iTF_00413114; iTF_00412095; iTF_00411010; iTF_00409859;
80% Identity: -