Epro006471.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudemis profundana
Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000050.1:1808742-1818140[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.08 6.4 8.7 4.1 1 23 83 106 83 106 0.97
2 18 0.003 0.24 13.2 1.0 2 23 218 239 217 239 0.97
3 18 3.6 2.9e+02 3.5 1.4 1 23 245 267 245 268 0.94
4 18 0.3 24 6.9 3.4 2 22 512 532 511 532 0.95
5 18 0.48 39 6.2 0.2 2 23 788 809 787 809 0.96
6 18 0.082 6.6 8.6 0.6 2 23 886 907 885 907 0.97
7 18 0.076 6.1 8.7 2.0 1 23 915 937 915 937 0.97
8 18 0.16 13 7.7 3.6 1 23 972 994 972 994 0.95
9 18 0.00085 0.068 14.9 5.4 1 23 1002 1024 1002 1024 0.99
10 18 0.075 6.1 8.8 1.8 1 23 1107 1129 1107 1129 0.99
11 18 7.8 6.3e+02 2.4 2.4 1 19 1183 1201 1183 1205 0.90
12 18 0.24 19 7.2 0.1 2 20 1212 1230 1211 1231 0.96
13 18 0.34 27 6.7 1.0 1 23 1299 1321 1299 1321 0.92
14 18 0.01 0.83 11.5 2.3 1 23 1327 1349 1327 1349 0.95
15 18 0.012 0.94 11.3 2.6 1 23 1439 1461 1439 1461 0.97
16 18 0.00015 0.012 17.2 1.2 1 23 1467 1489 1467 1489 0.99
17 18 1.3 1e+02 4.9 2.2 1 23 1581 1603 1581 1603 0.96
18 18 0.0033 0.27 13.0 4.5 1 23 1614 1636 1614 1636 0.98

Sequence Information

Coding Sequence
ATGCTCCAGCAAATGTCCTCGCCGCCGAGCGTTCACGTCGGCGAGGTCGCATCCCTAGTGCGGCTCGAAGGCCGCGTGTGCGGCGACGCGTCTTCGGAGGCCTCCTCGGACGCCGCCGAAGATTGTGAATTGCCGCAGTGTAAGATAAGAAGAAATTACAATTGCACCAAGTGCACGTTCTACACGCAGAACCCGCGGGTTTATTTAGTGCATACGAGAGACGTTCACTTTgaaaagttcaaaatatatgACTGCCCTCACTGCGTCTACGCCTCGAGACACCATCAGAAACTCGTAAGACACATAAAGATGGTACATGCGGCGCCGTCGCCGGTGGTCAAAACGGATTTGGAGCCACCGCCGGCGCCCGTGTCTTCGAGCACAATAACAGAACCGGAGGAGCGAATTGAAGACTTGCTCGAAGAAGTTGAGGACACGGAAGACGTTCAAATAGAATTGGAGGATGGTATCGAAGAGTCGATGGATCGCTCCGCAGACATGGAGGTCGATGTGGATAGACCTGCCGCCGAGGAATCTTCGGAATTACCAAAGGACAAGACGAAATTTTTTTCTTGCACAAAATGTAACTATGTCACACACATCCGTGCAAGATTCACCAAACATGTAAAATATCACTCCATGCCGATGATTAAATGTACGATGTGCGATTTCCGCACCCCTTACAAATGGAATTTGGATCGACATATGAAGAATCACGGAGGGACTGGGAGTTTCAATTGTTCCATGTGCAACTTCACCGCCGACATCAAGCAGAGCCTGACCGTGCACGAGATGAATCACCACACGCCGCCCGTGGGGCAATCGGTCGCGAGTCGCCGACGCAACCGGGTGGGTGCCAGCGACATCGCTCTCGCCGACGCGGCGCTCGCACTCGTCGCCAAGGAGGAAGAGGGGAGCGGCGATTCGCGCTCTTCGCACGCATCGGAAATGGGTCTCCAATACGCAGATATAGAAATGATAAGTTGTGCCAGTGATAATGATACGAGTACTGAAACCGTTGCCAAAAAAGACTCCGAATTGGCACAAGAGAGACACAATCAACAATCGCCCAACAGCACATCGGGAGAAACGAAATCAAATAAGCAGAGCAGAAAAATACCCAGACCTATACCACAATTGATACCCTTGAATACTTCGACGCCTAATCAAAATAAGTCACCACCAGGAGAGCCACCTCTCAAAAAGTTCAAAGAAGATCCAAGCATAGAATCGTCAGAGATAAACACAGTCGATAATTTAGACAATTTACCAAATGATATCACACTTATACCTATCCATAACGGTACACCAGTTACAGCAAAAGAACCAACAgtgaaaaagaaaaatgaatCCTTTTTCGACAGGTTGAAAGAGAGGTTATTGACAGCAACCGGTGAAGAGGGAACGTTGACATGTAAGAACTGCGGTTTTGAAAGCAAATGTTTATCGGAACATTCCGTCCATGAAAAGAATTGTACCGTTTCCGCTAACAGAGTTTTGGCAAATAATACACATACAAGTCTTGGCTCTACGCGCTGCCAGAATTGTCGACACAGATGCAAATCGAGCGCCGATTTATATGTCCATATGCAGACGTGCGGTAAGCAAGAGAAAGTAGAAAATGAACAATCAAATGATAATGGAAACAAAAGCGAAGCCACCTCATCGACCCATGAAACGGACGTCGCTAAGGATGAGCCACATCCAATGGAGAATGTCGTTTTCGTATGGAATAATATAAACACCGATTCAACGAAGTTTGAAACACCATTAGATATAAATATCAATGATGACTCTACGATGCCTGAATCGAGTAAAAACTATGACTCTGAAGTGGTTGATGAGAATGAAGTCATGAACTTGTCACCGAGTCAAGCTGCTGGGAAAAAGGTGTTTAAGTGCCCACATTGCACGTTTTGGGCTTCAACCGCGTCACGTTTCCACGTTCATATCGTGGGGCATTTGAACAAAAAGCCCTTCGAATGCTCTCTATGCAAATATAAATCCAATTGGCGATGGGATATCACCAAACATATTAAACTAAAATCAGCAAGAGACCCTGAACATAATGATGCAAAGGTTTTGATGACTGATGAAACTGGAAGAAGAAACTACAGTAAATATAATAAGTTCTTTGCGATTCCAGTCCTAAATGAATATGGAGAAACCGAATTTGAATATATAGATCCAAATTTAGCGAACAGTAGCATGGAGATTGATGAACCATTCAATGAAACGAATGACAATATCAACACGACGCTTGAAATGCAGCCTCTTAATTTGCAAACTCAACATGGAGAGCATAGATTTGAGACAATGGACGACAAAAATGAAGACAAGAAACCTAAGAAGACGATGTGGAAATGCAAGAAATGCAACTACAAGGACCCATCGAAGGAAGCGCTGCTGGCGCACGTTCGCGAGCATTCCAAGCCTGAAGACGGGCACGAGGACAAACCCCAAGCCTTCACTAAGAAGCCCGAGAACACACCTGACCCGGCTGACTTGGCGTATCGCTGCGGACACTGCAATCAGTTGTCCAATTGGAAACATGTCATACAGAGACACTGCCGCTTGAAGCATGACGGGGTCATCAAAGTTATCACTACGGTCAAACCTAAACCTGATGCTTCATTGTTGAACGAAATGAACGACACCTGCACTAAATGCCCATTCAAAGCCATCGACAGAAAACAGCTCCAGGGCCACATGCAGCAGCACCAGCCTTCGCCCCAGTCCATATTCAAATGCTACTTCTGTCCATACTTTGTGAAAACTGAGCACGACTTAATGCAACATCTCGCCTTACACGGCGTGACCGATCCCGAAGACTACATCTCTAAAGCGATGGGCTGCAAGTCGCCTCTACCGGAACACCAAGGACATTCGGGCAGCTCGAACTCCACCAAGCGCCACAAGTGCACGGAGTGTCCCTACGAAACCAACAGCAAGTCCCAGTTCATGTACCACGAGCAATTCCACCGACTCCCGGCTGAtactccatacaaatgtcaggAATGCAACTACAGCGTCTCCAAGAGACACTTGCTCCACCAGCATATGAGAGTGCACGGGATCATGACAAAGAAAACTGAAATGGAATTGGAAATGGAAGCTGCCTCGTCTTCGAAGATGGACAGCAAAATTGATATCTCTATAGATTTAAATGAAATCCCGTTCGTATGGGTGTCGGCCAAAAACGAATTCCACAAAATGTACAAATGCCGGTATTGTTCGTATGTAAATTCACAGAAGTGCAAAATACCGAATCATGAAAAAATTCATTGCATTGTTTTTGAAAACAGTGAAATCACTATTTATAAATGCTTGGAATGCAAGTTTACATGCGACAATGCCGGAAGGTTGGCTGAACATTCGAGAACGCACGGCGAAATTTACGGACGGATATACTGTCCGGTCGAATCGGACATTCCCGATGAAGAACAGATTGCGAAATTACGCAAAGTCATAGAAGCCGAAAAACTAAACTCTGAGAGCCCCAGAGAAGACATGAGTTCAAAAGATGGCgaagaaattaaaatattattcttcTGTCATAAATGTCCAGCCAGATTTTTCATTGATAGTGATCTAAGGGTCCACGATAAATTCCACGATCTGTTGTTTGAAAACAAATGCAAGTATTGTGAATTTTCAGTTCCTCAAGAAACTGAATTGAATGCTCACTTAGTGTGCCATTCTGATGAATATGCGACGGAAACAAAAATGCTCAAGTTTAAGCACAGATCTCACCCTGCGCATAAAGATCCGAAAGTGGAGCTGGTTCACTGCCCGGCCACCTCGGATGTTAATTGGATAGTTTCCACCCCATCGAAAAATTATGAAATCGTGGATTCTTCGAAAAAATGTACTGAGAATAAAGtacctaaacaatatttttgcaAGGAATGTCCTGCTAAATTCTTTAAAACTTCGGCGTTAAGTTATCATACTGGATTACATGGAGGTGACGGCGAACACAAGtgtaaaaaatgtagttatacTGTCAAAAACCTAGGAAATTTGGCTAAGCACGAATCACTGCATGAAAACGAGGGTAAAACCACCACATGTGATTATGAATCTGGAGAAGACAACGATTACAAAAACATTCCATTATCAGGTACAGATCTATTCCAAAGAAAAACTGAAGCGCAAAAAAGAGTTGTAACAGACAAAAACAAGTTAGTTAAGCCCAATGATCATTTCCCACCCGTACTTCAGGCGGATCCACAATTTGGATACCTGATGCACGGTAATCCAGAGTTTATCTAtcctacatatttaaaaaatggcCGACAAAAAGAGAAAAGATACAAGTGCCACAAGTGCCCATCGGCATTTGAGAAAAGAGAACAATACAAAATACATTTATCTTTGCACGGGTCCAAACAGAGATACAAATGCGAAGTTTGTGATTATTCCGTGAAATATTACGCCAACTACGTACAGCACATGAGAAAACATCAAATGAATGATGAAGCTGTGGCAGAGAGGAAGAAAAGCAACGAAGAAACAAACGAAGCTGAAAATGAGACGCAAGAAGATAAACTAGCAAAAGGAAATATCAAACTGGCGATTAAGACAATGCCAAAAGGACCAACGAGGCCTAAAAGCGATTTTCAGCAGTTTTCCGTTAGTGATCAACAGACCCTGCGATTATTGCAAATGAGACGATCTATTAATAATGCtgagaatgaaaaaaatccAGAACCTACTCCTACAAAGGAACGCAAACTACATATGTGCTTGTTATGTCCTTACACGAATCAGCGCCAAGATGCTTTAACGAATCATTACAAACGGCACGACGAAAACATCAATGCCAACAATGTGGTGCATAAATGTCCTCATTGTGACCTAGTTGTGGTACAATCACATTTCCTACGGGATCATTTGAAAACTCATTTTAACTATCAAAAGCATTTGGTGCCTGAATGCTTTGCAGCTAGTGAAAACGTAACATTTGTCGTAAAACAACTCGATGatgaaaatgttaaaaaagaagATAACGCTGAAATAAAAATTGAAGACAATTCTGATAAAGAGATTCAAGTTGAGAACGTTGatgataaaattgtaaataatagtGCCGACAAGAATGCCGACGAAACCaacacatttgtaattaaaaaaggtccgaaattcaatttaaaaattgcgGTGAAAGATGATACATCAACAGATATTGTAATTGCGTTAGATGAAAAAATCACTTACGACTCAAATGATAATAAGATTTACGTCACACTGAAAACAGGGGAGCTTACTGTAGAATAA
Protein Sequence
MLQQMSSPPSVHVGEVASLVRLEGRVCGDASSEASSDAAEDCELPQCKIRRNYNCTKCTFYTQNPRVYLVHTRDVHFEKFKIYDCPHCVYASRHHQKLVRHIKMVHAAPSPVVKTDLEPPPAPVSSSTITEPEERIEDLLEEVEDTEDVQIELEDGIEESMDRSADMEVDVDRPAAEESSELPKDKTKFFSCTKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGQSVASRRRNRVGASDIALADAALALVAKEEEGSGDSRSSHASEMGLQYADIEMISCASDNDTSTETVAKKDSELAQERHNQQSPNSTSGETKSNKQSRKIPRPIPQLIPLNTSTPNQNKSPPGEPPLKKFKEDPSIESSEINTVDNLDNLPNDITLIPIHNGTPVTAKEPTVKKKNESFFDRLKERLLTATGEEGTLTCKNCGFESKCLSEHSVHEKNCTVSANRVLANNTHTSLGSTRCQNCRHRCKSSADLYVHMQTCGKQEKVENEQSNDNGNKSEATSSTHETDVAKDEPHPMENVVFVWNNINTDSTKFETPLDININDDSTMPESSKNYDSEVVDENEVMNLSPSQAAGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFFAIPVLNEYGETEFEYIDPNLANSSMEIDEPFNETNDNINTTLEMQPLNLQTQHGEHRFETMDDKNEDKKPKKTMWKCKKCNYKDPSKEALLAHVREHSKPEDGHEDKPQAFTKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDASLLNEMNDTCTKCPFKAIDRKQLQGHMQQHQPSPQSIFKCYFCPYFVKTEHDLMQHLALHGVTDPEDYISKAMGCKSPLPEHQGHSGSSNSTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIMTKKTEMELEMEAASSSKMDSKIDISIDLNEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSEITIYKCLECKFTCDNAGRLAEHSRTHGEIYGRIYCPVESDIPDEEQIAKLRKVIEAEKLNSESPREDMSSKDGEEIKILFFCHKCPARFFIDSDLRVHDKFHDLLFENKCKYCEFSVPQETELNAHLVCHSDEYATETKMLKFKHRSHPAHKDPKVELVHCPATSDVNWIVSTPSKNYEIVDSSKKCTENKVPKQYFCKECPAKFFKTSALSYHTGLHGGDGEHKCKKCSYTVKNLGNLAKHESLHENEGKTTTCDYESGEDNDYKNIPLSGTDLFQRKTEAQKRVVTDKNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAVAERKKSNEETNEAENETQEDKLAKGNIKLAIKTMPKGPTRPKSDFQQFSVSDQQTLRLLQMRRSINNAENEKNPEPTPTKERKLHMCLLCPYTNQRQDALTNHYKRHDENINANNVVHKCPHCDLVVVQSHFLRDHLKTHFNYQKHLVPECFAASENVTFVVKQLDDENVKKEDNAEIKIEDNSDKEIQVENVDDKIVNNSADKNADETNTFVIKKGPKFNLKIAVKDDTSTDIVIALDEKITYDSNDNKIYVTLKTGELTVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00150040;
90% Identity
-
80% Identity
-