Basic Information

Insect: Notocelia uddmanniana
Gene Symbol: -
Assembly: GCA_905163555.1
Location: LR991056.1:10577981-10587269[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.22 26 7.1 3.4 2 22 196 216 195 216 0.95

2 15 0.2 23 7.3 0.2 2 23 473 494 472 494 0.96

3 15 0.012 1.4 11.1 3.1 2 23 570 591 569 591 0.97

4 15 0.087 10 8.4 1.9 1 23 599 621 599 621 0.97

5 15 0.12 14 8.0 3.6 1 23 656 678 656 678 0.95

6 15 0.00063 0.072 15.2 5.4 1 23 686 708 686 708 0.99

7 15 0.056 6.4 9.0 1.8 1 23 792 814 792 814 0.99

8 15 4.3 4.9e+02 3.1 2.2 1 19 869 887 869 891 0.90

9 15 0.32 36 6.7 1.3 2 20 898 916 897 919 0.94

10 15 0.035 4 9.7 0.8 1 23 985 1007 985 1007 0.95

11 15 0.0076 0.87 11.8 2.3 1 23 1013 1035 1013 1035 0.95

12 15 0.0086 0.98 11.6 2.6 1 23 1125 1147 1125 1147 0.97

13 15 0.00011 0.013 17.5 1.2 1 23 1153 1175 1153 1175 0.99

14 15 0.94 1.1e+02 5.2 2.2 1 23 1267 1289 1267 1289 0.96

15 15 0.0023 0.27 13.4 4.5 1 23 1301 1323 1301 1323 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.22	26	7.1	3.4	2	22	196	216	195	216	0.95
2	15	0.2	23	7.3	0.2	2	23	473	494	472	494	0.96
3	15	0.012	1.4	11.1	3.1	2	23	570	591	569	591	0.97
4	15	0.087	10	8.4	1.9	1	23	599	621	599	621	0.97
5	15	0.12	14	8.0	3.6	1	23	656	678	656	678	0.95
6	15	0.00063	0.072	15.2	5.4	1	23	686	708	686	708	0.99
7	15	0.056	6.4	9.0	1.8	1	23	792	814	792	814	0.99
8	15	4.3	4.9e+02	3.1	2.2	1	19	869	887	869	891	0.90
9	15	0.32	36	6.7	1.3	2	20	898	916	897	919	0.94
10	15	0.035	4	9.7	0.8	1	23	985	1007	985	1007	0.95
11	15	0.0076	0.87	11.8	2.3	1	23	1013	1035	1013	1035	0.95
12	15	0.0086	0.98	11.6	2.6	1	23	1125	1147	1125	1147	0.97
13	15	0.00011	0.013	17.5	1.2	1	23	1153	1175	1153	1175	0.99
14	15	0.94	1.1e+02	5.2	2.2	1	23	1267	1289	1267	1289	0.96
15	15	0.0023	0.27	13.4	4.5	1	23	1301	1323	1301	1323	0.98

Sequence Information

Coding Sequence: aTGGGTCTACAATATGCAGATATCGAAATGGTCAGCTGTACAAGTGACAACGAAACGAGTACGGACACGGTTGCCAAAAAAGACTCGGAATTGGCACAAGAATCACGCAATCAGCAATCACCCAACAACACATCGGTAGAAGGTAAAACAAACaagcaaagcagaaaaataccCCGGCCGATTCCACAGCTGATACCGCTGAACACTTCGACAccaaatcaaaataaatcacCGCCAGGGGAACCACCTCTCAAAAGGTTCAAAGAAAGCCCAAGTAAAGAAACTTCAGACGCTAAGCCAATCCAACATATTGACAACATACCAGCTGATATCACACTTATCCCTGTCAATAACGGTACACCAATCACAACAAAAGAACCTgcagtaaaaaagaaaaatgaatcGTTTTTCGACAGATTGAAAGAGAGGTTACTGACAGCAACTGGAGAAGAAGGAACTTTAACATGTAAGAACTGCGGTTTTGAAAGCAAGTGCTTATCAGAGCATTCCGTGCACGAAAAGAATTGTACAGTGTCCGCTAACAGGGTTTTGGCAAATAATACACACACGAGCCTTGGCTCCACTCGTTGCCAGAACTGTCGGCATAGATGCAAGTCTAGTGCCGATTTATATGTTCACATGCAAACATGCGGAAAAAAAGAGAAAGTAGAAAATGAAAAGTCAAATGACAATGCAAACAACAACGAAACTACTTCATCAACCCATGAAACTGACGTCGTCAAAGATGAGCCACATCCCATGGAAAATGTAGTTTTCGTATGGAACAATATAAATACCGATGCAACTAAATTTGAAACGCCGTTAGATATAAATATCAATGAGGATTCTACTATGCCGGGCGCGAGTAAAAACTATGACTCTGAAGTTGTCGATGAAAATGAAGTCATGAACTTGTCACCGAGCCAAGCTGCCGGGAAAAAGGTCTTTAAATGCCCGCATTGCACGTTCTGGGCATCGACTGCGTCACGGTTTCATGTTCATATTGTAGGGCATTTGAATAAAAAACCGTTCGAATGCTCCCTTTGCAAATATAAATCCAACTGGAGATGGGATATTACCaaacatattaaattaaaatcggcAAGAGACCCAGAGCATAATGATGCAAAGGTTTTGATGACTGATGAAACTGGAAGAAGGAACTAcagtaaatacaataaattcTTGGCAGTACCGATCGTAAGTGAATACGGAGAAACCCAGTTTGACTACATAGATCCAAATGCACTGGCGAACGGCAGCATGGAGCTCGATGAAACATTCAACGACACGAATGAAAACATGAATTCTACACTTGAAATGCAACCTCTTAACTTGCAAACTCTACAGGGCGAGAACAGATTCGAGGCAACGGATGATAAAAACGAAGACAAGAAACCTAAGAAAACAATGTGGAAATGCAAAAAATGCAACTATAGGGACCCTTCGAAGGACGCGTTGCTAGCCCACGTCCGCGAGCACTCCAAGCCCGACGACGGGCACGAGGAGAAACCCTTCAACAAGAAGCCCGACAACATGCCGGACCCCGCCGACTTAGCCTACCGCTGCGGACACTGCAACCAGCTCTCCAACTGGAAGCACGTTATACAGagACATTGTCGCCTGAAGCATGATGGGGTCATCAAAGTCATCACAACGATTAAACCAAAATCTGATGCCACGTCACTATTGAACGAACTGAACGATACTTGCACTAAATGTCCATTCAAAGCAACGGATCGAAAACAGCTCCAACACCACATGCAGCAGCACCAACCCTCGCCCCAGTCcatatttaaatgttatttcTGCCCGTACTTCGTTAAAACTGAGCACGATTTACTGCAGCATCTCGCTTTACACGGTGTCACCGACCCTGAAGACTACGTCTCTAAAGCGATGGGATGCAGGTCTCCGCTCCCGGAACACCAAGGACAACCGGGAGGTTCCTCTTCCAATAAACGTCACAAATGCACAGAATGTCCGTACGAAACAAATAGCAAGTCCCAGTTCATGTACCACGAGCAATTTCATAGACTTCCAGCCGATACTCCATACAAATGTCAAGAATGCAACTACAGTGTTTCCAAGAGACACTTGCTCCACCAGCATATGAGAGTTCACGGAATCATGCCCAAGAAATCTGAAATGGAATTAGAAATGGAAGCGTCCTCATCTTCTTTTAAGTTTGATAACACAATGGACATTCCTATAGATTTAACCGAAATCCCATTCGTCTGGGTTTCAGCCAAAAACGAATTCCACAAAATGTACAAATGCCGTTATTGTTCTTATGTAAATTCCCAGAAATGTAAAATTCCAAACCACGAGAAAATTCACTGCATTGTGTTTGAAAACAGTGAAATCACTATTTATAAATGTCTGGAATGCAAGTTTACATGCGATAATGCTGGAAGGTTGGCAGAACATTCGAGAACACACGGAGAAATTTATGGACGTATTTATTGTCCGGTCGAATCTGATGTTCCCGATGAGGAACAAATTGCCAAATTACGGAAAGTCATAGAGGCCGAGAAATCAAACAACTCTGAAAGTCCAAGAGATGAAATAGTATCAAAAGACAGTGAGGAAATTAAAATACTGTACTTCTGTCATAAGTGTCCGGCGAGATTTTTCATCGATAGTGACTTAAGGATCCATGACAAATTTCACGATTTGCTATTTGAGAATAAATGCAAGTATTGTGAATTTTCAGTTCCCCAAGAAGCTGAGTTGAATACTCATCTGCTATGCCACTCAGATGAGTACGCGACGGAAAGTAAAATGTTCAAGTTTAAGCATCGCTCGCACCCCGCGCACAAGGAGCCCAAGTTGGAACTGGTACACTGCCCAGTCACTTCAGATATCAATTGGATAGTTTCTCATCCAGCTACCAATTATGAACTAGCGGACTCCTCGAAAAAATGCCATGAAAACAGAGTGCCTAAACAATACTTTTGCAAGGAATGCCCAGCCAAATTCTTTAAAACTTCAGCGTTAAGTTATCACATGGGATTACATGGAGGAGATGGCGACCATAAGTGTAAAAAATGTAGTTACACTGTTAAAAACTTAGGGAATTTGGCCAAGCATGAATCGTTACACGAGAACGAAGGTAAAACCACCACATGTGACTATGAGTCCGGAGAAGACAATGATTACAAAAACATTCCATTATCTGGTACAGACCTATTTCAAAGGAAAACTGAAGCGCAGAAAAGAGTTGTAACAGACAAAAATAAGCTGGTGAAGCCCAACGATCATTTCCCACCAGTACTTCAAGCAGATCCTCAATTCGGATACCTAATGCACGGCAATCCAGAGTTTATCTACCCTACATATTTAAAGAATGGTcgacaaaaagaaaaaagatacaAGTGCCACAAGTGCCCATCGGCATTTGAGAAAAGAgaacaatacaaaatacatttgtCACTGCACGGATCCAAACAGAGATACAAATGCGAAGTTTGTGATTACTCTGTTAAATATTACGCCAACTACGTGCAGCATATGAGAAAACATCAAATGAATGACGAAGCTCACGCAGAGAGGAAGAAAACTAATGAAGAGTCTACTGAGGCTGATAATGAGACACAAGAAGATAAAACATCAAAAGGAAATCTCAAACTAGCGATTAAAAcaatgccaaaggggccaacaAGGCCGAAGAGCGATTTCCAGCAGTTTTCTGTCAGTGACCAACAGACACTCCGCCTACTACAGATGAGACGGTGTATAAATAGTGCTGAAAAAGAAAAGCAACCAGAGTCCACTCCCACAAAGGAACGAAAGCTACACATGTGTCTCTTATGCCCCTACACGAACCAGCGCCAAGATGCATTAACCAATCACTACAAAAGGCATGATGATAACCTCCATTCCAACAATGGGTCAACTCATAAATGTCCCCATTGTGACCTCGTCGTCGTACAGTCACACTTCCTACGGGAGCATTTGAAAACTCATTTCAATTATCAAAAGCACTTGATCCCTGAATGCTATTCAGCTAGAGAAGGCGTGACATTTGTTGTACAAAAACTTGATGATGAAGATGTTAACAAAGATGAAGACAAGGGTGAAATTAAAGATGAAGATAGCACTGATAAAGAGAAACCTGAAAAACATGACGACAAATGTGAAAATAAACTCGATGGTAAGAAGCCCGAAGAAAACCACATTTTGGAATTTAAAAATGGTGCGAaattgaaactaaaaattgcgaTGAAAAAGGACACCTCCGATGATTTAATAATCACGCTAGATGAAAAAATTAATTTCGATTCAAATGATAATAAGATTTTTGTTAAACTCAAAACAGGGGAGCTCACGGTAGAGTAA
Protein Sequence: MGLQYADIEMVSCTSDNETSTDTVAKKDSELAQESRNQQSPNNTSVEGKTNKQSRKIPRPIPQLIPLNTSTPNQNKSPPGEPPLKRFKESPSKETSDAKPIQHIDNIPADITLIPVNNGTPITTKEPAVKKKNESFFDRLKERLLTATGEEGTLTCKNCGFESKCLSEHSVHEKNCTVSANRVLANNTHTSLGSTRCQNCRHRCKSSADLYVHMQTCGKKEKVENEKSNDNANNNETTSSTHETDVVKDEPHPMENVVFVWNNINTDATKFETPLDININEDSTMPGASKNYDSEVVDENEVMNLSPSQAAGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPIVSEYGETQFDYIDPNALANGSMELDETFNDTNENMNSTLEMQPLNLQTLQGENRFEATDDKNEDKKPKKTMWKCKKCNYRDPSKDALLAHVREHSKPDDGHEEKPFNKKPDNMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTIKPKSDATSLLNELNDTCTKCPFKATDRKQLQHHMQQHQPSPQSIFKCYFCPYFVKTEHDLLQHLALHGVTDPEDYVSKAMGCRSPLPEHQGQPGGSSSNKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIMPKKSEMELEMEASSSSFKFDNTMDIPIDLTEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSEITIYKCLECKFTCDNAGRLAEHSRTHGEIYGRIYCPVESDVPDEEQIAKLRKVIEAEKSNNSESPRDEIVSKDSEEIKILYFCHKCPARFFIDSDLRIHDKFHDLLFENKCKYCEFSVPQEAELNTHLLCHSDEYATESKMFKFKHRSHPAHKEPKLELVHCPVTSDINWIVSHPATNYELADSSKKCHENRVPKQYFCKECPAKFFKTSALSYHMGLHGGDGDHKCKKCSYTVKNLGNLAKHESLHENEGKTTTCDYESGEDNDYKNIPLSGTDLFQRKTEAQKRVVTDKNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAHAERKKTNEESTEADNETQEDKTSKGNLKLAIKTMPKGPTRPKSDFQQFSVSDQQTLRLLQMRRCINSAEKEKQPESTPTKERKLHMCLLCPYTNQRQDALTNHYKRHDDNLHSNNGSTHKCPHCDLVVVQSHFLREHLKTHFNYQKHLIPECYSAREGVTFVVQKLDDEDVNKDEDKGEIKDEDSTDKEKPEKHDDKCENKLDGKKPEENHILEFKNGAKLKLKIAMKKDTSDDLIITLDEKINFDSNDNKIFVKLKTGELTVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00150040;
90% Identity: iTF_00654917;
80% Identity: -