Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637477.1:12702425-12711462[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.045 3.5 9.4 4.1 1 23 83 106 83 106 0.97

2 18 0.0028 0.22 13.2 1.0 2 23 217 238 216 238 0.97

3 18 3.4 2.6e+02 3.5 1.4 1 23 244 266 244 267 0.94

4 18 0.29 22 6.9 3.4 2 22 511 531 510 531 0.95

5 18 0.45 35 6.2 0.3 2 23 788 809 787 809 0.96

6 18 0.015 1.1 10.9 1.9 3 23 886 906 884 906 0.96

7 18 0.91 70 5.3 0.7 1 23 914 936 914 936 0.97

8 18 0.15 12 7.7 3.6 1 23 971 993 971 993 0.95

9 18 0.00081 0.062 14.9 5.4 1 23 1001 1023 1001 1023 0.99

10 18 0.072 5.6 8.8 1.8 1 23 1107 1129 1107 1129 0.99

11 18 5.6 4.3e+02 2.8 2.2 1 19 1184 1202 1184 1206 0.90

12 18 0.59 45 5.9 0.1 2 20 1213 1231 1212 1232 0.95

13 18 0.045 3.5 9.4 0.8 1 23 1300 1322 1300 1322 0.95

14 18 0.0099 0.76 11.5 2.3 1 23 1328 1350 1328 1350 0.95

15 18 0.011 0.86 11.3 2.6 1 23 1440 1462 1440 1462 0.97

16 18 0.00015 0.011 17.2 1.2 1 23 1468 1490 1468 1490 0.99

17 18 1.2 94 4.9 2.2 1 23 1582 1604 1582 1604 0.96

18 18 0.0032 0.24 13.0 4.5 1 23 1616 1638 1616 1638 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.045	3.5	9.4	4.1	1	23	83	106	83	106	0.97
2	18	0.0028	0.22	13.2	1.0	2	23	217	238	216	238	0.97
3	18	3.4	2.6e+02	3.5	1.4	1	23	244	266	244	267	0.94
4	18	0.29	22	6.9	3.4	2	22	511	531	510	531	0.95
5	18	0.45	35	6.2	0.3	2	23	788	809	787	809	0.96
6	18	0.015	1.1	10.9	1.9	3	23	886	906	884	906	0.96
7	18	0.91	70	5.3	0.7	1	23	914	936	914	936	0.97
8	18	0.15	12	7.7	3.6	1	23	971	993	971	993	0.95
9	18	0.00081	0.062	14.9	5.4	1	23	1001	1023	1001	1023	0.99
10	18	0.072	5.6	8.8	1.8	1	23	1107	1129	1107	1129	0.99
11	18	5.6	4.3e+02	2.8	2.2	1	19	1184	1202	1184	1206	0.90
12	18	0.59	45	5.9	0.1	2	20	1213	1231	1212	1232	0.95
13	18	0.045	3.5	9.4	0.8	1	23	1300	1322	1300	1322	0.95
14	18	0.0099	0.76	11.5	2.3	1	23	1328	1350	1328	1350	0.95
15	18	0.011	0.86	11.3	2.6	1	23	1440	1462	1440	1462	0.97
16	18	0.00015	0.011	17.2	1.2	1	23	1468	1490	1468	1490	0.99
17	18	1.2	94	4.9	2.2	1	23	1582	1604	1582	1604	0.96
18	18	0.0032	0.24	13.0	4.5	1	23	1616	1638	1616	1638	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAAATGTCCTCGCCGCCGAGCGTTCACGTCGGCGAGGTCGCACCCCTTGTACGGCTCGAGGGCCGCGTGTGCGGCGACGCGTCCTCTGAGGCCTCCTCGGACGCCGCCGAAGATATTGAACTACCACAGTGCAAGATAAGAAGGAACTATAATTGCACCAAGTGTACGTTCTACACACAGAACCCGCGCGTTTATTTAGTGCATACGAGAGACATTCACTttgaaaagtttaaaatatACGACTGCCCTCACTGCGTCTACGCGTCGAGACACCATCAAAAACTTATAAGACACATAAAGATGGTacacgccgcgccggcgccagtTGTCAAAACGGATTTGGAACCTCCGCCGGCGCCCGTGCCTTCGACCACAGCAGAGCCGGACGAGCGAATTGAAGATTTACTCGAAGAAGTCGAGGACACAGACGAAGTTCCATTAGACTTAGAAGACAGTATCGAAGAGTCCATGGATCACTCCGCAGAGATGGAGGTTGACGTCGAAAGAACTGTCGCCGAAGAACCATCGGACTTAACAAAGGACAAGACTAAATTTTTCTCTTGCACCAAATGCAACTACGTCACTCACATTCGTGCAAGATTCACCAAGCACGTGAAATACCATTCAATGCCAATGATTAAGTGTACGATGTGCGATTTCCGTACTCCATACAAATGGAATTTGGACCGGCATATGAAGAACCACGGAGGGACTGGGAGTTTCAATTGTTCCATGTGTAACTTCACCGCGGACATCAAGCAGAGTCTCACAGTGCACGAGATGAATCACCACACGCCGCCCGTGGGGCAATCGGTCGCCAGTCGCCGACGCAACCGGGTGGGTGCCAGCGACATCGCGCTCGCCGACGCGGCGCGAGCGCTCATCGTCAAGGAGGAGGAAGGGAGCGGCGACTCGCGCTCCTCGCACGCATCGgAAATGGGTCTCCAATACGCGGATATAGAAATGGTCAGTTGTACAAGTGACAACGAAACGAGTACGGAAACGGTTGCCAAAAAGGAATCAGAATTGGCACAAGAATCACGCAACCAGCAATCTCCCAACAGCACATCGGTGGAAGGAAAAACAAACAAGCAAAGCAGAAAAATACCTCGTCCGATACCACAGTTGATACCCCTGAACACATCGACGCCAAATCAAAATAAATCACCGCCTGGGGAACCACCGCTCAAAAGGTTCAAAGAAGGTCCAAGTAAAGAAACTTCAGTCGCTAACACAATCGAAAATATCGACAACTTACCAGCTGATATCACCCTTATACCTGTCAATAACGGTACACCCATCACAACAAAAGAACCCGCAgcaaaaaagaaaaatgaaTCGTTTTTCGACAGATTGAAAGAGAGGTTGCTGACAGCAACTGGAGAAGAAGGAAGTTTAACATGTAAGAACTGTGGTTTTGAAAGCAAGTGCCTATCAGAACATTCCGTGCACGAAAAGAATTGTACAGTATCCGCTAACAGGGTTTTGGCAAATAATACACACACGAGCCTTGGCTCTACGCGTTGCCAGAACTGTCGGCATAGATGTAAGTCTAGTGCCGATTTATATGTCCACATGCAAACATGCGGTAAAAAAGAGAAAGTAGAAAATGAACAATCAAATGACagtgaaaacaaaaacaaaaccacTTCATCAACCCATGAAACGGACGTTGTCAAAGATGAGCCACATCCCATGGAAAATGTAGTTTTCGTATGGAATAATATAAATACCGATGCAACTAAATTTGCAACGCCGTTAGATATAAATATCAATGACGATTCTACTATGCCGGAAGCAAGTAAAAATTATGACTCTGAAGTTGTGGATGAAAATGAAGTGATGAACTTGTCGCCGAGCCAAGCTGCCGGGAAAAAGGTCTTCAAATGCCCGCACTGCACGTTCTGGGCATCGACTGCCTCACGGTTTCATGTCCATATTGTAGGGCATTTGAATAAAAAACCCTTCGAATGCTCCCTTTGCAAATATAAATCCAACTGGAGATGGGACATTACCaaacatattaaattaaaatcagcAAGAGACCCGGAACATAATGATGCAAAGGTTTTGATGACTGATGAAACTGGAAGAAGGAACTACAGTAAATACAATAAGTTTTTAGCAGTACCGATCGTAAACGAATACGGAGAAAACGAGTTTGAGTACATAGACCCAAATGCACTGGCAAACGGTAACATGGAGTTCGATGAATCATTCAACGACTCGAATGAAAACATGAATTCTACACTTGACATGCAACCTCTTAACTTGCAAACTCTACAAGGCGAAAACAGGTTTGAGGCAACGGATGATAAAAACGAAGACAAGAAACCTAAGAAAACAATGTGGAAGTGCAAAAAATGCAACTACAAGGACCCGTCGAAGGACGCGTTGCTAGTCCACGTCCGCGAGCACTCCAAGCCCGAGGACGGGCACGAGGAGAAGCTCCACAACAAGAGACCCGAGAACACGCAGGACCCGGCCGACCTGGCCTACCGCTGCGGCCACTGCAACCAGCTATCCAACTGGAAGCACGTCATACAGaGACATTGTCGCCTGAAGCATGATGGGGTCATCAAAGTTATTACAACGGTGAAACCGAAACCTGATGGAACGTCACTATTAAATGAACTGAACGACATTTGCAATCAATGTCCATTCAAAGCAACCGACAGAAAACAGCTCCAACACCACATGCAGCAGCACCAGCCCTCTCCCCAGTCCATATTCAAATGTTACTTCTGTGCGTACTTCGTTAAAACTGAGAATGACTTACTACAACATCTCGCTTTACACGGTGTCACTGACCCCGAAGAATACATCTCTAAAGCAATGGGATGCAAGTCCCCGCTGCCGGACCACCAAGGACCACCGGGCGGGTCGTCTTCCACAAAACGTCACAAATGCACGGAGTGTCCGTATGAAACCAACAGTAAGTCCCAGTTCATGTACCACGAACAATTTCACAGACTTCCAGCCGACACTCCGTACAAATGTCAAGAATGCAATTACAGCGTTTCCAAGAGACACTTGCTTCACCAACATATGAGAGTGCACGGAATCATGCCCAAGAAAACTGAAATGGAACTAGAAATGGAAGCGTCCTCATCCTCTTGTAAGTTGGATAACAAAATGGACATTCCTATGGATTTAACTGAAATCCCATTCGTCTGGGTTTCAGCTAAAAATGAGTTTCACAAAATGTACAAATGCCGTTATTGTTCGTATGTGAATTCTCAGAAATGTAAAATACCAAATCACGAGAAAATTCACTGCATTGTCTTTGAGAACAGTGAAATCACTATTTATAAATGTCTGGAATGCAAGTTTACATGCGATAATGCTGGAAGGTTGGCAGAACATTCGAGGACCCACGGGGAAATTTATGGACGCATTTATTGTCCCGTCGAATCTGATGTTCCCGACGAGGAACAAATTGCCAAATTACGGAGAGTCATAGAGGCCGAGAAACTTAACAACTCTGAAAGTCCAAGAGATGAGATGCTTTCAAAAGACAGCGAGGAAATTAAAATACTGTACTTCTGTCATAAGTGTCCAGCTAGATTTTTCATCGACAGTGATTTGAGGATCCATGACAAGTTTCACGATCTGCTGTTTGATAATAAATGCAAGTATTGTGAGTTTTCAGTTCCTCAAGAAACTGAACTGAGTGCTCATTTGGTATGCCACTCGGATGAGTATGCGACGGAAACTAAAATGTTTAAGTTTAAGCATCGCTCTCACCCCGCGCACAAGGAGCCCAAGTTGGAACTCGTACACTGTCCAGTCACTTCAGAGGTCAACTGGATAGTTTCTCACACCGCGACTAATTATGAAGTAGCGGACTCCTCGAAAAAATGCCATGAAAATAGAGTGCCTAAGCAATACTTTTGCAAGGAATGTCCAGCGAAATTCTTTAAAACATCAGCGTTAAGTTATCACATGGGGTTACATGGAGGAGATGGCGACCACAAGTGTAAAAAATGTAGTTACACTGTTAAAAACTTAGGGAATTTAGCCAAGCACGAATCGTTACACGAGAACCAAGGTAAAACCACCACATGTGACTATGAGTCTGGAGAAGATAACGATTACAAAAACATTCCATTATCTGGTACAGATTTATTTCAACGGAAAACTGAAGCGCAGAAAAGAGTTGTAACAGACAAAAATAAGCTAGTGAAGCCTAACGACCATTTCCCACCGGTACTGCAAGCAGATCCTCAATTCGGATATCTAATGCATGGCAATCCAGAGTTTATCTACCCTACATATTTAAAGAATGGCCGACAAAAAGAAAAAAGATACAAGTGCCACAAGTGCCCATCGGCATTTGAGAAAAGGGAACAATACAAAATTCATTTATCACTGCATGGGTCCAAACAGAGATACAAATGCGAAGTTTGTGATTACTCTGTAAAATATTACGCTAACTACGTACAGCATATGAGAAAACATCAAATGAATGACGAAGCTCAGGCAGAGAGGAAGAAAACTAATGAAGAGTCTACTGAAGCTGATAATGAGACACAAGAAGATAAACCATCAAAAGGAAATCTCAAACTAGCGATTAAAACAATGCCAAAGGGGCCAACAAGGCCAAAGAGCGATTTCCAGCAGTTTTCTGTCAGTGACCAACAGACACTCCGCCTGCTGCAGATGAGACGGTGTATTAATAGTGCTGAGAAGGAAAAACAACCAGAGTCCACTCCCACAAAGGAACGAAAGCTACACATGTGTCTGCTATGCCCTTACACGAACCAGCGCCAAGATGCTTTAACCAATCACTACAAGCGGCACGATGATAACCTCCATTCCAACAATGGGTCAACCCATAAATGTCCCCATTGTGATCTCGTCGTCGTACAGTCACATTTTCTGCGAGATCATTTGAAGACTCATTTCAATTACCAAAAGCACTTGGTCCCTGAATGCTATTCTGCTAGCGAAGGCGTGACATTTGTTGTACAGCGACTTGAGGATGATGTCCAAAAAGATGCAGACAAGGGTAAAGATGATGATGGCACAGATAAAGAGAAACCTGAGAAGAATGACGACAAATGTGAAAATAAAGTCGTTGTTAAGGAGCCCGAAGAAAGCAATATAATAGAATTTAAAAATGGTGCAAAATTAAACCTGAAAATTGCGATGAAAAAAAGCACCGATGATTTAGTAATACCGCTAGATGaaaaaattaattttgattCGAATGATAATAAGATTTTTGTTAAACTCAAAACAGGGGAGCTTATGGTAGAGTAA
Protein Sequence: MLQQMSSPPSVHVGEVAPLVRLEGRVCGDASSEASSDAAEDIELPQCKIRRNYNCTKCTFYTQNPRVYLVHTRDIHFEKFKIYDCPHCVYASRHHQKLIRHIKMVHAAPAPVVKTDLEPPPAPVPSTTAEPDERIEDLLEEVEDTDEVPLDLEDSIEESMDHSAEMEVDVERTVAEEPSDLTKDKTKFFSCTKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGQSVASRRRNRVGASDIALADAARALIVKEEEGSGDSRSSHASEMGLQYADIEMVSCTSDNETSTETVAKKESELAQESRNQQSPNSTSVEGKTNKQSRKIPRPIPQLIPLNTSTPNQNKSPPGEPPLKRFKEGPSKETSVANTIENIDNLPADITLIPVNNGTPITTKEPAAKKKNESFFDRLKERLLTATGEEGSLTCKNCGFESKCLSEHSVHEKNCTVSANRVLANNTHTSLGSTRCQNCRHRCKSSADLYVHMQTCGKKEKVENEQSNDSENKNKTTSSTHETDVVKDEPHPMENVVFVWNNINTDATKFATPLDININDDSTMPEASKNYDSEVVDENEVMNLSPSQAAGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPIVNEYGENEFEYIDPNALANGNMEFDESFNDSNENMNSTLDMQPLNLQTLQGENRFEATDDKNEDKKPKKTMWKCKKCNYKDPSKDALLVHVREHSKPEDGHEEKLHNKRPENTQDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDGTSLLNELNDICNQCPFKATDRKQLQHHMQQHQPSPQSIFKCYFCAYFVKTENDLLQHLALHGVTDPEEYISKAMGCKSPLPDHQGPPGGSSSTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIMPKKTEMELEMEASSSSCKLDNKMDIPMDLTEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSEITIYKCLECKFTCDNAGRLAEHSRTHGEIYGRIYCPVESDVPDEEQIAKLRRVIEAEKLNNSESPRDEMLSKDSEEIKILYFCHKCPARFFIDSDLRIHDKFHDLLFDNKCKYCEFSVPQETELSAHLVCHSDEYATETKMFKFKHRSHPAHKEPKLELVHCPVTSEVNWIVSHTATNYEVADSSKKCHENRVPKQYFCKECPAKFFKTSALSYHMGLHGGDGDHKCKKCSYTVKNLGNLAKHESLHENQGKTTTCDYESGEDNDYKNIPLSGTDLFQRKTEAQKRVVTDKNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAQAERKKTNEESTEADNETQEDKPSKGNLKLAIKTMPKGPTRPKSDFQQFSVSDQQTLRLLQMRRCINSAEKEKQPESTPTKERKLHMCLLCPYTNQRQDALTNHYKRHDDNLHSNNGSTHKCPHCDLVVVQSHFLRDHLKTHFNYQKHLVPECYSASEGVTFVVQRLEDDVQKDADKGKDDDGTDKEKPEKNDDKCENKVVVKEPEESNIIEFKNGAKLNLKIAMKKSTDDLVIPLDEKINFDSNDNKIFVKLKTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00150040;
90% Identity: iTF_00654917;
80% Identity: -