Afra022762.1
Basic Information
- Insect
- Anastrepha fraterculus
- Gene Symbol
- sip1
- Assembly
- GCA_037575425.1
- Location
- JAYXIM010029492.1:1158396-1161195[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-93 9.4e-89 299.0 16.9 1 275 420 689 420 689 0.98 2 2 0.17 2.5e+03 -0.9 0.0 158 190 702 733 694 745 0.58
Sequence Information
- Coding Sequence
- ATGTCTGATAATGAATACGAGCGGTTCGAGGTAACAGATTACGATTTAGAAAATGAATTTAATCCGGGACGTCGTAGAAATCTTTCAAAGAACCAGCAAATTTATGGCATTTGGGCCGATGATAGTGATAACGACAGCCCCGAAGAGTCCAGCAACCGGCGCGGACGCCGTGGGCGCGCTGGACTTGGTGACGGTGGTGGCAGTAAATCGAAAGACTACTCGGCACCGGTAAGTTTTGTCGCTGGTGGCATACAACAATCGGGCAAAAAGGATAAAAAGGCGCGTAAAACCAGCACAGACCAACAAATCACCGATGAGGAAAGTGATGAAGAAAATGCGCGTCCATCTTTTGGTCGCAAACAAGTTGAGGCGGATGATGGTGGTACCAGTGATTCGGCGACCAGTTCCGATGAGGAACGCACGCAACGGAAACGTGCAGAGGCAGGCCATCAGCAGCGCAGTAGTAGTGCGCGTCATAGTAGTAATCCAAATGTGGGCGCTTGGGAACAGCACACGCGTGGCATTGGCGCGAAATTGCTACTGCAGATGGGCTATCAACCAGGCAGGGGTTTGGGCAAAGACTTGCAAGGTATATCACAACCAGTGCAGGCGCATATGCGTAAAGGGCGCGGTGCGATTGGTGCCTATGGGCCAGAGGTGGCTGCTAGTGTTGGTGGAAAGGGGCCAGTGGCGAAAGAAGGTGAAGATGTGCGTGAGGCCaaagaatttaaagaaaaacttaacaaGTGGAAAAAATGCGGCGACGCACGTCAAGATAAAGGTAAACGTTACTACTACCGTTCGGTCGAGGAGGTGATTGAGAAGGGGAAAAAAGGGAGTTTCGCGCTCTCAGAAAATTTAAGCAAAAAGATTGGAAACGTTCCGGTTATAGATATGACCGGACCGGAAAAGCGCGTACTCAGCGGCTATCATGCCCTGGGACAAACGAAGGTGGTCGACGAAGAACTCTATGACTTGGAACAGGCTGTCACAGGCAGCAGCATTACCTCAAAGAAAGGCAGCACCTTTGCGCTGCCCGAACTGATGCACAATCTACAGCTTATTGTAAACCTCTGCGAACAGGACATTATAACGCTCGACAAAGCAGAGCGTGAGGCTACTGATCGCCAGGCAGCGTTAGAACATGAGCGCAAAAATCTTGAAGAAATCGTGCATTTGGAGAAGAATCACATCGATACGCTGGAACAAGCCTTACAGCTAGTAGAGGAGCTGACCACGAGCAATGAACTGCTGACACTACAACGTGCCGAGCAAATTTTTGTCAAACTGCAGCAGAACTATGCGGCCGAGTATAAAGAATTTGCGCTTGGCGATCTGGCCGCTGGTGTTATTGCACCACTTGTTAAAATAACTCTGGAAGATTGGAAACCACTCGAACAGCCGACGCAAAATGTTGAGCTTATCAAGAAGTGGCGCGGCATATTGGAAATGAACGTTGATCCGCAAAACGAGTCGCGCAATATTTTCGATCCTTACTCCTCGCTTGTATGGGCAGGTGTTATACCGAGTTTTCGCGCATGCGCTGCCTCCTGGAATCCGAAATTGCATCAACCTATGGCTGCACTGCTCGATTGTTGGGCGCCGCTATTCCCCACCTGGATACTGGACTCTGTGCTCGAGCAGCTAGTGCTGCCGCAGCTGAGCAACGGTGTGCGCGATTGGGATCCGCTCACGGACACAGTACCCATACATATTTGGATATTGCCGTGGAATAATATATTGGGTCATAAAATGGAGGAGTTCATCTTTCCTACGATACGCGAAAAATTGGCAACGGCTTTGCAGGCGTGGATGCCGCAAGATCGTTCAGCGCGCGCAATGCTCACGCCCTGGAAGGGTGCATTCAGTGACATCGAAATGCAGCGTTTCCTGTCACAACACATCATACCGAAACTGCAATTGGTACTGAATGAATTCATTATAAATCCACTGCAACAACAACTCGAGCTGTGGAATCAGGTGTGGGAGTGGCATGAGCTGATACCCACACATCAAATGGCACAGCTGCTCGATAAATATTTCTTTCCCAAATGGATGCAAGTGTTGGTGTTGTGGCTCAATCAATCGCCCGACTATGCGGAGATCTCGCGTTGGTATACCGGCTGGAAGAGCATGCTAACCGAGGACATGTTGCGTGAATCCTCGATCAAAGAGCATTTGCGGCGTGCGCTTGAGATGATGCATCGCGCGACCGACGTACTAGCACCAGGACTTGCTTCAATACCAACACCCATAATGACAGcgacaccaccaccaccgccgcctCCGACTATGTTGGATCTGCAAATGGTAGCACCAGCGCAATTGGAATTCAAGGAATTGGTCTCGCAGAAGTGCGCCGAACGAGGTATACTTTTTGCGCCAATGCCAGGACGAAGGGAGTTGGGCAAACAGGTTTACCGCGTCGGCAAGTTGTACTGTTATATTGATCGCAATGTTTGTATGCTAAGCGACAACAGCATGAAAAACTGGTTGCCCTCATCTGTGCAGCAGCTATTGGATCGAGCGATGTAA
- Protein Sequence
- MSDNEYERFEVTDYDLENEFNPGRRRNLSKNQQIYGIWADDSDNDSPEESSNRRGRRGRAGLGDGGGSKSKDYSAPVSFVAGGIQQSGKKDKKARKTSTDQQITDEESDEENARPSFGRKQVEADDGGTSDSATSSDEERTQRKRAEAGHQQRSSSARHSSNPNVGAWEQHTRGIGAKLLLQMGYQPGRGLGKDLQGISQPVQAHMRKGRGAIGAYGPEVAASVGGKGPVAKEGEDVREAKEFKEKLNKWKKCGDARQDKGKRYYYRSVEEVIEKGKKGSFALSENLSKKIGNVPVIDMTGPEKRVLSGYHALGQTKVVDEELYDLEQAVTGSSITSKKGSTFALPELMHNLQLIVNLCEQDIITLDKAEREATDRQAALEHERKNLEEIVHLEKNHIDTLEQALQLVEELTTSNELLTLQRAEQIFVKLQQNYAAEYKEFALGDLAAGVIAPLVKITLEDWKPLEQPTQNVELIKKWRGILEMNVDPQNESRNIFDPYSSLVWAGVIPSFRACAASWNPKLHQPMAALLDCWAPLFPTWILDSVLEQLVLPQLSNGVRDWDPLTDTVPIHIWILPWNNILGHKMEEFIFPTIREKLATALQAWMPQDRSARAMLTPWKGAFSDIEMQRFLSQHIIPKLQLVLNEFIINPLQQQLELWNQVWEWHELIPTHQMAQLLDKYFFPKWMQVLVLWLNQSPDYAEISRWYTGWKSMLTEDMLRESSIKEHLRRALEMMHRATDVLAPGLASIPTPIMTATPPPPPPPTMLDLQMVAPAQLEFKELVSQKCAERGILFAPMPGRRELGKQVYRVGKLYCYIDRNVCMLSDNSMKNWLPSSVQQLLDRAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00082126; iTF_00082938; iTF_00091239; iTF_00192810; iTF_01562890; iTF_00190668; iTF_00192084; iTF_00193558; iTF_01563770; iTF_00191356; iTF_00189949; iTF_00992591; iTF_01357946; iTF_01189421; iTF_01045461; iTF_00303801; iTF_01505398;
- 90% Identity
- iTF_00082126; iTF_00082938;
- 80% Identity
- -