Btry008009.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera tryoni
Gene Symbol
sip1
Assembly
GCA_016617805.2
Location
NC:63948541-63951603[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.3e-93 5.7e-89 298.0 15.8 1 275 421 690 421 690 0.98
2 2 0.17 1.2e+03 -1.5 0.0 244 269 704 729 695 738 0.66

Sequence Information

Coding Sequence
ATGTCGGATAATGAATATGAACGCTTTGAAATAACAGATTACGATTTGGACAATGAGTTCAATCCCGGCCGCCGGCGGaatctgtcaaaaaatcagcaaatttatgGCATTTGGGCCGATGACAGTGACAATGATAGCGCAGAAGAGTCCAGTCGTCGTGGACGACGTGGCCGTGCCGGTCTCGGCGGCGGCGGTGGTAGCAAATCAAAAGATTATACAGCACCAGTTAGTTTTGTCGCAGGTGGCATACAACAAGCgggtaagaaaaataaaaaagctgaGAAAGATACTGCTGAACAGCAAATAACCGATGAGGAAAGTGATGAAGCAAATGCGCGTCCCTCTTTCGGACGCAAACCAAAACAAGTGGAGGCTGCTGATGGTGATACCAGTGATTCAGCAACCACTTCGGATGATGATGAACGCTCACAAAAGCAGCGCGCTGAAATTGGCAGACAACAGCGTAGTAATAATGCGCGGCAAATGGGAAATCCAAATGTTGGCGCTTGGGAACAGCATACACGCGGTATTGGCGCTAAATTGCTGCTTCAAATGGGTTATAAACCAGGTAAAGGTTTGGGTAAAGATCTGCAGGGTATATCACAACCGGTGCAGGCACATGTGCGTAAGGGACGTGGTGCAATCGGCGCGTACGGACCAGAGGCGGCAGCCAGTGTGGGTGGTAAAGGGccTGTGGTAAAGGAGGATGAAGACGTGCGTGAAGCAAAAGAGTTCAAAGAGAAGCTTAATAAATGGAAGAAGAGCGGTGACACGCGCCAAGACAAGAGCAAGCGTTATTATTATCGCTCCGTTGAAGAGGTGATTGAAAAGGGCAAAAAGGGTAATTTCATGTTATCAGAAAAAATAAGcaAAAAGATTGGCAATGTTCCCGTCATCGACATGACTGGACCTGAGAAGCGTGTGCTGAGCGGCTATCATGCGCTGGGACAAGCAAAAGTTGCCGAAGAAGAACTCTACGACCTAGAACAAGCTGTGGCTAGCAGTAGCATTACCGCCAAGAAAGGCAGCACATTTGCCTTGCCCGAATTGATGCACAATCTACAGCTGATCGTGAATATGTGTGAACAGGATATAATTTCGCTCGATAAGGCAGAACGTGAGGCCACTGATCGGCAGGAAGCACTAGAGCATGAGCGCAAAAATCTTGAAGAAATCATACACCTGGAAAAAAATCACATAGACACGCTCGAACAAGCGCTAAAACTTGTCGAAGAACTAACAAGCTGCAATGATATGACACTACAGCGCGCAGAGCAAATTTTCGTCACGCTACAGCACGACTACGCTGCCGAGTACAAAGAGTTCGCTTTAGGCGATTTAGCAGCAGGGGTTATTGCGCCACTCGTGAAGATTACGCTGGAGAATTGGAAGCCCATCGAGCAGCCCACACAACATGTGGAACTGATTAAAAAGTGGCGTGGCATACTGGAGTCGAATGCTGAACCACAAAATGAGTCGCGTAACATTTTCGATCCGTACTCATCACTCGTCTGGGCTGGCGTTATACCGAGTTTCCGCGCATGCGCCGCCTCCTGGAATCCAAAATTGCATCAACCCATGGCTGCGCTACTCGACTGTTGGGCACCCCTATTTCCCACATGGGTACTCGATTCCGTGCTCGAGCAGTTGGTGTTGCCGCAACTCAGTAACGGCGTACGCGATTGGGATCCACTCACCGATACCGTCCCCATACACATTTGGATACTACCCTGGAACAATATACTCGGCCATAAAATGGAGGAATTCATATTTCCAACCATACGCGAAAAATTGGCCGCCGCTCTGCAAGCGTGGATGCCACAAGATCGTTCCGCACGCGCCATGCTCACACCATGGAAGGGCGCTTTCAACGACGTCGAAATGCAACGCTTTCTCTCGCAACACATTATACCCAAACTGCAATTGGTACTCAACGAGTTCATTATAAATCCGCTGCAACAACAGCTGGAACTCTGGAATCAAGTATGGGAGTGGCATGAACTTGTGCCCACGCCACAAATGGCGCAATTACTCGATAAATATTTCTTTCCGAAATGGATGCAAGTGTTGGTGTTGTGGCTAAATCAATCGCCCGACTTTGCGGAAATCTCACGCTGGTACACCGGCTGGAAGAGTATGTTCTCCGAGGAGATCTTACGTGAACCCGCCATCAAGGAACATTTGCGTCGCGCGCTTGAAATGATGCATCGCGCTACCGACGTTCTAGCCCCGCCCACACTGTCGTCCATACCAACACCCATATTGACGTCGACGccaccgccgccaccaccacccACAATGTTGGATATGCAGATGGTGCCGCCGGCGCAATTGGAGTTCAAAGAGTTGGTTTCACAGAAGTGCGCCGAACGCGGAATACTCTTTGCACCGCTGCCAGGTCGTCGGGAGTTGGGCAAGCAGGTTTACCGTGTGGGCAAGCTGTACTGTTACATAGATCGCAATGTTTGTATGCTCAGCGATGCCAGCATGAAAAACTGGCTGCCCACATCTGTGCAACAGCTGTTGGATCATGCACTGTCTGCTTAG
Protein Sequence
MSDNEYERFEITDYDLDNEFNPGRRRNLSKNQQIYGIWADDSDNDSAEESSRRGRRGRAGLGGGGGSKSKDYTAPVSFVAGGIQQAGKKNKKAEKDTAEQQITDEESDEANARPSFGRKPKQVEAADGDTSDSATTSDDDERSQKQRAEIGRQQRSNNARQMGNPNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPEAAASVGGKGPVVKEDEDVREAKEFKEKLNKWKKSGDTRQDKSKRYYYRSVEEVIEKGKKGNFMLSEKISKKIGNVPVIDMTGPEKRVLSGYHALGQAKVAEEELYDLEQAVASSSITAKKGSTFALPELMHNLQLIVNMCEQDIISLDKAEREATDRQEALEHERKNLEEIIHLEKNHIDTLEQALKLVEELTSCNDMTLQRAEQIFVTLQHDYAAEYKEFALGDLAAGVIAPLVKITLENWKPIEQPTQHVELIKKWRGILESNAEPQNESRNIFDPYSSLVWAGVIPSFRACAASWNPKLHQPMAALLDCWAPLFPTWVLDSVLEQLVLPQLSNGVRDWDPLTDTVPIHIWILPWNNILGHKMEEFIFPTIREKLAAALQAWMPQDRSARAMLTPWKGAFNDVEMQRFLSQHIIPKLQLVLNEFIINPLQQQLELWNQVWEWHELVPTPQMAQLLDKYFFPKWMQVLVLWLNQSPDFAEISRWYTGWKSMFSEEILREPAIKEHLRRALEMMHRATDVLAPPTLSSIPTPILTSTPPPPPPPTMLDMQMVPPAQLEFKELVSQKCAERGILFAPLPGRRELGKQVYRVGKLYCYIDRNVCMLSDASMKNWLPTSVQQLLDHALSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00081221;
90% Identity
iTF_00192810;
80% Identity
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