Zcuc010048.1
Basic Information
- Insect
- Zeugodacus cucurbitae
- Gene Symbol
- sip1
- Assembly
- GCA_028554725.2
- Location
- CM053020.1:59655917-59658706[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-93 3.5e-89 300.2 15.5 1 275 418 687 418 687 0.98 2 2 0.23 4.3e+03 -1.9 0.0 243 268 700 725 692 732 0.71
Sequence Information
- Coding Sequence
- ATGTCTGATAATGAATATGAGCGATTTGAAATAACAGACTACGATTTAGACAATGAGTTTAATCCAGGTCGAAGGCGGAATCTGTCGAAAAATCAACAAATCTacgGCATTTGGGCCGATGATAGTGATAATGACAGCGGCGAGGAAACCACTCGTCGTGGACGACGTGGCCGCAGTGGGCTCGGTGGCAGTGGCGGTAGTAAATCTAAAGATTATACAGCACCAGTTAGTTTTGTAGCTGGTGGCATACAACAGGCGggtaagaaaaagaaaaaggctGAGAAAGATAATGCAGAACAGCAAATAACCGATGAGGAAAGTGATGAAGCAGAGGCACGTCCCTCCTTCGGTCGCAAAAAAGTGGAGGCAGCTGATGGTGGCAGTAGTGGTTCAGAAACTAGTTCTGATGATGAACGCACGCAGAAGCAGCGCGCTGAAGTTGGTAGACAACAGCGTAGTCAAAATGCACGACAAATGGGAAATCCCAATGTTGGCGCTTGGGAGCAACATACACGTGGTATTGGCGCTAAATTGCTGCTACAGATGGGTTATAAACCAGGTAAAGGTTTGGGCAAAGATCTACAGGGTATATCACAACCGGTGCAAGCACATGTGCGTAAGGGGCGTGGTGCAATTGGTGCTTACGGACCAGAAGCGGCAGCGAGTGTGGGTGGTAAAGGGCCGGTGGTCAAAGAAGATGAAGACGTACGCGAAGCGAAAGAGTTCAAAGAGAAGCTTAATAAATGGAAAAAGAGCGGTGACACGCGTCAAGACAAGAGCAAACGTTATTACTATCGTTCCGTTGAGGAGGTGATTGAGAAGGGCAAAAAGGGAAATTTCATGTTATCGGAAAAAATTAGCAAAAAGATTGGCAATGTGCCCGTTATCGACATGACTGGCCCGGAAAAGCGCGTTTTAAGCGGCTATCATGCGCTGGGCCAAGCAAAAGTCGCCGATGAAGATCTCTATGACTTGGAACAAGCCGTCGCCAGCAGCAGCATTACCGCAAAGAAAGGCAGCACATTTGCCTTGCCCGAATTGATGCATAATCTCCAACTGATTGTGAATATGTGTGAACAGGATATAATTGCGCTCGATAAAGCAGAGCGTGAGGCCACTGATCGCCAGGAAGCGCTGGAACATGAGCGCAAAAATCTCGATGAAATAGTGCACCTCGAGAAGAATCACATCGATACGCTCGAACAAGCTTTGAAGCTTGTAGAAGAACTAACAACCAGCAATGATATGACACTACAACGTGCAGAGCAGATATTCGTCACGCTACAGCGCGACTACGCAGCCGAGTACAAAGAGTTCGCTTTAGGTGATTTAGCCGCAGGCGTTATTGCGCCGCTCGTCAAGTTAACCTTGGAAAGTTGGAAGCCACTCGAACAGCCTACACAACATGTGGAGCTCATTAAGAAGTGGCGCGGCATACTGGAGGCGAATGCGGATCCGCAAAATGAGTCGCGTAACATTTTCGATCCTTATTCGTCACTCGTGTGGGCTGGCGTTATACCGAGTTTCCGTGCATGCGCCGCCTCCTGGAATCCCAAATTGCATCAATCCATGGCTGCGCTACTCGATTGTTGGGCACCACTCTTTCCCACCTGGATACTTGACTCGGTGCTCGAGCAATTGGTGTTGCCACAACTAAGCAATGGCGTACGCGATTGGGATCCACTCACCGACACCGTACCCATACACATTTGGATACTGCCCTGGAACAATATACTCGGCCATAAAATGGAGGAATTCATATTTCCAACTATACGCGAGAAATTGGCCGCTGCTTTACAAGCGTGGATGCCACAAGATCGTTCCGCACGCGCTATGCTCACACCATGGAAAGGCGCCTTCAACGACATAGAAATGCAGCGCTTCCTCTCCCAGCATATTATACCCAAACTACAGCTGGTACTCAATGAGTTCATCATAAAtccactgcaacaacaattggaGCTATGGAATCAAGTATGGGAATGGCATGAACTAGTGCCCGCAGCGCAAATGGCACAATTACTCGATAAATATTTCTTTCCCAAATGGATGCAAGTGTTGGTGTTGTGGCTCAATCAATCGCCCGACTATGCGGAAATCTCCCGCTGGTATACCGGCTGGAAGAGCATGTTCTCCGAGGAGATATTACGTGAGCCTGTCGTTAAAGAGCATTTGCGCCGTGCGCTCGAAATGATGCATCGCGCAACCGATGTGCTGGCCGCACCCACGCTGACATCTATACCAACACCGATTTTAACGGCaacaccaccgccgccgccaccaccaacTATGTTGGATATGCAAATGGTGACACCGGCGCAATTGGAATTCAAAGAGTTGGTCTCACAGAAATGCGCCGAACGTGGCATACTCTTTGCGCCGTTGGCGGGTCGCCGGGAGTTGGGCAAGCAGGTTTATCGTGTGGGCAAATTGTACTGTTACATCGATCGTAATGTTTGTATGCTCAGCGATGTCAGCATGAAGAACTGGATGCCCACTTCTGTGCAGCAACTGCTGGATCGCGCCATGATTGGCTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNPGRRRNLSKNQQIYGIWADDSDNDSGEETTRRGRRGRSGLGGSGGSKSKDYTAPVSFVAGGIQQAGKKKKKAEKDNAEQQITDEESDEAEARPSFGRKKVEAADGGSSGSETSSDDERTQKQRAEVGRQQRSQNARQMGNPNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPEAAASVGGKGPVVKEDEDVREAKEFKEKLNKWKKSGDTRQDKSKRYYYRSVEEVIEKGKKGNFMLSEKISKKIGNVPVIDMTGPEKRVLSGYHALGQAKVADEDLYDLEQAVASSSITAKKGSTFALPELMHNLQLIVNMCEQDIIALDKAEREATDRQEALEHERKNLDEIVHLEKNHIDTLEQALKLVEELTTSNDMTLQRAEQIFVTLQRDYAAEYKEFALGDLAAGVIAPLVKLTLESWKPLEQPTQHVELIKKWRGILEANADPQNESRNIFDPYSSLVWAGVIPSFRACAASWNPKLHQSMAALLDCWAPLFPTWILDSVLEQLVLPQLSNGVRDWDPLTDTVPIHIWILPWNNILGHKMEEFIFPTIREKLAAALQAWMPQDRSARAMLTPWKGAFNDIEMQRFLSQHIIPKLQLVLNEFIINPLQQQLELWNQVWEWHELVPAAQMAQLLDKYFFPKWMQVLVLWLNQSPDYAEISRWYTGWKSMFSEEILREPVVKEHLRRALEMMHRATDVLAAPTLTSIPTPILTATPPPPPPPTMLDMQMVTPAQLEFKELVSQKCAERGILFAPLAGRRELGKQVYRVGKLYCYIDRNVCMLSDVSMKNWMPTSVQQLLDRAMIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00081221;
- 90% Identity
- iTF_00192810;
- 80% Identity
- -