Bdor009674.1
Basic Information
- Insect
- Bactrocera dorsalis
- Gene Symbol
- sip1
- Assembly
- GCA_000789215.2
- Location
- NW:137042-140326[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-93 4.5e-89 298.2 15.7 1 275 422 691 422 691 0.98 2 2 0.24 1.5e+03 -2.0 0.0 245 269 706 730 700 738 0.68
Sequence Information
- Coding Sequence
- ATGTCGGATAATGAATACGAGCGCTTTGAAATAACAGATTACGATTTGGACAATGAGTTCAATCCCGGCCGTCGGCGGAATCTGtcgaaaaatcaacaaatttatgGCATTTGGGCCGATGACAGTGACAATGATAGCGCAGAAGAGTCCAGCCGTCGTGGACGACGTGGCCGTGTCGGTcttggtggcggcggcggtggtagCAAATCAAAAGATTACACAGCACCAGTTAGTTTTGTTGCCGGTGGCATACAACAAGcgggtaaaaaaaataaaaaacctgtGAAAGATTCTGCTGAACAGCAAATAACCGATGAGGAAAGTGATGAAGCAAATGCGCGTCCTGCTTTCGGGCGCAAGCCAAAACAAGTAGAGGCTGCTGATGGTGATACCAGTGATTCAGCAACTACTTCGGATGATGATGAACGCTCACAAAAGCAGCGCGCTGAAGTTGGCAGACAACAGCGTAGTAATAATGCGCGACAAATGGGAAATCCAAATGTTGGCGCTTGGGAGCAGCATACACGCGGTATTGGCGCTAAATTGCTGCTGCAAATGGGCTATAAACCGGGTAAAGGTTTGGGCAAAGATCTGCAGGGCATATCACAACCGGTGCAGGCACATGTGCGTAAAGGACGTGGTGCAATCGGCGCGTACGGACCAGAGGCGGCAGCCAGTGTGGGTGGTAAAGGGcctgTGGTAAAAGAAGATGAAGACGTGCGCGAAGCAAAAGAGTTCAAAGAGAAGCTTAATAAATGGAAAAAGAGCGGTGACACACGTCAAGACAAAAGCAAGCGTTATTATTATCGTTCTGTGGAAGAGGTGATTGAGAAGGGCAAAAAGGGGAATTTTATGTTATCAGAAAAAATAAGcaagAAGATTGGCAATGTCCCCGTCATTGACATGACTGGACCTGAGAAGCGTGTGCTCAGTGGCTATCATGCGCTGGGACAAGCAAAAGTTGCCGATGAAGAACTCTACGACCTGGAGCAAGCTGTGGCTAGCAGTAGCATTACCGCCAAGAAAGGAAGCACATTTGCCTTGCCCGAATTGATGCACAACCTTCAGCTGATCGTGAATATGTGTGAACAGGATATAATTGCGCTCGATAAAGCAGAGCGTGAGGCCACGGATCGGCAGGAAGCACTAGAGCATGAGCGCAAAAATCTCGATGAAATCGTACACCTGGAGAAAAATCACATAGACACGCTCGAACAAGCGCTAAAACTTGTCGAAGAACTAACCAGCAGCAATGATATGACACTACAGCGCGCAGAGCAAATTTTCGTCACGCTACAACACGACTACGCTGCCGAGTACAAAGAGTTCGCTTTAGGAGATTTAGCAGCGGGTGTTATTGCACCGCTCGTGAAGATTACGCTGGAGAATTGGAAGCCCATCGAACAGCCCACACAACATGTGGAACTGATTAAGAAGTGGCGTGGCATATTGGAGTCAAATGCAGAACCACAAAATGAGTCGCGTAACATTTTCGATCCGTACTCATCACTCGTCTGGGCTGGCGTTATACCGAGTTTCCGAGCATGCGCCGCCTCCTGGAATCCAAAATTGCATCAACCCATGGCTGCGCTACTCGACTGTTGGGCGCCACTGTTTCCCACTTGGATACTTGACTCCGTGCTCGAGCAGTTGGTGTTGCCGCAACTCAGTAACGGTGTACGCGATTGGGATCCGCTCACCGATACCGTGCCCATACACATTTGGATACTCCCCTGGAATAATATACTCGGCCATAAGATGGAGGAATTCATCTTTCCAACCATACGCGAAAAATTGGCCGCTGCTCTACAAGCATGGATGCCACAAGATCGTTCCGCACGCGCCATGCTCACGCCATGGAAGGGCGCTTTCAACGACGTAGAAATGCAACGCTTCCTCTCGCAACACATTATACCCAAACTGCAATTGGTACTCAACGAGTTCATTATAAATCCACTGCAACAACAGCTGGAACTCTGGAATCAAGTATGGGAGTGGCATGAACTTGTGCCCACGCCACAAATGGCGCAATTGCTcgataaatatttctttcccAAATGGATGCAAGTGTTGGTGTTGTGGTTAAATCAATCGCCTGACTATGGGGAAATCTCACGTTGGTATACTGGCTGGAAGAGCATGTTCTCCGAGGAGATCTTGCGTGAACCCGCCATAAAGGAACATTTGCGTCGCGCGCTTGAAATGATGCATCGCGCTACCGACGTTCTAGCCCCGCCCACACTGCCCTCTATACCAACACCCATATTGACGTCGACGCCACCGCCGCCTCCACCACCTGCAATGTTGGATATGCAGATGGTGCCACCGGCGCAATTGGAGTTCAAAGAGTTGGTCTCACAGAAGTGTGCCGAACGCGGTATACTCTTTGCGCCGCTGCCAGGTCGTAGGGAGTTGGGCAAGCAGGTTTACCGTGTGGGCAAGCTGTACTGTTACATAGATCGCAATGTTTGTATGCTCAGCGATGCCAGCATGAAAAACTGGCTGCCCACATCTGTGCAACAGCTACTAGATCATGCCCTGTCTGCTTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNPGRRRNLSKNQQIYGIWADDSDNDSAEESSRRGRRGRVGLGGGGGGSKSKDYTAPVSFVAGGIQQAGKKNKKPVKDSAEQQITDEESDEANARPAFGRKPKQVEAADGDTSDSATTSDDDERSQKQRAEVGRQQRSNNARQMGNPNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPEAAASVGGKGPVVKEDEDVREAKEFKEKLNKWKKSGDTRQDKSKRYYYRSVEEVIEKGKKGNFMLSEKISKKIGNVPVIDMTGPEKRVLSGYHALGQAKVADEELYDLEQAVASSSITAKKGSTFALPELMHNLQLIVNMCEQDIIALDKAEREATDRQEALEHERKNLDEIVHLEKNHIDTLEQALKLVEELTSSNDMTLQRAEQIFVTLQHDYAAEYKEFALGDLAAGVIAPLVKITLENWKPIEQPTQHVELIKKWRGILESNAEPQNESRNIFDPYSSLVWAGVIPSFRACAASWNPKLHQPMAALLDCWAPLFPTWILDSVLEQLVLPQLSNGVRDWDPLTDTVPIHIWILPWNNILGHKMEEFIFPTIREKLAAALQAWMPQDRSARAMLTPWKGAFNDVEMQRFLSQHIIPKLQLVLNEFIINPLQQQLELWNQVWEWHELVPTPQMAQLLDKYFFPKWMQVLVLWLNQSPDYGEISRWYTGWKSMFSEEILREPAIKEHLRRALEMMHRATDVLAPPTLPSIPTPILTSTPPPPPPPAMLDMQMVPPAQLEFKELVSQKCAERGILFAPLPGRRELGKQVYRVGKLYCYIDRNVCMLSDASMKNWLPTSVQQLLDHALSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00081221;
- 90% Identity
- iTF_00192810;
- 80% Identity
- -