Bole013544.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- sip1
- Assembly
- GCA_001188975.4
- Location
- LGAM02027709.1:1321362-1326877[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-93 5.8e-89 298.5 15.8 1 275 422 691 422 691 0.98 2 2 0.21 2.1e+03 -1.8 0.0 243 268 704 729 696 737 0.69
Sequence Information
- Coding Sequence
- ATGTCAGATAATGAATACGAGCGCTTTGAAATAACGGATTACGATTTGGACAATGAGTTTAATCCCGGCCGCCGGCGAAATTTGtcgaaaaatcaacaaatttatgGCATTTGGGCTGATGATAGTGACAATGATAGTGCGGAAGAATCCAGCCGTCGTGGACGACGTGGCCGCGCCGGTCttggtggcggcggcggcggtagCAAATCAAAAGATTACACAGCACCAGTTAGTTTTGTAGCTGGTGGCATACAACAAGCgggtaagaaaaataaaaaggctGATCAAGATAAAGCGGAGCAGGAAATAACCGATGAGGAAAGTGATGAAGCAGATGCGCGTCCCGCCTTCGGGCGCAAACCAAAACAAGTAGAGGCGGCTGATGGTGGCACTAGTGAGTCATCAACTACTTCAGAGGATGATGAACGCACACAAAAGCAACGCGCTGAAGTTGGCAGACAAAAGCGTAGTAATAATGCGCGACAAATGGGAAATCCAAATGTTGGCGCTTGGGAACAATATACACGCGGTATTGGCGCTAAATTGCTGCTGCAAATGGGTTATAAACCAGGTAAAGGTTTGGGCAAAGATCTGCAGGGCATATCACAGCCGGTGCAGGCACATGTGCGTAAAGGTCGTGGTGCAATCGGAGCGTACGGACCTGAAGCGGCAGCCAGTGTGGGCGGTAAAGGAccTGTAGTTAAAGAAGATGAAGACGTGCGCGAAGCAAAAGAGTTCAAAGAGAAGCTTAATAAATGGAAAAAGAGCGGTGACTCGCGTCAAGACAAAAGCAAACGTTATTATTATCGTTCTGTGGAGGAGGTGATTGAGAAGGGCAAAAAAGGAAATTTCATGTTGTCAGAAAAAATAAGCAAAAAGATTGGCAATGTTCCCGTCATCGACATGACTGGACCTGAAAAGCGTGTACTCAGCGGTTATCATGCGCTGGGACAAGCAAAAGTCGCCGATGAAGAACTCTACGACTTGGAGCAAGCTGTCGCTAGCAGCAATATTACCACAAAGAAGGGCAGCACATTTGCCTTGCCCGAATTAATGCACAATCTCCAGCTGattgtaaatatgtgtgaacAGGACATAATTGCGCTCGATAAAGCACAGCGTGAGGCCACTGATCGGCAGCAAACGTTAGAACATGAGCGCAAAAATCTCAATGAAATTGTACACTTGGAGAAAAATCACATAGACACGCTTGAACAAGCTTTAAAGCTTGTGGAAGAACTAACAACCAGCAATGATATGACACTACAGCGTGCAGAGCAAATTTTCGTCACGCTACAACACGACTACGCCGCCGAGTACAAAGAGTTCGCTTTAGGCGATTTAGCAGCGGGCGTTATTGCACCGCTCGTGAAGATAGCTTTGGAAAATTGGAAGCCCGTCGAACAGCCGACACAACATGTGGAACTAATTAAGAAGTGGCGTGGCATACTGGAGTCGAATGTGGAACCACAAAATGAGTCACGTAACATTTTCGATCCGTACTCATCACTCGTATGGGCTGGCGTTATACCGAGTTTCCGCGCATGCGCCGCCTCTTGGAATCCGAAACTCCATCAACCCATGGCTGCGCTTCTCGACTGTTGGGCACCACTGTTTCCCTCATGGATACTTGACTCCGTGCTCGAACAGTTGGTGTTGCCACAACTCAGCAACGGCGTACGTGATTGGGATCCGCTCACCGATACCGTGCCAATACACATTTGGATACTGCCGTGGAACAATATACTCGGTTATAAAATGGAGGAATTCATATTTCCAACCATACGCGAAAAATTGGCCGCTGCTCTACAAGCGTGGATGCCACAGGATCGTTCCGCACGCGCCATGCTCACACCATGGAAGGGCGCCTTCAACGATGTAGAAATGCAACGTTTCCTCTCGCAACACATTATACCCAAACTGCAATTGGTACTCAATGAGTTCATTATAAATCCGCTGCAACAACAGCTGGAACTCTGGAATCAGGTATGGGAGTGGCATGAACTTGTGCCCACCCAACAAATGGCAGAATTACTCGATAAATATTTCTTTCCTAAATGGATGCAAGTGTTGGTGTTGTGGCTAAATCAATCGCCCGACTATGCGGAAATTTCACGCTGGTACACCGGCTGGAAGAGCATGTTCTCCGAGGAAATCTTACGCGAGCCTGTCATAAAGGAGCATTTGCGTCGCGCGCTTGAAATGATGCATCGCGCTACCGATGTACTTGCCCCGCCCACAATGTCGTCTATACCGACACCCATATTGACGGCGACGCCaccgccgccaccgccaccCACAATGTTGGACATGCAAATGGTGCCACCGGCGCAATTGGAGTTCAAAGAGTTGGTCTCGCAGAAGTGCGCCGAACGCGGCATACTCTTTGCGCCGCTGCCGGGTCGTAGAGAGTTGGGCAAACAGGTTTACCGTGTGGGCAAGCTTTACTGTTACATAGACAGGAATGTTTGTATGCTGAGCGATGCCAGCATGAAAAACTGGCTGCCCACATCTGTGCAACAGCTTTTAGATCATGCCATGTCTGCTTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNPGRRRNLSKNQQIYGIWADDSDNDSAEESSRRGRRGRAGLGGGGGGSKSKDYTAPVSFVAGGIQQAGKKNKKADQDKAEQEITDEESDEADARPAFGRKPKQVEAADGGTSESSTTSEDDERTQKQRAEVGRQKRSNNARQMGNPNVGAWEQYTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPEAAASVGGKGPVVKEDEDVREAKEFKEKLNKWKKSGDSRQDKSKRYYYRSVEEVIEKGKKGNFMLSEKISKKIGNVPVIDMTGPEKRVLSGYHALGQAKVADEELYDLEQAVASSNITTKKGSTFALPELMHNLQLIVNMCEQDIIALDKAQREATDRQQTLEHERKNLNEIVHLEKNHIDTLEQALKLVEELTTSNDMTLQRAEQIFVTLQHDYAAEYKEFALGDLAAGVIAPLVKIALENWKPVEQPTQHVELIKKWRGILESNVEPQNESRNIFDPYSSLVWAGVIPSFRACAASWNPKLHQPMAALLDCWAPLFPSWILDSVLEQLVLPQLSNGVRDWDPLTDTVPIHIWILPWNNILGYKMEEFIFPTIREKLAAALQAWMPQDRSARAMLTPWKGAFNDVEMQRFLSQHIIPKLQLVLNEFIINPLQQQLELWNQVWEWHELVPTQQMAELLDKYFFPKWMQVLVLWLNQSPDYAEISRWYTGWKSMFSEEILREPVIKEHLRRALEMMHRATDVLAPPTMSSIPTPILTATPPPPPPPTMLDMQMVPPAQLEFKELVSQKCAERGILFAPLPGRRELGKQVYRVGKLYCYIDRNVCMLSDASMKNWLPTSVQQLLDHAMSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00081221;
- 90% Identity
- iTF_00190668; iTF_00191356; iTF_00189949; iTF_00192084; iTF_00193558; iTF_01563770; iTF_01562890;
- 80% Identity
- -