Ttab013788.1
Basic Information
- Insect
- Trachelus tabidus
- Gene Symbol
- -
- Assembly
- GCA_030142655.1
- Location
- JARQTI010000884.1:456471-471589[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-09 6e-05 22.9 0.3 25 130 34 139 27 177 0.65 2 3 1 2.4e+04 -14.0 25.7 455 484 179 207 153 220 0.59 3 3 6.4e-07 0.015 15.0 0.5 341 381 253 293 220 302 0.82
Sequence Information
- Coding Sequence
- ATGTCGGTCCAGGCGGAGCAAGCGGCTGCAGGAGGAGGTCCTGACAGCCGTCACGGTCACCGTCATCACGGGCATCATCATGGACATCATCATCATTCGAATCCTCTTGCAGCCACCGCTCCGCTCTTCCGTGCTCCCGTGAggGTAAATCCCGATGCACAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGAAATTACTCGCTGGTTAAGCACTTTGTACTCGACGACTCCAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCGAGTCCGGCGCCGGGCTCGGCTTCCGGTCTCAGGACAAGTTCGATCTCAGGGACGACCTCGAGGAGCTCACCGTCCGCCCAAGAATTTAAGAAACCTGGCGGTCCACGCACGAGCTCCAGCGGCTCGAGCAGTCACGCTTCTCAACGCGGCGGGTTCGTCAAACCGGCCGACGGGAAACCACCCTACAGTGGCAGGGGTAGCTACTCGGGACAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGCAGCCATGGGCTTCTTCCTGCCAAGGGTCCTCCTCCTAattcttcatcatcatcatcctccacctcctcctccacgTCAAGTATCTCCTCTTCGTCCACCTCAGCCAATCTCAGTGGGAACGCAAACTTCGACGGCGCTTCTGGAAACGTCAGCGCCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGATTGCCTCTGGATAATGGAACGAATACCCGGCACGGAGCTACCGAAAATTCTGCTGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTGACGGCGATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGctGACCGAAGTCCCACCTGGCGAAGCCGCGAAGCCTCGTAAGTACACACACATCGATACTATTGAGTCGACTAGTGCGTTTTCCTTCGATTGCGTTCCGAGCGCGACTCTGGAATCCTCTGGGCTTCAGCCTTAG
- Protein Sequence
- MSVQAEQAAAGGGPDSRHGHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPGSASGLRTSSISGTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSSSSSTSSSTSSISSSSTSANLSGNANFDGASGNVSAGSTGSRIHSVAGRLPRLPLDNGTNTRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPRKYTHIDTIESTSAFSFDCVPSATLESSGLQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00296770;
- 90% Identity
- iTF_00296005; iTF_00296770; iTF_00294470; iTF_01473171; iTF_00297542; iTF_01395115; iTF_01130805;
- 80% Identity
- -