Cpar013526.1
Basic Information
- Insect
- Cephus parvus
- Gene Symbol
- -
- Assembly
- GCA_030142435.1
- Location
- JARQTA010000931.1:434345-455875[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-09 4.1e-05 23.4 0.6 25 130 34 139 26 177 0.62 2 3 1 2.3e+04 -14.0 23.0 461 481 185 205 157 219 0.58 3 3 9.2e-10 2.1e-05 24.3 1.2 342 433 254 342 230 356 0.74
Sequence Information
- Coding Sequence
- ATGTCGGTCCAGGCGGAGCAAGCGGCTGCTGGAGGAGGTCCTGACAGCCGTCACGGTCACCGTCATCACGGGCACCATCATGGACACCATCATCATTCGAATCCTCTCGCAGCCACCGCTCCGCTCTTCCGTGCTCCCGTGAGGGTAAATCCCGACGCCCAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGCAACTACTCGCTGGTGAAGCACTTCGTACTCGACGACTCGAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCGAGTCCGGCCCCGGCCTCAGCCTCCGGCCTCAGGACAAGTTCAAGTTCAGGGACGACCTCGAGGAGCTCACCGTCCGCTCAGGAATTCAAGAAACCTGGGGGTCCACGCACCAGCTCCAGCGGCTCCAGTAGTCACGCTTCTCAGCGCGGTGGGTTCGTCAAACCGGCTGACGGGAAACCACCCTACAGTGGCAGGGGCAGCTACTCGGGGCAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGCAGCCATGGTCTTCTTCCCGCCAAGGGTCCTCCTCCTAattcatcctcatcctcctcctcgtccacgtCAAGTATCTCCTCTTCGTCCAGCTCAGCCAATCTCAGTGGGAACGCAAACTTCGACGGCGCCGCTGGAAACGTCAGCGCCGGAAGCACCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGCTGCCTCTGGATAACGGAACGAATAGCCGGCACGGAGCTACCGAAAATTCTGCCGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTGACGGCGATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGcTGACCGAAGTCCCACCTGGAGAAGCCGCGAAGCCTCAAAGAGAGAGGCACCCGTCCAACAGGCTGTCTGCGGACTTGGAGCGCGACCTGAGCCTTTCCGAGGACAGCGAGGATGAGGAGGGAACCAAGGTACCTTCGGCCTTGGAGAAAAGAGTCCTCGGGACTCGCCGGAGTCGTTCGATGTAA
- Protein Sequence
- MSVQAEQAAAGGGPDSRHGHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASGLRTSSSSGTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSSSSSSTSSISSSSSSANLSGNANFDGAAGNVSAGSTGSTGSRIHSVAGRLPRLPLDNGTNSRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPQRERHPSNRLSADLERDLSLSEDSEDEEGTKVPSALEKRVLGTRRSRSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00296770;
- 90% Identity
- iTF_01474678;
- 80% Identity
- -