Spar013137.2
Basic Information
- Insect
- Syrista parreyssii
- Gene Symbol
- -
- Assembly
- GCA_030142615.1
- Location
- JARQTG010000424.1:282215-294661[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.056 4.8e+02 -0.4 0.3 2 26 56 80 55 86 0.80 2 4 1e-08 8.7e-05 21.9 1.5 25 130 106 211 98 249 0.61 3 4 2 1.7e+04 -13.5 19.9 461 479 257 275 231 283 0.54 4 4 4.7e-07 0.0041 16.4 0.5 340 383 323 366 301 400 0.72
Sequence Information
- Coding Sequence
- ATGACTCGAGCGACGAGAACTCTGGCAGCCAAGAAAGAGTTTGATTTCCTAAGGCACAAGTACGACGCTGCAACAAAGTCATTGGGAATAGAGTTGAGCCGCAGCGAAGCCAGGAAGTCATCGCACATTAGAAATCGCCCTGAATTGAGGATGCAGCGCGAGCAAAACGTGGACCGGGACCGTCTTCGGGAACGGGAACGACAGATCCGAGCGGCGATGTCGGTCCAGGCGGAGCAAGCGGCTGCAGGAGGAGGTCCTGACAGCCGTCACAGCCACCGTCACCATGGGCATCATCATGGACATCATCATCACTCGAATCCTCTTGCAGCCACCGCTCCGCTCTTTCGTGCTCCCGTGAGGGTAAATCCCGACGCACAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGCAATTACTCGCTGGTTAAGCACTTCGTACTCGACGACTCCAAGAGGCTCATCGGCATCGAGGGTGTCCCTGCGAGTCCGGCGCCAGCGTCAGCCTCCACCCTGAGGACGAGTGCGAGTTCAGGGACGACGTCGAGAAGCTCACCGTCGGCCCAAGAATTCAAGAAACCTGGCGGTCCTCGCACGAACTCCAGCGGATCGAGTAGTCACGCTTCTCAACGCGGTGGGTTCGTCAAACCGGCTGACGGAAAACCACCCTACAGTGGCAGGGGTAGCTACTCGGGACAGCCCGTGAAGCACGGTGGCAGCAGTAACGACCATCGCAGCAATGGGCTTCTTCCCGCCAAGGGTCCTCCTCCTAATTCAtcttcctcctcatcctccacATCGAGTATCTCCTCTTCGTCCAGCTCAGCCAATCTCGGTGGGAACGCAAACTTTGACGGCGGTGCTGGAAACGTCAACGCCGGAACCACCGGAAGCACCGGTAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGCTGCCGCTGGATAATGGAACGAATACCCGGCACGGAGCTAGCGAAAATTCTGCCGACCTCGAGAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTGACGGCCATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAACCCTGTACTCGCCAAGCTGACCGAAGTCCCACCTGGCGAAGCCGCGAAGCCTCCTCAGAGTAAGACCTGCGCCCAGCAACGTGCAGCAACGGCTACGTTGCCCGAGGAACGACGGAAGAAACCTGCAGCTTCAGTGATCTAG
- Protein Sequence
- MTRATRTLAAKKEFDFLRHKYDAATKSLGIELSRSEARKSSHIRNRPELRMQREQNVDRDRLRERERQIRAAMSVQAEQAAAGGGPDSRHSHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASTLRTSASSGTTSRSSPSAQEFKKPGGPRTNSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSNGLLPAKGPPPNSSSSSSSTSSISSSSSSANLGGNANFDGGAGNVNAGTTGSTGSRIHSVAGRLPRLPLDNGTNTRHGASENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPPQSKTCAQQRAATATLPEERRKKPAASVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00296770;
- 90% Identity
- iTF_01474678;
- 80% Identity
- -