Tiud013413.2
Basic Information
- Insect
- Trachelus iudaicus
- Gene Symbol
- -
- Assembly
- GCA_030142595.1
- Location
- JARQTH010000707.1:201561-214222[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.056 5e+02 -0.4 0.3 2 26 16 40 15 46 0.80 2 4 5.1e-09 4.6e-05 22.9 0.8 25 130 66 171 57 208 0.61 3 4 2 1.8e+04 -15.3 29.1 457 486 218 240 187 254 0.52 4 4 1.2e-06 0.01 15.1 0.1 341 381 289 329 262 347 0.82
Sequence Information
- Coding Sequence
- ATGGGGCGTCGGGGGTCACTCGAGAAAGAATTTGACTCAAGGCGCAACGTGGACCGGGACCGTCTTCGGGAACGGGAACGACAGATCCGAGCGGCGATGTCGGTCCAGGCGGAGCAAGCGGCTGCAGGAGGAGGTCCTGACAGCCGTCACGGTCACCGTCATCACGGGCATCATCATGGACATCATCATCATTCGAATCCTCTTGCAGCCACCGCTCCGCTCTTCCGTGCTCCCGTGAGGGTAAACCCCGACGCACAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGAAATTACTCGCTGGTGAAGCACTTTGTACTCGACGACTCCAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCGAGTCCGGCGCCGGCCTCAGCTTCCGGTATCAGGACAAGTTCAAGTTCAGGGACGACCTCGAGGAGCTCACCGTCCGCCCAAGAATTTAAGAAACCCGGCGGTCCGCGCACGAGCTCCAGCGGCTCGAGCAGTCACGCTTCTCAACGCGGCGGGTTCGTCAAACCGGCCGACGGGAAACCACCCTACAGTGGCAGGGGTAGCTACTCGGGACAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGCAGCCATGGGCTTCTTCCCGCCAAGGGTCCTCCTCCTAattcttcatcctcctcctcctcctcctcctcctcctccacgtCAAGTATCTCCTCTTCGTCCACCTCAGCCAATCTCAGTGGGAACGCAAACTTCGACGGCGCTTCTGGAAACGTCAGCGCCGGAAGTACCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGATTGCCTCTGGATAACGGAACGAACAGCCGGCACGGAGCTACCGAAAATTCTGCCGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTTACGGCGATCGCGCAGACCCCGAGAAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGctGACCGAAGTCCCACCTGGCGAAGCCGCGAAGCCTCGTAAGTACACACACATCGATACTATTGAGTCGGCTAGTGCGTTTTCCTTCGATTGCGCTCCGAGCGCGACTCTGGAATCCTCTGGGCTTCGCCCTTAG
- Protein Sequence
- MGRRGSLEKEFDSRRNVDRDRLRERERQIRAAMSVQAEQAAAGGGPDSRHGHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASGIRTSSSSGTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSSSSSSSSSSTSSISSSSTSANLSGNANFDGASGNVSAGSTGSTGSRIHSVAGRLPRLPLDNGTNSRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPRKYTHIDTIESASAFSFDCAPSATLESSGLRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00296770;
- 90% Identity
- iTF_01474678;
- 80% Identity
- -