Crja013977.2
Basic Information
- Insect
- Cephus rjabovi
- Gene Symbol
- -
- Assembly
- GCA_030264185.1
- Location
- JASCRG010000880.1:443399-455594[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.056 6.3e+02 -0.4 0.2 3 26 42 65 41 71 0.80 2 4 4.6e-09 5.1e-05 23.0 0.8 25 130 91 196 83 233 0.62 3 4 2 2.2e+04 -13.8 22.7 457 477 243 263 218 273 0.52 4 4 1.6e-06 0.018 14.6 0.4 342 381 313 352 289 360 0.81
Sequence Information
- Coding Sequence
- ATGGGACGTCGGGGGTCACTCGAGAAAGAGTTTGACTCAAGGCACAAGTACGAAGTTCCGGAAAAAGTTATTGGGAATAGCGTCGAGCCAGGAAATTGTCGCATATTTAAAGTCAGCCCGAACGTGGACCGGGACCGTCTTCGGGAACGGGAACGACAGATCCGAGCGGCGATGTCGGTCCAGGCGGAGCAAGCGGCTGCTGGAGGAGGTCCTGACAGCCGTCACGGTCACCGTCATCACGGGCATCATCATGGACACCATCATCATTCGAATCCTCTCGCAGCCACCGCTCCGCTCTTCCGTGCTCCCGTGAGGGTAAATCCCGACGCCCAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGCAACTACTCGCTGGTGAAGCACTTTGTGCTCGACGACTCGAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCGAGTCCGGCCCCGGCCTCAGCCTCCGGCCTCAGGACAAGTTCAAGTTCGGGGACGACCTCGAGGAGCTCACCGTCCGCCCAGGAGTTCAAGAAACCTGGCGGTCCACGCACCAGCTCCAGCGGCTCGAGCAGTCACGCTTCTCAGCGCGGTGGGTTCGTCAAACCGGCTGACGGGAAACCACCCTACAGTGGCAGGGGCAGCTACTCGGGACAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGCAGCCATGGGCTTCTTCCCGCCAAGGGTCCTCCTCCTAATTCATCCTCCttgtcctcctcctcctcctccacgtCAAGTATCTCCTCCTCGTCCAGCTCAGCCAATCTCAGTGGAAACGCAAACTTCGACGGCGCAGCTGGAAACGTCAGCGCCGGAAGTACCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGCTGCCTCTGGATAATGGAACGAATAGCCGGCACGGAGCTACCGAAAATTCTGCCGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTGACGGCGATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGctGACCGAAGTCCCACCTGGCGAAGCCGCGAAGCCTCGTAAGTAA
- Protein Sequence
- MGRRGSLEKEFDSRHKYEVPEKVIGNSVEPGNCRIFKVSPNVDRDRLRERERQIRAAMSVQAEQAAAGGGPDSRHGHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASGLRTSSSSGTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSLSSSSSSTSSISSSSSSANLSGNANFDGAAGNVSAGSTGSTGSRIHSVAGRLPRLPLDNGTNSRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00294470; iTF_00296005; iTF_01474678; iTF_00297542; iTF_01395115; iTF_01473171; iTF_01130805;
- 90% Identity
- iTF_01474678;
- 80% Identity
- -