Tgro025548.2
Basic Information
- Insect
- Tachina grossa
- Gene Symbol
- nfxl1
- Assembly
- GCA_949987645.1
- Location
- OX465276.1:45190782-45194305[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 5.4e+04 -5.3 2.6 15 19 177 181 177 181 0.87 2 19 0.2 3.6e+03 -0.4 0.4 4 10 212 218 211 218 0.95 3 19 2.8e-08 0.0005 21.6 16.0 1 18 226 242 226 243 0.98 4 19 2.9 5.2e+04 -4.0 2.3 6 10 269 273 268 273 0.88 5 19 3.7e-05 0.66 11.6 13.6 1 19 279 298 279 298 0.90 6 19 4.5e-09 8.1e-05 24.1 12.8 1 19 333 351 333 351 0.99 7 19 2.6 4.6e+04 -3.9 0.8 6 10 376 380 375 382 0.54 8 19 9.8e-06 0.18 13.4 9.2 1 18 386 403 386 404 0.95 9 19 3 5.4e+04 -5.0 2.3 5 10 427 432 427 432 0.91 10 19 0.00023 4.1 9.1 16.5 1 18 438 455 438 456 0.98 11 19 2.4e-10 4.4e-06 28.1 14.5 1 19 465 483 465 483 0.98 12 19 0.15 2.6e+03 0.1 10.8 9 19 528 538 519 538 0.88 13 19 0.02 3.6e+02 2.8 5.1 4 11 552 559 550 560 0.89 14 19 0.5 9.1e+03 -1.6 0.9 6 10 619 623 618 623 0.90 15 19 5e-06 0.09 14.4 4.5 1 11 629 639 629 640 0.96 16 19 3 5.4e+04 -5.0 2.5 15 19 653 657 653 657 0.87 17 19 0.0084 1.5e+02 4.0 16.5 3 18 669 684 668 685 0.91 18 19 3 5.4e+04 -6.8 3.1 10 13 692 695 691 695 0.68 19 19 3.4e-07 0.0061 18.1 12.3 1 18 736 755 736 756 0.91
Sequence Information
- Coding Sequence
- ATGCCGCCAACTAAAATAAAACAGCAAAGCTGTGCTAAAAATCCAACTGAAAAATTCAATGAGACTCATGCAAGAAATATAGAAATTGCTAAAAAGATGGTTGAAAATTATGTATCATCTTCTGAAGATGAGGACGAACTAGATGAGACAACGATTTTAGGCAAGTATCAATCAAAATTAAGTAGGAATGGGATAAATTTTGAAGGATTAATTTTTCTAGATTCACTATATCAGCATTACGGTGCGCGCAAAGAAAATTCGCATCTTTTAGCGAAGACAGCAGGATTTTTAGAAAACGTTTTACAAAGTGGAGCTGCTACGTGTCTTATTTGTATTGGCAGCATAAAGCGATCAAATGCAATATGGTCTTGTAaatattgttattgtttctttcatTTGAACTGTATTCAAAGATGGTCTAATGACAGTATGGCACAAGCAAAAGCTCAAAGTCAAAATGAGCAGGGTTACTACAATCATATGGGAGAATATGTGCCACCTCAAAAACCGAAAGCGTTACATTGGTATTGTCCGCAGTGTAGAAAGGAATTTGGAATACATGAGAAACCAATGGAATATGAGTGTTTTTGTGGCAAAGAAACTAATCCGCCATCGCAAGCCTGGTTAGTTCCGCATTCTTGTGGCGAAATATGTGGAAAATTTCTAACGCCTAATTGCGGCCATAAGTGTACATTGCTATGCCATCCTGGTCCGTGCCCACCTTGTGCACAATATGCTATTACATCTTGTAAGTGTGGGAAATCTGCTCCAAAATCTGTACGTTGTGTTGATAAGTTTTGGGAGTGTCAGAAGAAATGTGAATTATTATTGCCATGCAAGCAGCATATATGTAAGCAACTATGTCACAAAGTCGGGCAATGTCCGCCTTGCCAACAAACAAGCTTGCAACCATGTGAATGTGGCAGAGAAAATGCAAAACGTCAGTGCTGTGAACAGAAATGGCACTGTAAAAAACGTTGTGGGAAAACTTTCGAATGCGGCTTGCACAGTTGCGAAAAAGTTTGTCACTCAGGTGATTGTGGGGATTGTCCTTTAAGTTTGCCACGATTCTGTCCATGCGGTAAAACTaaaaaagttgGTCCTTGTTTTGAGGTGATAGATACTTGCGGCGATACTTGCCAAAAAATTCTTGCTTGTGGATTACACACTTGCACGCAACGTTGCCACAAAGACCGTTGTAATTTGtgtttaatCACAACAAAAAAGAAATGCCGTTGTGGTATGCGGGAAAAGGAGTTACCATGTTCCAAGGAATTTACTTGTGAAAcgaaatgtaaacaaataagAGACTGTGGCAAGCATCCCTGCAATCGTAAGTGCTGTGATAGAAATTGCCCACCATGTGACAAAGTGTGCGGCAAGCCATTGTCGTGTGGTAAGCACAAATGCCAATCAATTTGCCACAAAGGTCCTTGCTACCCTTGCCAGCAAAAATCTCAAATCAATTGTCGCTGtggcaaatctaaaaaaagtgttCCTTGCGGTCGGGAGCGTACAGCACGTGTGATTTGTTTGGAACCATGTCGTATTCCTTCGAAATGTCATCATGAGAATAAACATCGCTGTCATAAAAATGAATGTCCACCTTGTTCGTCAACATGCAATTTGCCAAATGATACGACTAATTGCGACCACAAGTGTATGGCAAAATGTCATGCAGCGGTTATGGTAGCTAAGAAAGCTAATATTGATGCTAAAAGCATATGGGAACCTACTAAGCAGTTTGAATTAAAGGCAATGCCTCATCCGCGGTGTGAACAAAAAGTAAGCGTAACTTGTATTGGTGGTCATGAAACGGCTGAGTGGCCCTGTTGGAATTCTAAGCCTACATCATGTCAACGTTTGTGTAACCGCTCCCTGCGCTGTGGAAACCACAAATGTGCTTTAGTCTGTCACGCTGTAGCTATTTTGGAAGACATGACGgAACAAGCTGGATGTTCTCCGTGCAGCGAAGGCTGCAAAATTCCTCGACCCGAAGGATGTACTCATACATGTCCTAGACCTTGCCACCAACCACCTTGCAATAGTTGCAATATTGCTATAAAAACTAAGTGTCATTGTGGTTTAATGTCCATTGTTTACAAATGCAGCGATTATTTCGATGTAGAAGCCAGTGAAGGTGAAATTTTGGAgaaaagagaaaatttaaaaagttgcGGAAATAGATGTTTGAAAAATtaCCCATGTGGTCATCGCTGTGCAGCTAAATGCCATTCTGGTCCTTGCCCGTATCCCGAATCATGTCGCAAAAAAGTGCGTATCTACTGTGATTGTAAACGTTTAAAATATGATATTTCTTGCGACAAGCATCGTGCTGgccttttaaaattaaattgcgATGAAAACTGTGttgaaacacaaaaaaatttagaacaaGTACGACAGGAAGAAGAGCTCCTTCGAAGAAAACAAGAGGAAGAACGCAATCGCTTAGAGGTGCAGCaatttgaaaagaaatttagCAAACGCAAACCCAAAGAACGTAAAGCATTAGAAGTGAAACAAAAAGATCCCATCAATTGGAAACTATTTGGAGTTTATGCTATTATTGTAGCAGCTGTGTTATTAGCGGTTGTTTTAGCTTTTTATGAAGATCGTTAG
- Protein Sequence
- MPPTKIKQQSCAKNPTEKFNETHARNIEIAKKMVENYVSSSEDEDELDETTILGKYQSKLSRNGINFEGLIFLDSLYQHYGARKENSHLLAKTAGFLENVLQSGAATCLICIGSIKRSNAIWSCKYCYCFFHLNCIQRWSNDSMAQAKAQSQNEQGYYNHMGEYVPPQKPKALHWYCPQCRKEFGIHEKPMEYECFCGKETNPPSQAWLVPHSCGEICGKFLTPNCGHKCTLLCHPGPCPPCAQYAITSCKCGKSAPKSVRCVDKFWECQKKCELLLPCKQHICKQLCHKVGQCPPCQQTSLQPCECGRENAKRQCCEQKWHCKKRCGKTFECGLHSCEKVCHSGDCGDCPLSLPRFCPCGKTKKVGPCFEVIDTCGDTCQKILACGLHTCTQRCHKDRCNLCLITTKKKCRCGMREKELPCSKEFTCETKCKQIRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVICLEPCRIPSKCHHENKHRCHKNECPPCSSTCNLPNDTTNCDHKCMAKCHAAVMVAKKANIDAKSIWEPTKQFELKAMPHPRCEQKVSVTCIGGHETAEWPCWNSKPTSCQRLCNRSLRCGNHKCALVCHAVAILEDMTEQAGCSPCSEGCKIPRPEGCTHTCPRPCHQPPCNSCNIAIKTKCHCGLMSIVYKCSDYFDVEASEGEILEKRENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPESCRKKVRIYCDCKRLKYDISCDKHRAGLLKLNCDENCVETQKNLEQVRQEEELLRRKQEEERNRLEVQQFEKKFSKRKPKERKALEVKQKDPINWKLFGVYAIIVAAVLLAVVLAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01398114; iTF_01400038; iTF_01075059; iTF_00901161; iTF_01138647; iTF_00742454; iTF_00350685; iTF_00655773;
- 90% Identity
- iTF_01075059;
- 80% Identity
- -