Nfer002153.1
Basic Information
- Insect
- Nowickia ferox
- Gene Symbol
- nfxl1
- Assembly
- GCA_936446695.1
- Location
- CAKZFO010000017.1:273375-276709[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.7e+04 -8.1 6.4 15 19 156 160 155 160 0.82 2 19 0.13 2.4e+03 -0.3 0.4 4 10 191 197 190 197 0.95 3 19 1.8e-08 0.00033 21.6 16.0 1 18 205 221 205 222 0.98 4 19 1.9 3.4e+04 -4.0 2.3 6 10 248 252 247 252 0.88 5 19 4e-05 0.75 10.9 13.3 3 19 260 277 258 277 0.90 6 19 4.8e-09 8.8e-05 23.4 12.4 1 19 312 330 312 330 0.99 7 19 0.83 1.5e+04 -2.9 0.5 1 8 355 361 354 362 0.50 8 19 1.3e-05 0.24 12.5 9.8 1 18 365 382 365 383 0.94 9 19 2 3.7e+04 -5.0 2.3 5 10 406 411 406 411 0.91 10 19 0.00015 2.7 9.1 16.5 1 18 417 434 417 435 0.98 11 19 1.6e-10 2.9e-06 28.2 14.5 1 19 444 462 444 462 0.98 12 19 0.095 1.8e+03 0.1 10.8 9 19 507 517 498 517 0.88 13 19 0.013 2.4e+02 2.9 5.1 4 11 531 538 529 539 0.89 14 19 0.33 6e+03 -1.6 0.9 6 10 598 602 597 602 0.90 15 19 3.3e-06 0.06 14.4 4.5 1 11 608 618 608 619 0.96 16 19 2 3.7e+04 -5.4 2.0 15 18 632 635 632 636 0.83 17 19 0.0079 1.5e+02 3.6 16.8 3 18 648 663 647 664 0.91 18 19 2 3.7e+04 -5.5 2.1 9 13 670 674 669 674 0.72 19 19 2.2e-07 0.0041 18.1 12.3 1 18 715 734 715 735 0.91
Sequence Information
- Coding Sequence
- ATGCCgctaactaaaataaaacaacaagacTGTGCTAAAAACCCAACTGAAAAATTCAATGAGGCTCATGCAAGAAACATAGAAATTGCTAAAAAGATGGTTGAAAATTATGTATCATCTTCCGAAGATGAGGACGAATTAGATGAGACAACGATTTTAGATTCATTATATCAGCATTACAGTGCGCGCAAAGATGCGCATCTTTTAGCGAAAACAGCAGgatttttagaaaatgttttacaaaGTGGAGCTGCTACGTGTCTTATTTGTATTGGCACCATAAGGCGATCAAATGCAATATGGTCCTGTAAATATTGTTACTGTTTCTTTCATTTGAACTGCATTCAAAGGTGGTCTAATGACAGTATGGCACAAGCAAAAGCTCAAAGTCAAAATGAGCAGGGGTACTACAATCATATGGGAGAATATGTGGCACCTCAAAAACCGAAAGCATTACATTGGTGTTGTCCGCAGTGTAGAAAGGAATTTGGAATACAAGAGAAACCAACGGAATATGAATGTTTTTGTGGCAAAGAAACTAACCCGCCATCGCAAGCCTGGTTAGTTCCGCATTCTTGTGGCGAAATATGTGGAAAATCTCTAATACCTAATTGTGGCCATAAATGTACATTACTATGCCATCCTGGTCCGTGCCCACCTTGTGCACAATATGCTTTTACATCTTGTAAGTGTGGGAAATCTGTTCCGAAATCTGCCCGGTGTGTTGATAAGTTTTGGGAGTGCCAGAAGAAATGTGAATTATTATTGCCATGCAAGGAGCATCTATGTAAACAACTATGTCACAAAGTCGGGCAATGTCCGCCTTGCCAACAAACAAGCTTGCAACCATGTGAATGTGGCAGAGAAACTGCAAAACGTCAATGCTGTGAACAGAAATGGCGCTGTAAAAAACGTTGTGGGAAAACTTTTGAGTGCGGCTTGCACAGTTGTGAAAAGATTTGTCACTCAGGTGATTGTGGAGATTGTCCTTTAAGTTTGCCACGATTCTGTCCATGTGGTAAAACTAAAAAAGTTGGTCCATGTTTTGAGGTGATAGATACTTGCGGCGATACTTGCCAAAAGGTTCTTGCATGTGGCTTACACACTTGCACGCAACGTTGCCACAAAGAACGTTGTAATTTGtgtttaatcacaacaaaaaagaaatgccGTTGTGGTATGCGCGAAAAGGAGTTACCATGTTCCAAGGAATTTACTTGTGAAACTAAATGTAAGCAAATAAGAGACTGTGGCAAGCATCCCTGCAATCGTAAGTGCTGCGATAGAAACTGTCCACCATGTGACAAAGTGTGCGGCAAGCCATTGTCGTGTGGTAAGCACAAATGCCAATCAATTTGCCATAAAGGACCTTGCTACCCTTGCCAGCAAAAATCTCAAATCAATTGTCGCTGTGGCAAATCGAAAAAAAGTGTACCTTGCGGTCGAGAGCGTACAGCACGAGTGATTTGTTTGGAACCATGTCGtaTTCCTTCAAAATGTCATCATGAGAATAAACATCGCTGTCATAAAAATGAATGTCCACCTTGTTCGTCACCATGTAATTTGCCAAATAATACCACCAATTGCGACCACAAGTGTATGGCAAAATGCCATGCAGCGGTTAGGGTAGCTAAAAAAGCAAATGTTGATGCTAAAAGCATATGGGAACCTACTAAGCAGTTTGAATTAAAGGCAATGCCTCATCCGCGGTGTGAACAAAAAGTAAGAGTAACTTGTATTGGTGGTCATGAAACGGCTGAGTGGCCCTGTTGGAATTCTAAGCCTACATCATGTCAACGTTTGTGTAACCGCTCCCTGCGTTGTGGAAATCACAAATGTGCTTTAGTCTGTCACGCTGTAGCTATTTTGGAAGATATGACGgAACAAGCTGGATGTTCTCCATGCGGCGAAGGCTGCAAAATTCCTCGACCCGAAGGATGTACTCATACATGTCCTAAACCTTGCCACCAACCACCTTGCAATAGTTGCAATATTGCTATAAAAACTAAGTGTCATTGTGGCTTAATGCCCATTGTTTACAAATGCAGCGATTATTTCGATATAGAAGCGAGTGAAGGTGAAATTTTGgagaaaagagaaaatttaaaaagttgcgGAAATAGAtgtttaaaaaattaCCCTTGTGGTCATCGCTGTGCAGCTAAATGCCATTCTGGTCCTTGCCCGTATCCCGAATCATGTCGCAAGAAAGTGCGTATTTACTGTGATTGTAAACGTTTAAAGTATGATATTTCTTGCGACAAGCATCGTGCAGgtcttttaaaattgaattgcGATGATAATTGTGttgaaactcaaaaaaatttagaacaaGTACGACATGAAGAAGAGCTCCTTCGAAGAAAACAAGAGGAAGAACGCAATCGCTTAGAGGTGGAGCagtttgaaaagaaatttagcaaacgCAAACCCAAAGAACGTAAAACATTAGAAGTGAAACAAAAAGACCCCATTAATTGGAAACTATTTGGAGTTTATGCTACTATTGCAGCAGCTGTGTTATTAGCAGTTGTTTTAGCTTTTTATGAGGATCGTTAG
- Protein Sequence
- MPLTKIKQQDCAKNPTEKFNEAHARNIEIAKKMVENYVSSSEDEDELDETTILDSLYQHYSARKDAHLLAKTAGFLENVLQSGAATCLICIGTIRRSNAIWSCKYCYCFFHLNCIQRWSNDSMAQAKAQSQNEQGYYNHMGEYVAPQKPKALHWCCPQCRKEFGIQEKPTEYECFCGKETNPPSQAWLVPHSCGEICGKSLIPNCGHKCTLLCHPGPCPPCAQYAFTSCKCGKSVPKSARCVDKFWECQKKCELLLPCKEHLCKQLCHKVGQCPPCQQTSLQPCECGRETAKRQCCEQKWRCKKRCGKTFECGLHSCEKICHSGDCGDCPLSLPRFCPCGKTKKVGPCFEVIDTCGDTCQKVLACGLHTCTQRCHKERCNLCLITTKKKCRCGMREKELPCSKEFTCETKCKQIRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVICLEPCRIPSKCHHENKHRCHKNECPPCSSPCNLPNNTTNCDHKCMAKCHAAVRVAKKANVDAKSIWEPTKQFELKAMPHPRCEQKVRVTCIGGHETAEWPCWNSKPTSCQRLCNRSLRCGNHKCALVCHAVAILEDMTEQAGCSPCGEGCKIPRPEGCTHTCPKPCHQPPCNSCNIAIKTKCHCGLMPIVYKCSDYFDIEASEGEILEKRENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPESCRKKVRIYCDCKRLKYDISCDKHRAGLLKLNCDDNCVETQKNLEQVRHEEELLRRKQEEERNRLEVEQFEKKFSKRKPKERKTLEVKQKDPINWKLFGVYATIAAAVLLAVVLAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01399151;
- 90% Identity
- iTF_01398114; iTF_01400038; iTF_01399151;
- 80% Identity
- -