Lvul018529.1
Basic Information
- Insect
- Linnaemya vulpina
- Gene Symbol
- nfxl1
- Assembly
- GCA_963675445.1
- Location
- OY776278.1:18840844-18843891[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 4.4e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 20 0.13 2.8e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 20 1.8e-08 0.00039 21.6 16.0 1 18 206 222 206 223 0.98 4 20 1.9 4.1e+04 -4.0 2.3 6 10 249 253 248 253 0.88 5 20 3.7e-05 0.81 11.0 12.6 3 19 261 278 259 278 0.90 6 20 2 4.4e+04 -4.8 1.1 6 10 303 307 303 307 0.81 7 20 1.6e-08 0.00035 21.8 13.9 1 19 313 331 313 331 0.99 8 20 0.83 1.8e+04 -2.9 0.5 1 8 356 362 355 363 0.50 9 20 2.4e-08 0.00052 21.2 10.7 1 18 366 383 366 384 0.96 10 20 2 4.4e+04 -5.0 2.3 5 10 407 412 407 412 0.91 11 20 1.4e-06 0.031 15.6 16.7 1 18 418 435 418 436 0.98 12 20 1.6e-10 3.4e-06 28.2 14.5 1 19 445 463 445 463 0.98 13 20 0.095 2.1e+03 0.1 10.8 9 19 508 518 499 518 0.88 14 20 0.00044 9.6 7.6 5.7 1 11 530 539 530 540 0.95 15 20 0.33 7.1e+03 -1.6 0.9 6 10 599 603 598 603 0.90 16 20 4.6e-06 0.1 13.9 6.1 1 12 609 620 609 620 0.97 17 20 2 4.4e+04 -4.8 1.9 15 18 633 636 633 637 0.85 18 20 0.0058 1.3e+02 4.0 15.0 3 18 649 664 648 665 0.91 19 20 2 4.4e+04 -5.5 2.1 9 13 671 675 670 675 0.72 20 20 2.8e-07 0.0061 17.8 12.9 1 18 716 735 716 736 0.91
Sequence Information
- Coding Sequence
- atgctgTCTACCAAAAGCAAACCAAAAAATTGCACCAAGAATTCCACCGATAAGTTCAACGAGGCTCATGCAAGGAACATAGAAGTCGCTAAAAAACTGGTGGAAAATTATGTATCATCTTCTGAAGATGAAGAGGAGTTAGatgaaacaacaattttaaaatCATTATATCAGCATTACACTACACGCAAGGAAGATGAACATCTATTGGCAAAGACAGCcggatttttggaaaatattttgcaaaccgGAGCTGCTACGTGTCTCATTTGTATTGGAAGCATAAAAAGAACAAATCCAATATGGTCCTgcaaatattgttattgtttcttTCATTTGAACTGCATACGACGATGGTCTAATGACAGTATGGCGCAGGCAAAATCCCAGACCCAAAATGAACAGGGGTACTACAATAATATGGGAGAATATGTGCCacccaaaaaaaataaaacactacaTTGGTGTTGTCCGCAATGTAGAAAAGAATTTGGGCAAGACGAGAGACCAGTGAAATATGAATGCTTCTGCGGCAAGGAAACTAATCCACCACCTCAAACCTGGCTAATTCCTCATTCTTGTGGTGAAATATGTGGCAAAGACCTGATGCCGAGCTGTGGCCATAAATGTACATTGTTGTGTCATCCCGGTCCATGCCCGCCTTGTGCTCAATACGCTATTGCAACATGTAAATGCGGAAAATCGTCAGCAAAATCTGTACGCTGTGTTGAAAAATTGTGGGAGTGCCAGAAAAAATGTGAATTGCTACTACCGTGTAGAGAGCATATATGTAAAAAGTTATGTCACAAAGTCGGCCAATGTCCACCATGTCAGCAAACTAGTATGCAATCTTGCGAATGCGGCAGAGAAAAATCTAAACGTCAGTGCTGTGAACTGAAGTGGCATTGTAAAAATCCATGCGGCAAATTATTATCTTGTGGTTTGcacaattgtaaaaaaatttgtcatcCAGGTGACTGCGGAGATTGTCCTTTAAGTTTGCCGAGATCCTGCCCATGTGGTAAAACTAAAAAGGTTGGTCCATGCTCGGAGCTTATAGATACTTGTGGAGATACttgtcaaaaagtacttatttgtgGTTTACACACTTGTTCCCAACGGTGCCATAAAGGAAACTGTAATTTgTGTTTAATCATAACCAAAAAGAAATGCCGCTGTGGTATGCGCGAAAAAGAATTACCATGTTCCAAAGAGTTTACTTGCGAAACCAAGTGTAAACAAATTCGAGACTGCGGCAAGCATCCCTGCAATCGCAagtgCTGCGATGGAAATTGTCCCTCATGTGACAAAGTGTGCGGTAAACCTTTGTCGTGTGGCAAACATAAATGTCAATCGATTTGTCACAAGGGACCCTGCTATCCTTGTCAGCAAAAATCGCAGATTAATTGTCGTTGCGGTAAGTCTAAAAAGGGTGTGCCATGCGGCCGAGAGCGCACAGCACGTGTGGTTTGTTTAGAACCGTGTCGCATTCCTTCAAAATGCCATCATGAAAACAAACATCGCTGTCATAAAAATGAATGTCCACCTTGTTCATTACCATGCGGTTTAATAAATGATACATCCAAGTGCGGCCATAAATGCATGGCAAAATGTCATGCATCGGTTAAGGTATCTAAAAAACCTAATCCTGATACTACGAGTATATGGGAACCTACCAAACAGTTTGAACTGAAACATATGCCACATCCGCGCTGTGAACAAAAAGTAAGCGTTACTTGTATTGGTGGGCATGAAAATGCCGAGTGGCCGTGTTGGAACTCAAAGCCTACATCCTGCCAGAGATTATGTAACCGGATTCTACGTTGTGGTAATCACAAATGTTCCTTAGTCTGCCACGAAGTGGAAAACTTAAATGACATGAAGGAACAAAGTGGGTGTTCACCTTGTAATGAGGGTTGCAATATCCCTCGACCCAAAGGATGTACTCACAAGTGTCCTAGACCCTGTCACCTACCACCATGTAATAGTTGCAATTTCGTTATCAAAACTAAATGTCATTGTGGCTTAATGCCCATTGTATACAAATGTAGCGAATATTTTAGCACAGAAATTGACGAAGGTGACATTTTGGAAAAACAAGAGAACTTGAAAAGTTGCGGAaatagatgtttaaaaaattaccCTTGTGGCCATCGCTGCACTGCTAAATGTCATTCAGGTCCTTGTCCCTATCCCGAATCTTGTCGCAAAAAACTTCGTATCTACTGTGATTGTAAACGTATAAAATCGGATGTGTCTTGCGATAAACATCGCGCTGGCGTTCAACACTTAAACTGCGatgaaaattgtgttaaaacgAAACAAATGCTAGAACAAACACGCCAAAAGGAAGAAGAGTTAATAAAGAAACAAGAGGAAGAGCGCAATCGTTTAGAAGTGGAACAGTTCGAAAAGAAATTTAGTAAGCGTAAACCTAAAGAACGCAAAACCTTTGAAGCGAAGCAAAAGAATCCCCTTAACTGGAATATAATCGGAGTTTATGCTGGTATTGTAGTAGCTGTATTGTTAGCAGTTGCATTAGCTTTCTATGAGGATCGCTAA
- Protein Sequence
- MLSTKSKPKNCTKNSTDKFNEAHARNIEVAKKLVENYVSSSEDEEELDETTILKSLYQHYTTRKEDEHLLAKTAGFLENILQTGAATCLICIGSIKRTNPIWSCKYCYCFFHLNCIRRWSNDSMAQAKSQTQNEQGYYNNMGEYVPPKKNKTLHWCCPQCRKEFGQDERPVKYECFCGKETNPPPQTWLIPHSCGEICGKDLMPSCGHKCTLLCHPGPCPPCAQYAIATCKCGKSSAKSVRCVEKLWECQKKCELLLPCREHICKKLCHKVGQCPPCQQTSMQSCECGREKSKRQCCELKWHCKNPCGKLLSCGLHNCKKICHPGDCGDCPLSLPRSCPCGKTKKVGPCSELIDTCGDTCQKVLICGLHTCSQRCHKGNCNLCLIITKKKCRCGMREKELPCSKEFTCETKCKQIRDCGKHPCNRKCCDGNCPSCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKGVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCSLPCGLINDTSKCGHKCMAKCHASVKVSKKPNPDTTSIWEPTKQFELKHMPHPRCEQKVSVTCIGGHENAEWPCWNSKPTSCQRLCNRILRCGNHKCSLVCHEVENLNDMKEQSGCSPCNEGCNIPRPKGCTHKCPRPCHLPPCNSCNFVIKTKCHCGLMPIVYKCSEYFSTEIDEGDILEKQENLKSCGNRCLKNYPCGHRCTAKCHSGPCPYPESCRKKLRIYCDCKRIKSDVSCDKHRAGVQHLNCDENCVKTKQMLEQTRQKEEELIKKQEEERNRLEVEQFEKKFSKRKPKERKTFEAKQKNPLNWNIIGVYAGIVVAVLLAVALAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01399151;
- 90% Identity
- iTF_00900221;
- 80% Identity
- -