Prud019987.1
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- nfxl1
- Assembly
- GCA_956483635.1
- Location
- OY101448.1:162297241-162300296[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 5.2e+04 -8.1 6.4 15 19 155 159 154 159 0.82 2 21 0.13 3.4e+03 -0.3 0.4 4 10 190 196 189 196 0.95 3 21 1.8e-08 0.00047 21.6 16.0 1 18 204 220 204 221 0.98 4 21 1.9 4.8e+04 -4.0 2.3 6 10 247 251 246 251 0.88 5 21 4.2e-05 1.1 10.8 11.6 1 19 257 276 257 276 0.88 6 21 1.1 2.9e+04 -3.3 0.9 6 10 301 305 300 305 0.86 7 21 1.9e-08 0.0005 21.5 11.4 1 19 311 329 311 329 0.99 8 21 0.82 2.1e+04 -2.9 0.5 1 8 354 360 353 361 0.50 9 21 1.9e-07 0.0049 18.3 12.6 1 18 364 381 364 381 0.97 10 21 0.31 8e+03 -1.5 0.4 1 5 391 395 391 400 0.75 11 21 2 5.2e+04 -5.0 2.3 5 10 405 410 405 410 0.91 12 21 1.4e-06 0.036 15.6 16.7 1 18 416 433 416 434 0.98 13 21 1.6e-10 4.1e-06 28.2 14.5 1 19 443 461 443 461 0.98 14 21 0.082 2.1e+03 0.3 10.9 9 19 506 516 499 516 0.84 15 21 0.00044 11 7.6 5.7 1 11 528 537 528 538 0.95 16 21 0.32 8.4e+03 -1.6 0.9 6 10 597 601 596 601 0.90 17 21 3.5e-06 0.09 14.3 4.8 1 11 607 617 607 618 0.96 18 21 2 5.2e+04 -4.4 1.5 15 18 631 634 631 635 0.85 19 21 0.011 2.7e+02 3.2 14.6 3 18 647 662 646 663 0.91 20 21 2 5.2e+04 -5.5 2.1 9 13 669 673 668 673 0.72 21 21 2.2e-07 0.0057 18.1 12.3 1 18 714 733 714 734 0.91
Sequence Information
- Coding Sequence
- ATGGCACCTCCAACTAAGAATAAACAAGCTAAAAATCCAACAGAAAAGTTCAATGAGGCTCATGCAAGAAACATCGAAGTTGCTAAGAAGCTGGTAGAAAATTATGTATCATCTTCTGAAGAAGAGGACGAATTAGATGAGACAACAATTTTAAaATCATTATATCAGCATTACAATACGCGTACGGAAGATGCCCATATTTTGGCAAAGACAGCAGGCTTCTTAGAAAATGTTCTTCAAACTGGAGCTGCTACATGTCTTATTTGTATTGGAAGCATAAAACGGTCAAATCCAATATGGGCTTgcaaatattgttattgtttcttTCATTTGAACTGCATACGAAGATGGTCGAATGACAGTATGGCACAGGCAAAAGCCCAAACCCAAAATGAACAGGGCTACTATAATAATATGGGAGAATATGTGCCACCTAAAAAACCTAAAGCACTCCATTGGTGTTGCCCCCAGTGTAGAAGAGAATTCGGTCAAGAAGAGAGACCAACGGAATATGAATGTTTCTGTGGTAAGGAAGTCAATCCGCCATCGCAACCCTGGCTAGTGCCGCACTCCTGTGGTGAGATATGTGGTAAAGCTCTAATGCCAAATTGTGGGCATAAATGTACTTTGCTATGTCACCCCGGTCCGTGTCCACCTTGTGCCCAATACGCTATTACATCGTGTAAATGTGGAAAATCTCCTTCGAAATCAGTACGTTGTGTTGAAAAACTATGGGAATGCCAGAAGAAATGTGAATTGTTACTGCCGTGTAATGAACATCTATGTAAGAAGCTATGCCACAAATTCGGACAATGTCCGCCTTGTCAGCAAACAAGTATGCAACCATGTGAATGTGGCAGAGAAAAGGCGAAACGTCAATGTTGTGAACAGAAGTGGCATTGCAAAAAGCCTTGTGGGAAAACATTTTCTTGTGGCTTACacatgtgtaaaaaaatttgtcattcCGGTGACTGTGGGGATTGTCCTTTAAGTTTGCCACGATGCTGTCCATGTGGTAAAACCaaaaaagttGGGCCGTGTTCTGACGTGATAGATACTTGTGGCGATACTTGCCAAAAAGTACTTGCTTGTGGTTTACACACTTGTACGCAACGCTGCCACAAAGGGAATTGTAATTtgTGTTTTGtcataacaaaaaagaaatgccGCTGTGGCATGCACGAAAAAGAATTACCATGTTCCAAGGAATTTACCTGTgagacaaaatgtaaacaaGTTCGAGACTGTGGCAAACATCCGTGCAACCGTAAgTGCTGCGATGGAAATTGCCCATCATGTGACAAAGTGTGCGGTAAACCATTGTCGTGTGGCAAGCATAAGTGTCAATCGATTTGCCACAAGGGACCCTGTTATCCTTGCCagcaaaaatcccaaattaatTGTCGCTGTGGTAAATCCAAGAAGAGTGTACCCTGCGGTAGAGAGCGTACAGCACGTGTGGTTTGCTTGGAATCATGTCGCATTCCCTCAAAATGCCAACACGAGAATAAACATCGCTGTCACAAAAGTGAATGTCCTCCTTGTTCCTTACCATGCGGTTTACCAAATGACACCACCAAGTGTGGTCATAAGTGTATGGCGAAATGTCATGCATCGgttagagtaattaaaaaaccAAATTCTGATACTACGAGCATATGGGAGCCTGCCAAACAGtaTGAACTAAAACAAATGCCTCATCCGCGATGTGAACAAAAAGTAAGTGTAAGTTGTATTGGTGGACATGAAACTGCCGATTGGCCCTGTTGGAATTCTAAGCCTACATCATGTCAACGTTTGTGTAACCGGTATCTACGTTGTGGTAATCACAAATGTCCTTTAGTCTGTCATGCAGTGGCGAATTTAAATGACATGAAGGAACAAACTGGGTGTGCACCTTGTGAAGAAGGTTGCAAAATTCGTCGACCAGAAGGATGTACTCACAACTGTCCTAGACCCTGTCACCTACCCCCCTGTAATAGTTGTAATTTTGCTATAAAAACCAAATGTCATTGTGGCTTAATGCCCATTGTTTATAAGTGCAGCGATTATTTCAACACAGAAGCCAGTGAAGGTGAAATTTTGGAGAAACAAGAAAACTTGAAAAGTTGCGGAAATAGATGTTTGAAAAATTACCCTTGTGGTCATCGCTGCGCAGCCAAATGCCATTCTGGTCCTTGTCCCTATCCCGAATCTTGCCGCAAAAAGTTGCGTATCTACTGTGATTGCAAACGTTTAAAATCTGACATTTCTTGCGACAAACATCGCGCTGGTCTTCTCAAATTACAATGCGatgaaaattgtgttgaaacacaaaaaattcTGGAACAAGCACGCCAGCAAGAAGAAGAATTACGAAGGAAACAAGAAGAAGAACGCAATCGTTTAGAGGTAGAGCagtttgaaaagaaatttagcaAACGCAAAACTAAAGAACGTAAAACATTAGAAACGAAACAAAAGAATCCCGTTAACTGGAATTTAATCGGAGTTTATGCTGGTATTGCTGTGGCTGTGTTGTTAGCAGTTGCTTTAGCTTTCTATGAAGAATAA
- Protein Sequence
- MAPPTKNKQAKNPTEKFNEAHARNIEVAKKLVENYVSSSEEEDELDETTILKSLYQHYNTRTEDAHILAKTAGFLENVLQTGAATCLICIGSIKRSNPIWACKYCYCFFHLNCIRRWSNDSMAQAKAQTQNEQGYYNNMGEYVPPKKPKALHWCCPQCRREFGQEERPTEYECFCGKEVNPPSQPWLVPHSCGEICGKALMPNCGHKCTLLCHPGPCPPCAQYAITSCKCGKSPSKSVRCVEKLWECQKKCELLLPCNEHLCKKLCHKFGQCPPCQQTSMQPCECGREKAKRQCCEQKWHCKKPCGKTFSCGLHMCKKICHSGDCGDCPLSLPRCCPCGKTKKVGPCSDVIDTCGDTCQKVLACGLHTCTQRCHKGNCNLCFVITKKKCRCGMHEKELPCSKEFTCETKCKQVRDCGKHPCNRKCCDGNCPSCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVVCLESCRIPSKCQHENKHRCHKSECPPCSLPCGLPNDTTKCGHKCMAKCHASVRVIKKPNSDTTSIWEPAKQYELKQMPHPRCEQKVSVSCIGGHETADWPCWNSKPTSCQRLCNRYLRCGNHKCPLVCHAVANLNDMKEQTGCAPCEEGCKIRRPEGCTHNCPRPCHLPPCNSCNFAIKTKCHCGLMPIVYKCSDYFNTEASEGEILEKQENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPESCRKKLRIYCDCKRLKSDISCDKHRAGLLKLQCDENCVETQKILEQARQQEEELRRKQEEERNRLEVEQFEKKFSKRKTKERKTLETKQKNPVNWNLIGVYAGIAVAVLLAVALAFYEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01399151;
- 90% Identity
- -
- 80% Identity
- -