Gang021897.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Germaria angustata
Gene Symbol
nfxl1
Assembly
GCA_963681545.1
Location
OY813000.1:59266918-59270389[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3 4.5e+04 -8.1 6.4 15 19 153 157 152 157 0.82
2 20 0.19 2.9e+03 -0.3 0.4 4 10 188 194 187 194 0.95
3 20 2.5e-08 0.00038 21.7 15.6 1 18 202 218 202 219 0.98
4 20 2.8 4.2e+04 -4.0 2.3 6 10 245 249 244 249 0.88
5 20 7.7e-05 1.2 10.6 12.6 3 19 257 274 255 274 0.90
6 20 3.4e-09 5.1e-05 24.5 12.8 1 19 309 327 309 327 0.99
7 20 1.2 1.8e+04 -2.9 0.5 1 8 352 358 351 359 0.50
8 20 3.7e-08 0.00055 21.2 11.0 1 18 362 379 362 380 0.96
9 20 0.46 6.9e+03 -1.5 0.4 1 5 389 393 389 398 0.75
10 20 3 4.5e+04 -5.0 2.3 5 10 403 408 403 408 0.91
11 20 0.00016 2.4 9.6 13.1 1 18 414 431 414 432 0.98
12 20 2.4e-10 3.5e-06 28.2 14.5 1 19 441 459 441 459 0.98
13 20 0.14 2.1e+03 0.1 10.8 9 19 504 514 495 514 0.88
14 20 0.0071 1.1e+02 4.3 5.3 3 11 527 535 517 536 0.82
15 20 0.49 7.3e+03 -1.6 0.9 6 10 594 598 593 598 0.90
16 20 4.9e-06 0.073 14.4 4.5 1 11 604 614 604 615 0.96
17 20 3 4.5e+04 -4.4 1.5 15 18 628 631 628 632 0.85
18 20 0.0043 64 5.0 16.3 3 18 644 659 643 660 0.91
19 20 3 4.5e+04 -6.8 3.1 10 13 667 670 666 670 0.68
20 20 4.2e-07 0.0062 17.8 12.9 1 18 711 730 711 731 0.91

Sequence Information

Coding Sequence
atgaCGCCAATTAAAAACAGCACTAAAAATTCAACTGAAAAATTCAATGAGGCTCATGCGAGAAACATAGAAGTTGCTAAAAAGCTTGTTGAAACTTATGTTTCATCATCTGAAGATGAGGACGAATTAGACGAGACAGCCATTTTGAaatcGCTATATCAGCATTATGACAAGCGTAAGGAAGATGCACATCTATTGGCAAAGACAACAGGATTTTTAGAAAATGCTCTACAAACTGGGGCCGCTACGTGTCTTGTTTGTATTGGAAGCATAAAGCGTTCAAATGCAATATGGTCTTgcaaatattgttattgtttctttCATTTGAACTGCATTCAAAGATGGTCTAATGATAGTATGGCTCAGGCAAAAGCCCAAACTCAAAATGAGCCGGGTTACTATAATCATATGGGAGAATATGTGCCACCTAAAAAACCAAAGGCATTGCATTGGTGTTGCCCGCAATGTAGAAACGAATTCGGTCCGGAAGGGAGACCAACGGAATATGAATGCTTTTGTGGCAAAGAAATTAATCCGCCGTCACAGACCTGGTTGATTCCGCATTCTTGCGGTGAGATATGTGGTAAGGCCCTAACGCCAGATTGTGGACATAGGTGTACGTTACTATGTCACCCTGGACCGTGTCCGCCTTGTGCCCAGTATGCTATAACATCGTGTAAATGTGGAAAATCTCCTCAAAAACCCATTCGTTGTGTTGAAAAGTTATGGGAATGCCAGAAAAAATGTGATTTGTTATTACCGTGTAAGGAGCATTTATGTAAGAGAATCTGTCATAAAGTCGGACAATGTCCACCTTGCCAACAAACAAGTATGCAACAATGTGAATGTGGCAGAGAAACTGCAAAACGTAAGTGTTGTGAAAGAAAATGGCATTGTAAAAGTATGTGTGGGAAAACATTTGCATGTGGCTTACACACTTGCAAAAAAATCTGCCACTCGGGTGACTGTGGAGATTGTCCATTAAGTTTGCCCCGATCATGTCCATGTGGGAAAACTAAAAAAGTTGGGCCATGTTCGGAGGTGATAGATACTTGTGGTGATACTTGTCAAAAGGTACTAGCTTGTGGTTCACACACTTGTGCACAACGCTGTCATAAAGGAAATTGTAATTTGtGTTTGatcataacaaaaaagaaatgtcGCTGTGGCATGCATGAAAAGGAATTACCATGTTCTAAAGAATTTACTTGTGAAaccaaatgtaaacaaattcgAGACTGCGGGAAGCATCTATGCAATCGTAAGTGCTGTGATAGCAATTGCCGCCCATGTGACAAAGTATGTGGAAAACTGTTGTCCTGTGGTAAACATAAATGCCAATCGATTTGCCATAAAGGACCCTGCTATCCATGCCAGCAAAAGTCCCAAATTAATTGTCGCTGTGGTAAATCTAAAAAGAGTGTACCCTGTGGCCGAGAGCGTACAGCGCGCGTGGTTTGCTTGGAGCCATGTCGtaTTCCTTCAAAATGTCACCATGAGAATAAACATCGCTGCCATAAAAATGAATGTCCACCGTGTTCCTTGCCATGTGGATTACCAAACGACACCACCAAGTGTAATCATAAGTGTTTGGCGAAATGTCATGCAGCAGTTAGGGTAGCTAAAAAATATCCTGATACTACGAGCATATGGGAGTCAGCTAATCAGtttgaattaaaacaaatgccCCATCCACAATGTGAAGAAAAAGTGAAGGTCACTTGTATTGGTGGCCATGAAACAGCTGATTGGCCCTGCTGGAACTCAAAACCTTCATCCTGTCAACGTTTGTGTAACCGTTCTCTACGTTGTGGCAATCACAAATGTGCTTTAGTCTGTCATGCAGTGGCAAATTTAGAAGATATGGaggaaCAAACTGGCTGTGCTCCATGTGAAAGTGGTTGCGAAATTCCCCGACCCAAGGGATGTACTCATAAGTGCCCTAGACCCTGTCATCTGCCCCCTTGTAATCCTTGCAATTTTGTCATTAAAACTAAATGCCATTGCGGCTTAATGTCGATTATTTTCAAATGCAGCGATTATTTCAATACGGAAGGCAGTGAAGGTGAAATTCTGGAGAAACAAGAAAACTTAAGAAGTTGTGGAAAccgttgtttaaaaaattacCCGTGTGGCCATAGATGTACAGCCAAATGTCATTCAGGCCCTTGTCCCTACCCCGAATCTTGTCGCAAAAAAGTGCGTATCAACTGTGATTGCAAACGTTTAAAGTTGGAAATTTCTTGCGACAAATATCGAGGTGGACTTTTAAAATTGCAGTGTGATGAAAATTGTTTAGAAACACAAAAAGTTCTTGAACAAGCACGACGCACAGAAGaggaattaaaaagaaaaaaagaggacGAACGAAATCGTCTAGAGGTGGAAcagtttgagaaaaaatttaacaagcgCAAACCTAAAGAACGCAAAACATTTGAGGTGAAACAAAAGAATCCCATTAAATGGAACCTTATTGGTGTTTATGTTGGTATTGCTGCTGCTGTGTTGTTAGCAATTGCTTTAGCTTTTTATGAGGATCGTTAA
Protein Sequence
MTPIKNSTKNSTEKFNEAHARNIEVAKKLVETYVSSSEDEDELDETAILKSLYQHYDKRKEDAHLLAKTTGFLENALQTGAATCLVCIGSIKRSNAIWSCKYCYCFFHLNCIQRWSNDSMAQAKAQTQNEPGYYNHMGEYVPPKKPKALHWCCPQCRNEFGPEGRPTEYECFCGKEINPPSQTWLIPHSCGEICGKALTPDCGHRCTLLCHPGPCPPCAQYAITSCKCGKSPQKPIRCVEKLWECQKKCDLLLPCKEHLCKRICHKVGQCPPCQQTSMQQCECGRETAKRKCCERKWHCKSMCGKTFACGLHTCKKICHSGDCGDCPLSLPRSCPCGKTKKVGPCSEVIDTCGDTCQKVLACGSHTCAQRCHKGNCNLCLIITKKKCRCGMHEKELPCSKEFTCETKCKQIRDCGKHLCNRKCCDSNCRPCDKVCGKLLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCSLPCGLPNDTTKCNHKCLAKCHAAVRVAKKYPDTTSIWESANQFELKQMPHPQCEEKVKVTCIGGHETADWPCWNSKPSSCQRLCNRSLRCGNHKCALVCHAVANLEDMEEQTGCAPCESGCEIPRPKGCTHKCPRPCHLPPCNPCNFVIKTKCHCGLMSIIFKCSDYFNTEGSEGEILEKQENLRSCGNRCLKNYPCGHRCTAKCHSGPCPYPESCRKKVRINCDCKRLKLEISCDKYRGGLLKLQCDENCLETQKVLEQARRTEEELKRKKEDERNRLEVEQFEKKFNKRKPKERKTFEVKQKNPIKWNLIGVYVGIAAAVLLAIALAFYEDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01399151;
90% Identity
-
80% Identity
-