Esuc013137.1
Basic Information
- Insect
- Epicampocera succincta
- Gene Symbol
- nfxl1
- Assembly
- GCA_932527255.1
- Location
- CAKOBP010000061.1:2335256-2339098[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.9e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 21 0.13 1.3e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 21 1.7e-08 0.00016 21.7 16.8 1 19 206 223 206 223 0.98 4 21 1.9 1.8e+04 -4.0 2.3 6 10 249 253 248 253 0.88 5 21 0.00023 2.2 8.5 11.9 3 19 261 278 259 278 0.90 6 21 1.1 1.1e+04 -3.3 0.9 6 10 303 307 302 307 0.86 7 21 2.3e-09 2.2e-05 24.4 12.8 1 19 313 331 313 331 0.99 8 21 1.7 1.6e+04 -3.9 0.8 6 10 356 360 355 362 0.54 9 21 1e-07 0.00097 19.2 11.6 1 18 366 383 366 384 0.96 10 21 0.21 2.1e+03 -1.0 0.5 1 5 393 397 393 402 0.75 11 21 2 1.9e+04 -5.0 2.3 5 10 407 412 407 412 0.91 12 21 0.00015 1.4 9.1 16.5 1 18 418 435 418 436 0.98 13 21 1.6e-10 1.5e-06 28.2 14.5 1 19 445 463 445 463 0.98 14 21 0.095 9.2e+02 0.1 10.8 9 19 508 518 499 518 0.88 15 21 0.011 1.1e+02 3.1 4.4 4 11 532 539 530 540 0.91 16 21 1.3 1.2e+04 -3.5 1.0 6 10 599 603 598 603 0.83 17 21 6.4e-06 0.062 13.5 4.4 1 11 609 619 609 620 0.96 18 21 2 1.9e+04 -4.7 4.2 5 10 635 640 633 640 0.86 19 21 0.0037 36 4.6 14.9 3 19 649 665 648 665 0.92 20 21 2 1.9e+04 -6.8 3.1 10 13 672 675 671 675 0.68 21 21 1.8e-07 0.0018 18.4 10.6 1 16 716 730 716 736 0.92
Sequence Information
- Coding Sequence
- ATGCCGCCAATAAAAAACAAACAACAGATTAGCACCAAGAATTCAACAGAAAAGTTCAATGAAGCTCATGCGAGAAACATAGAAGTTGCCAAGAAGCTTGTTGAAAATTATATATCGTCTTCTGAGGATGAAGAGGAGTTGGATGAAACTTCAATATTGAAATCGCTATATCAACATTATGACAAACGCAAGGAAGATGCACATCTTTTAGCCAAGACAGCAGGCTTTTTAGAAAATGTTCTGCAGACTGGAGCTGCTACGTGTCCCATTTGTATTGGGAGCATAAAGCGGTCGACAGCGGTATGGTCATGCAAATTTTGTTATTGCTTCTTTCATTTGAACTGCATACAAAGATGGTCCAATGACAGTTTAGCGCAAGCTAAAGCAAAAACCCAACATGAACAGGGCTACTATAATAATATGGGAGAATATGTGCCGCCCAAAAAGGTCAAAGCATTACACTGGTGTTGCCCGCAATGTCGAAAAGAATTTCGGCCTGAAGACAGACCAATGGAATATGAATGCTTTTGTGGAAAGGAAATAAATCCACCAGCGCAACTATGGCTAGTCCCTCATTCTTGCGGTGAAATTTGCGCCAAAGATTTAACTCCAAACTGTGGCCATAAATGCACACTTTTATGCCATCCTGGCCCATGCCCACCTTGTTCTCAGTACGCTGTTACAACCTGCAAATGTGGAAAGTCACCAAAAAAGTCTGTACGTTGTGTCGACAAATTGTGGGAGTGTCAGAAAAAGTGCGAACTCTTGCTGCCGTGTAAGGAGCATGTTTGCAAAATGATATGTCACAAAGTTGGACAATGTCCACCTTGCCAGCGAACTAGTATGCAATCTTGTGAATGTGGCACAGAAACGGCGAAAAGAAAATGTTGCGATTTGAAATGGCATTGCAAAAAGCCATGCGAAAGAACTTTATCTTGCGGCTTACACACTTGCAAGAAAATTTGCCATTCAGGTGACTGTGGAGACTGCCCCTTGAGTTTGCCGCGTTTTTGTCCGTGTGGTAAAAGTAAAAAAATTGGCCCTTGCTCTGAGGTTATAGACACTTGTGGTGATACTTGTCAAAAAAAATTGGCCTGTGGTTCCCATACGTGTACTCAACGCTGTCATAACGGAAATTGCAATTTGTGTTTACTGATCACGAAAAAGAAATGCCGTTGTGGAATCCATGAAAAGGAACTACCATGTTCGAAGGAATTCACTTGCGAAACGAAATGTAAACAAATTCGTGACTGTGGCAAACATCCATGCAATCGTAAGTGCTGCGATAGAAATTGTCCACCGTGTGATAAGGTTTGTGGCAAACCATTATCGTGCGGCAAGCACAAATGTCAATCCATTTGCCACAAAGGACCCTGTTATCCTTGCCAGCAAAAATCTCAAATCAATTGTCGTTGTGGCAAGACCCAAAAAAGCGTCCCCTGTGGCCGAGAACGGACTGCTCGTGTGGTTTGTTTAGAGCCATGCCGTATCCCTTCAAAGTGTCATCATGAGAACAAACATCGCTGTCATAAAAATGAATGTCCACCATGTTCCTTGCCCTGTGGATTGCCGAATGATACAACCAAATGTTTTCATAAGTGTATGGCAAAATGTCACGCATCAGTAAGAGTAACCAAAAAATCAAAGCACGATACTACTAGCGCTTGGGAGCTTAGCAAACAGTTCGAATTCAAGAAAATGCCTCATCCGAGGTGTGAGCAAAACGTAAGCTGTTATTGCATTGGTGGGCATGAAATACTCGATTGGCCTTGTTGGAATTCTATACCTACCTCTTGCCAGCGTTCGTGCAACCGTTCTCTAAGTTGTGGCAATCATAAATGTGCTTTGATCTGCCATGCAGTGGCAAACTTGGAGGACATGAATGCGCAAATTGGCTGCTCAACCTGCGAGGAAAGTTGCAAAATTCCTCGGCCGGAAGGATGTACTCATTATTGCCCGCGTCCGTGTCATCTGCCTCCATGCAATCCTTGTAGTGCTGTTATAAAAACTAAATGCCACTGTGGCTTAATGATAATTTCTTACAAATGCAGCGATTATTTCTACATTGAAGCCACTGAAGGAGAAATTTTAGAAAAACGAGAAAATCTAAAAAGTTGCGGCGATAGATGTTTAAAAAATTACCCTTGCGGTCATCGTTGCGCAGCCAAATGTCATTCTGGTCCTTGTCCTTATCCCGAATTTTGCCGCAAAAAATTACGTATATATTGCGATTGTAAACGCTTGAAATCCGAAATTTCTTGCGACAAACATCGCGCCGGACTTTTGAAATTGGAATGCGATCGAAATTGCATTGTGACACAAAAAAATCTAGAACAAGCACGTCAACAAGAAGAAGAATTAAAACGAAAACAGGAAGAAGAACGCAATCGCTTAGAAGTGGAACAGTTCGAAAAGAAGTTCAGTAAACGCAAACCCAAAGAACGTAAGACTGTAGAAGTGAAACAAAAAAGTTCTATTAACTGGAATCTAGTTGGGTTATATGCTGGTATTGCAGCTGCTGTGCTGTTAGCTGTAGCTCTGGCTTTTTACGAAGATCGTTAG
- Protein Sequence
- MPPIKNKQQISTKNSTEKFNEAHARNIEVAKKLVENYISSSEDEEELDETSILKSLYQHYDKRKEDAHLLAKTAGFLENVLQTGAATCPICIGSIKRSTAVWSCKFCYCFFHLNCIQRWSNDSLAQAKAKTQHEQGYYNNMGEYVPPKKVKALHWCCPQCRKEFRPEDRPMEYECFCGKEINPPAQLWLVPHSCGEICAKDLTPNCGHKCTLLCHPGPCPPCSQYAVTTCKCGKSPKKSVRCVDKLWECQKKCELLLPCKEHVCKMICHKVGQCPPCQRTSMQSCECGTETAKRKCCDLKWHCKKPCERTLSCGLHTCKKICHSGDCGDCPLSLPRFCPCGKSKKIGPCSEVIDTCGDTCQKKLACGSHTCTQRCHNGNCNLCLLITKKKCRCGIHEKELPCSKEFTCETKCKQIRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKTQKSVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCSLPCGLPNDTTKCFHKCMAKCHASVRVTKKSKHDTTSAWELSKQFEFKKMPHPRCEQNVSCYCIGGHEILDWPCWNSIPTSCQRSCNRSLSCGNHKCALICHAVANLEDMNAQIGCSTCEESCKIPRPEGCTHYCPRPCHLPPCNPCSAVIKTKCHCGLMIISYKCSDYFYIEATEGEILEKRENLKSCGDRCLKNYPCGHRCAAKCHSGPCPYPEFCRKKLRIYCDCKRLKSEISCDKHRAGLLKLECDRNCIVTQKNLEQARQQEEELKRKQEEERNRLEVEQFEKKFSKRKPKERKTVEVKQKSSINWNLVGLYAGIAAAVLLAVALAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01399151;
- 90% Identity
- -
- 80% Identity
- -